Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001637-TA|BGIBMGA001637-PA|IPR006818|Anti-silencing
protein, ASF1-like
(216 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 182 5e-47
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 27 2.1
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo... 27 2.8
SPAC22F8.12c |shf1||small histone ubiquitination factor Shf1|Sch... 26 4.9
SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyc... 26 4.9
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 25 6.4
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 25 6.4
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 8.5
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 182 bits (442), Expect = 5e-47
Identities = 90/195 (46%), Positives = 124/195 (63%), Gaps = 4/195 (2%)
Query: 1 MAKVHITNVVVLDNPSPFLNPFQFELTFECIEELKEDLEWKMIYVGSAETEEHDQVLDTI 60
M+ V+I +V VL+NP+ F +P++FE+TFEC+E LK DLEWK+ YVGSA ++ +DQ+LDT+
Sbjct: 1 MSIVNILSVNVLNNPAKFSDPYKFEITFECLEPLKSDLEWKLTYVGSATSQSYDQILDTL 60
Query: 61 YVGPIPEGRHMFVFQAPPPDVTKIPE-NDALGVTVVLLTCSYRGQEFVRVGYFINND--- 116
VGPIP G + FVF+A PP++ +P+ +D LGVTV+LL+C+Y EFVRVGY++NN+
Sbjct: 61 LVGPIPIGINKFVFEADPPNIDLLPQLSDVLGVTVILLSCAYEDNEFVRVGYYVNNEMEG 120
Query: 117 YSESEPELRENTPAKPQFDKVVRNILASAPRVTRFKINWAEPDAGTAIDAGDSNLEISHA 176
+ E + E K KV R+ILA PRVTRF I W PD A E
Sbjct: 121 LNLQEMDDAEIKKVKVDISKVWRSILAEKPRVTRFNIQWDNPDFDDAPPVQPDADEEEEE 180
Query: 177 PSNDSYSASFNAESQ 191
D F+ E +
Sbjct: 181 EEADEMEEEFDEEGE 195
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 160 AGTAIDAGDSNLEISHAPS--NDSYSASFNAESQISGIEFQGSLSGYGDNSNS 210
+G++ D DS+ S + S NDS S+S ++ES+ S + S S S S
Sbjct: 105 SGSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESES 157
>SPAC26H5.07c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 505
Score = 26.6 bits (56), Expect = 2.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 154 NWAEPDAGTAIDAGDSNLEISH--APSNDSYSASFNAESQISGIEFQGSLSG 203
N+ + +AG D D L + + AP + YSA+ +AES +S +++ SG
Sbjct: 94 NYEDIEAGVCKD-DDYGLYLINQTAPHDSIYSAAVDAESMVSPLKYPVEQSG 144
>SPAC22F8.12c |shf1||small histone ubiquitination factor
Shf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 165
Score = 25.8 bits (54), Expect = 4.9
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 111 YFINNDYSESEPELRENTPAKPQFDKVVRNILASAPRVTRFKINWAEPDAGTAIDAGDSN 170
++ ND+ P L+ N ++ R+ + R + ++ P + T +S
Sbjct: 9 HYDGNDHQYRSP-LKSNVDQNSFYESSYRSRQSYHQRTKTPRSSYDSPSSSTNSKEHNSP 67
Query: 171 LEISHAPSNDSYSASFNAESQISGIE 196
PSN+S ASF A S + +E
Sbjct: 68 YHY-RVPSNNSTRASFGAASTDTNVE 92
>SPAC23G3.03 |sib2||ornithine N5 monooxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 431
Score = 25.8 bits (54), Expect = 4.9
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Query: 51 EEHDQVLDTIYVGPIPEGRHMFVFQAPPPDVTKIPENDALGVTVVLLTCSYRGQEFVRVG 110
E H + DT EG H+ V D +K PE + V V + + +
Sbjct: 299 EFHQIMGDTDIQSIKNEGDHLVVQLTSQMDKSKKPETRKIDVLYVATGYDHESFDVLMSS 358
Query: 111 YFINNDYSE-SEPELRENTPAKPQFDKVVRNILASAPRVTRFKINWAEPDAG 161
F N+ ++ SE N P+K Q V I ++ + ++WA AG
Sbjct: 359 LFPNSQGAQISEEYCVLNAPSK-QGKVYVAGITSNQHGIGETLLSWAAIRAG 409
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 25.4 bits (53), Expect = 6.4
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 10 VVLDNPSPFLNPFQFELTFECIEELKEDLEWKM 42
++L P FE+T ++ + D+EWK+
Sbjct: 244 IILSEAGPRFEMKLFEITLGTVDMVDADVEWKL 276
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 25.4 bits (53), Expect = 6.4
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 119 ESEPELRENTPAKPQFDKVVRNILASAPRVTRFKINWAEPDAGTAIDAGDSNLEISHAPS 178
E+ P + + +P + + + V NI S PR + + E A +DA + + SHA S
Sbjct: 640 ETSPTVFQTSPEEDKEN--VNNIKISQPRNSLQTNGYIEGMANNVLDASFNVEDESHAIS 697
Query: 179 NDSYSASFNAESQISGIEFQGSLSGYGDNSNSIAP 213
+ +S I +E Y + ++ P
Sbjct: 698 DSELGYFCEDQSNIYEVEDMRYYLFYTEEEKNMLP 732
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 8.5
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 135 DKVVRNILASAPRVTRFKINWAEPDAGTAIDAGDSNLEISH--APSNDSYSASFNAES 190
D V + AP ++ + EP+ +I A D N S+ PS+ YS S S
Sbjct: 381 DSPVNEVEPMAPELSSAVVEKKEPEDYESISAVDENTNDSNESLPSSHDYSESTKENS 438
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.134 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,101,250
Number of Sequences: 5004
Number of extensions: 48435
Number of successful extensions: 95
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 88
Number of HSP's gapped (non-prelim): 10
length of query: 216
length of database: 2,362,478
effective HSP length: 70
effective length of query: 146
effective length of database: 2,012,198
effective search space: 293780908
effective search space used: 293780908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 52 (25.0 bits)
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