Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001637-TA|BGIBMGA001637-PA|IPR006818|Anti-silencing
protein, ASF1-like
(216 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75525-3|CAA99762.3| 245|Caenorhabditis elegans Hypothetical pr... 178 3e-45
U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical pr... 176 1e-44
AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical ... 30 1.5
Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z80219-5|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical pr... 27 7.8
AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP ... 27 7.8
AF016428-5|AAK71397.1| 459|Caenorhabditis elegans Hypothetical ... 27 7.8
>Z75525-3|CAA99762.3| 245|Caenorhabditis elegans Hypothetical
protein C03D6.5 protein.
Length = 245
Score = 178 bits (433), Expect = 3e-45
Identities = 79/158 (50%), Positives = 110/158 (69%), Gaps = 2/158 (1%)
Query: 2 AKVHITNVVVLDNPSPFLNPFQFELTFECIEELKEDLEWKMIYVGSAETEEHDQVLDTIY 61
++V+I V +LDNP+ F++ F+ E+TFE E L DLEW+++YVGS + + DQVLD+
Sbjct: 3 SRVNIVQVQILDNPAMFVDKFKMEITFEVFEHLPHDLEWELVYVGSGTSRDFDQVLDSAL 62
Query: 62 VGPIPEGRHMFVFQAPPPDVTKIPENDALGVTVVLLTCSYRGQEFVRVGYFINNDYSESE 121
VGPIPEGRH FVF A PD++KIP D +GV+V+LL C Y QEF+ +G+F+ N+Y++
Sbjct: 63 VGPIPEGRHKFVFDAEHPDISKIPVEDIVGVSVLLLRCKYNDQEFINMGWFVANEYTDE- 121
Query: 122 PELRENTPAKPQFDKVVRNILASAPRVTRFKINWAEPD 159
EL+EN PAKP +K+ R I RVT F I W + D
Sbjct: 122 -ELKENPPAKPLIEKLSRKIETEDLRVTTFPIRWTDED 158
>U40029-8|AAA81128.2| 275|Caenorhabditis elegans Hypothetical
protein F10G7.3 protein.
Length = 275
Score = 176 bits (428), Expect = 1e-44
Identities = 76/158 (48%), Positives = 111/158 (70%), Gaps = 2/158 (1%)
Query: 2 AKVHITNVVVLDNPSPFLNPFQFELTFECIEELKEDLEWKMIYVGSAETEEHDQVLDTIY 61
++V+I V +LDNP+ F++ F+ E+TFE E L DLEW+++YVGS + + DQVLD+
Sbjct: 3 SRVNIVQVQILDNPAMFVDKFKLEITFEVFEHLPHDLEWELVYVGSGTSRDFDQVLDSAL 62
Query: 62 VGPIPEGRHMFVFQAPPPDVTKIPENDALGVTVVLLTCSYRGQEFVRVGYFINNDYSESE 121
VGPIPEGRH FVF A PD++KIP +D +GV+V+LL C Y QEF+ +G+F+ N+Y+E
Sbjct: 63 VGPIPEGRHKFVFDADHPDISKIPVDDIVGVSVLLLRCKYNDQEFINMGWFVANEYTEE- 121
Query: 122 PELRENTPAKPQFDKVVRNILASAPRVTRFKINWAEPD 159
EL+EN P++P +K+ R + R+T F I W + D
Sbjct: 122 -ELKENPPSQPLIEKLSRKVETEDLRITTFPIRWTDED 158
>AL117205-5|CAB55163.1| 456|Caenorhabditis elegans Hypothetical
protein Y116A8A.6 protein.
Length = 456
Score = 29.9 bits (64), Expect = 1.5
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 118 SESEPELRENTPAKPQFDKVVRNILASAPRVTRFKINWAEPDAGTAIDAGDSNLEISHAP 177
+ S+PE++ P + Q + + L ++ VT + PD T +D GD + I
Sbjct: 361 ASSKPEVQTTIPTEIQTPSLRTSSLKTSTTVTTTTVTTTTPDPAT-VDYGDDHDMIGLVD 419
Query: 178 SNDSYSASFNAESQISGI--EFQGSLSGY 204
+D + S N ++ I +F+ LS +
Sbjct: 420 EDDEITESNNRAHRMDLILGQFEFFLSSF 448
>Z83117-4|CAB05572.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5 protein.
Length = 2032
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 59 TIYVGPIPEGRHMFVFQAPPPDVTKIPENDALGVT 93
TI G + E R+M + P DV+ IP+ + VT
Sbjct: 1784 TICGGYVSEERNMMLLSPKPSDVSGIPQQRLMSVT 1818
>Z80219-5|CAB02303.2| 2032|Caenorhabditis elegans Hypothetical protein
T01H8.5 protein.
Length = 2032
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 59 TIYVGPIPEGRHMFVFQAPPPDVTKIPENDALGVT 93
TI G + E R+M + P DV+ IP+ + VT
Sbjct: 1784 TICGGYVSEERNMMLLSPKPSDVSGIPQQRLMSVT 1818
>AJ276020-1|CAC81668.1| 1971|Caenorhabditis elegans putative TRP
homologous cationchannel protein.
Length = 1971
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 59 TIYVGPIPEGRHMFVFQAPPPDVTKIPENDALGVT 93
TI G + E R+M + P DV+ IP+ + VT
Sbjct: 1723 TICGGYVSEERNMMLLSPKPSDVSGIPQQRLMSVT 1757
>AF016428-5|AAK71397.1| 459|Caenorhabditis elegans Hypothetical
protein T05C3.6 protein.
Length = 459
Score = 27.5 bits (58), Expect = 7.8
Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 14/130 (10%)
Query: 33 ELKEDLE--WKMIYVGSAETEEHDQVLDTI--YVGPI----PEGRHMFVFQAPPPDVTKI 84
+LK LE W M G+ ++ D L T + P+ P G A PP
Sbjct: 197 DLKNLLEIYWNMGAPGATIPKQWDNSLSTPANHQSPMSVFQPTGSQAMYISASPPGFQAC 256
Query: 85 PENDALGVTVVLLTCSYRGQEFVRVGYFINNDYSESEPELRENTPAKPQFDKVVRNILAS 144
D L T ++ T QE++ Y DYS S L+ KP+ D +R
Sbjct: 257 GREDDL--TSMIKTID-EAQEYL---YMAVMDYSPSTLYLKNANKWKPELDNAIRRAAFE 310
Query: 145 APRVTRFKIN 154
RF ++
Sbjct: 311 RAVHVRFMVS 320
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.134 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,907,480
Number of Sequences: 27539
Number of extensions: 260546
Number of successful extensions: 496
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 489
Number of HSP's gapped (non-prelim): 7
length of query: 216
length of database: 12,573,161
effective HSP length: 79
effective length of query: 137
effective length of database: 10,397,580
effective search space: 1424468460
effective search space used: 1424468460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
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