GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001637-TA|BGIBMGA001637-PA|IPR006818|Anti-silencing
protein, ASF1-like
         (216 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   3.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   5.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.9  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)

Query: 22  FQFELTFECIEELKEDLEWKMIYVGSAETE 51
           F+  L  EC  E+K+ L +K++   +A +E
Sbjct: 464 FRINLGIECGYEIKKLLRYKLLISQNAVSE 493


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 12/51 (23%), Positives = 24/51 (47%)

Query: 75  QAPPPDVTKIPENDALGVTVVLLTCSYRGQEFVRVGYFINNDYSESEPELR 125
           QAPP    K+    A      +L C  +G++ + + + +NN   + + + R
Sbjct: 774 QAPPHFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSR 824


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query: 112 FINNDYSESEPELR 125
           FINNDY+ +E   R
Sbjct: 555 FINNDYNFNEVNFR 568


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.134    0.395 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,804
Number of Sequences: 429
Number of extensions: 2861
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 216
length of database: 140,377
effective HSP length: 55
effective length of query: 161
effective length of database: 116,782
effective search space: 18801902
effective search space used: 18801902
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 42 (21.0 bits)