Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001636-TA|BGIBMGA001636-PA|undefined
(640 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g19900.1 68418.m02368 PRLI-interacting factor, putative stron... 42 0.001
At1g28400.1 68414.m03492 expressed protein similar to E6 (GI:100... 36 0.11
At1g54840.2 68414.m06258 expressed protein 33 0.44
At1g54840.1 68414.m06257 expressed protein 33 0.44
At3g48050.2 68416.m05239 bromo-adjacent homology (BAH) domain-co... 33 0.58
At3g48050.1 68416.m05238 bromo-adjacent homology (BAH) domain-co... 33 0.58
At4g29950.2 68417.m04261 microtubule-associated protein identica... 31 1.8
At4g29950.1 68417.m04260 microtubule-associated protein identica... 31 1.8
At4g00440.1 68417.m00061 expressed protein 31 2.3
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 31 3.1
At2g46550.1 68415.m05807 expressed protein 30 5.4
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 30 5.4
At5g23450.2 68418.m02752 diacylglycerol kinase family protein co... 29 7.2
At5g23450.1 68418.m02751 diacylglycerol kinase family protein co... 29 7.2
At5g17270.1 68418.m02023 tetratricopeptide repeat (TPR)-containi... 29 7.2
At2g22795.1 68415.m02704 expressed protein 29 7.2
At1g50600.1 68414.m05683 scarecrow-like transcription factor 5 (... 29 7.2
At2g34300.1 68415.m04196 dehydration-responsive protein-related ... 29 9.5
>At5g19900.1 68418.m02368 PRLI-interacting factor, putative strong
similarity to PRLI-interacting factor A [Arabidopsis
thaliana] GI:11139262
Length = 494
Score = 41.9 bits (94), Expect = 0.001
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 11/125 (8%)
Query: 394 NHYSQSQTQNFVIGEKLI----QNIDTRNKNRQI---DVTLCDNNKEFINQNNDVTDCLF 446
+H +Q + +N + E+L + D R + + + D+ D N+E + +N +D
Sbjct: 317 SHIAQLEEENLTLKERLFLMERELGDMRRRLQYLERRDMVAQDANEEVV-ENESESDG-- 373
Query: 447 SSTDSSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNGDS-DSMKAQKEAVPF 505
T S+ RT+ K + A D + DNE ++ NN N S D +KA K++V
Sbjct: 374 DDTGGSDARTSGETKENHVAAEDVCMQDVAARDNEAVVKENNNNSKSVDEVKANKQSVGV 433
Query: 506 KVIGE 510
GE
Sbjct: 434 GSSGE 438
>At1g28400.1 68414.m03492 expressed protein similar to E6
(GI:1000090) [Gossypium barbadense]
Length = 335
Score = 35.5 bits (78), Expect = 0.11
Identities = 40/188 (21%), Positives = 76/188 (40%), Gaps = 16/188 (8%)
Query: 322 TLNELDNTRDDYLSQSTFHESSQDRVPSQSEDPSHCAQNPNEEFISRCAKKTKCINLIDS 381
T+ E + + TF S + + ++ N N+E + K + +N
Sbjct: 57 TVEESVLNKKEQEQDPTFVPESGNGYGLYGHETTYNNNNDNKEEFNNNNKNDEKVNSKTF 116
Query: 382 QETIICSLPESFNHYSQS---QTQNFVIGEKLIQNIDTRNKNRQIDVTLCDNNKEFINQN 438
+ ESFN+Y ++ +T+N+ G K N + N N + D +EF N
Sbjct: 117 STPSLSETEESFNNYEENYPKKTENY--GTKGYNNEEFNNNNNKYDANF---KEEF---N 168
Query: 439 NDVTDCLFSSTDSSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNGDSDSMKA 498
N+ D ++ + +N N N+ N D E +N + + N N ++ +
Sbjct: 169 NNKYDENYAKEEFNNNN----NNNNYNYKYDENVKEESFPENNEDNKKNVYNSNAYGTEL 224
Query: 499 QKEAVPFK 506
++E P+K
Sbjct: 225 ERE-TPYK 231
>At1g54840.2 68414.m06258 expressed protein
Length = 268
Score = 33.5 bits (73), Expect = 0.44
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 76 YFEVARHD--RD--LYIKVHPRHIRPVRHMKHKYSLAIAIAVLKTKPENVTTDEHLANIK 131
YF R+D RD L++ + PR + P H++HK+ +I + + +E +A K
Sbjct: 110 YFNAKRNDSNRDYPLFVDLFPRKLHPETHVRHKFKFIRSIVFINDPDTSCMREECVARFK 169
Query: 132 Q 132
+
Sbjct: 170 R 170
>At1g54840.1 68414.m06257 expressed protein
Length = 349
Score = 33.5 bits (73), Expect = 0.44
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 76 YFEVARHD--RD--LYIKVHPRHIRPVRHMKHKYSLAIAIAVLKTKPENVTTDEHLANIK 131
YF R+D RD L++ + PR + P H++HK+ +I + + +E +A K
Sbjct: 110 YFNAKRNDSNRDYPLFVDLFPRKLHPETHVRHKFKFIRSIVFINDPDTSCMREECVARFK 169
Query: 132 Q 132
+
Sbjct: 170 R 170
>At3g48050.2 68416.m05239 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 33.1 bits (72), Expect = 0.58
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 439 NDVTDCLFSSTDSSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNG 491
++ +C ++ D+S+ A+ + +A ++F NE GD+ K SNN +G
Sbjct: 1102 DEAGECTSAARDASSVSAAASAGSEMDARVEFDLNEGFDGDDAKHGDSNNFSG 1154
>At3g48050.1 68416.m05238 bromo-adjacent homology (BAH)
domain-containing protein contains Pfam profile PF01426:
BAH domain
Length = 1613
Score = 33.1 bits (72), Expect = 0.58
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 439 NDVTDCLFSSTDSSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNG 491
++ +C ++ D+S+ A+ + +A ++F NE GD+ K SNN +G
Sbjct: 1102 DEAGECTSAARDASSVSAAASAGSEMDARVEFDLNEGFDGDDAKHGDSNNFSG 1154
>At4g29950.2 68417.m04261 microtubule-associated protein identical
to microtubule-associated protein GI:5032258 from
[Arabidopsis thaliana]; similar to TBC1 domain family
member 5 (Swiss-Prot:Q92609) [Homo sapiens]; contains
Pfam profile PF00566: TBC domain
Length = 703
Score = 31.5 bits (68), Expect = 1.8
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 294 NDRIEVGLQNNFIYPQKQNEEFL--SDVLRTLNELDNTRDDYLSQSTF-HESSQDRVPSQ 350
N E + + + + ++ F + LR N ++N D + F E+ +DR S
Sbjct: 453 NTDFETAAEESIVMEENSSDLFSDPNSPLRDSNYIENDSDSSNESNLFPDETVKDRETSV 512
Query: 351 SEDPSHCAQNPNEEFISRCAKKTKCINLIDSQETIICSLPESFNHYSQSQTQNFVIGEKL 410
+ P + P+ EFI +K + +++DS + S P +QS ++ +K
Sbjct: 513 VDSPLSISSQPSMEFIVSLSKDQE-TSVVDS-PLPVSSQPSIEFPVTQSNDEDNA-ADKS 569
Query: 411 IQNIDTRNK 419
+ NI R+K
Sbjct: 570 VANIKERSK 578
>At4g29950.1 68417.m04260 microtubule-associated protein identical
to microtubule-associated protein GI:5032258 from
[Arabidopsis thaliana]; similar to TBC1 domain family
member 5 (Swiss-Prot:Q92609) [Homo sapiens]; contains
Pfam profile PF00566: TBC domain
Length = 828
Score = 31.5 bits (68), Expect = 1.8
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 294 NDRIEVGLQNNFIYPQKQNEEFL--SDVLRTLNELDNTRDDYLSQSTF-HESSQDRVPSQ 350
N E + + + + ++ F + LR N ++N D + F E+ +DR S
Sbjct: 578 NTDFETAAEESIVMEENSSDLFSDPNSPLRDSNYIENDSDSSNESNLFPDETVKDRETSV 637
Query: 351 SEDPSHCAQNPNEEFISRCAKKTKCINLIDSQETIICSLPESFNHYSQSQTQNFVIGEKL 410
+ P + P+ EFI +K + +++DS + S P +QS ++ +K
Sbjct: 638 VDSPLSISSQPSMEFIVSLSKDQE-TSVVDS-PLPVSSQPSIEFPVTQSNDEDNA-ADKS 694
Query: 411 IQNIDTRNK 419
+ NI R+K
Sbjct: 695 VANIKERSK 703
>At4g00440.1 68417.m00061 expressed protein
Length = 831
Score = 31.1 bits (67), Expect = 2.3
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Query: 278 DNVTSEHQVFDAPAFQNDRIEVGLQNNFIYPQKQNEEFLSDVLRTLNELDNTRDDYLSQS 337
D +E +F A + + I L P++ + + D L + D RD S+
Sbjct: 509 DETANEDNMFSAGSADDVMIPNELDE---VPEEASSTLIGD-LSKVEAQDEQRDSINSKQ 564
Query: 338 TFHESSQDRVPSQSEDPSHCAQNPNE 363
T E SQ + S PSHC E
Sbjct: 565 TSLEESQPPLSSSVASPSHCLAQTEE 590
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 30.7 bits (66), Expect = 3.1
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 451 SSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNGDSDSMKAQKEAVPFKVIGE 510
++ + K+ SN +D + EK I SNN + D D+ K QK A P + +
Sbjct: 314 NNEDHKSKKKKSKSNTNVDQVETKKKEEHKEKTIPSNNDD-DDDAEKKQKRATPKEELDA 372
Query: 511 INKVKT 516
I+ +T
Sbjct: 373 IDDAET 378
>At2g46550.1 68415.m05807 expressed protein
Length = 397
Score = 29.9 bits (64), Expect = 5.4
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 309 QKQNEEFLSDVLRTLNELDNTRDDYLSQSTFHESSQDRVPSQSEDPS 355
+KQ + F S+ + EL TR+ Y + + ESS+ ++ S DPS
Sbjct: 123 EKQGKSFNSESFQEFIELMETRESY-GSTGYDESSEKKLSELSFDPS 168
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 29.9 bits (64), Expect = 5.4
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 448 STDSSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNGDSDSMKAQKEAV--PF 505
ST S+N ++ N N++ ++I F I G+NE ++ + + V PF
Sbjct: 449 STSSNNNNGSNTNNNNNASSILRSFGSGIYGENESNLQDLMNSFSNPGATGNVNGVDSPF 508
Query: 506 KVIGEINK 513
G +NK
Sbjct: 509 GSYGGVNK 516
>At5g23450.2 68418.m02752 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 763
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 568 DDERSLKKSSITEIWRKKWIPNYGDVVSTSDVTEKVCIEIRCSEVL 613
D E L+K SIT I+ KW+ G + V C ++ S+V+
Sbjct: 624 DIETGLRKQSITPIFEDKWVSRKGHFLGIM-VCNHACRTVQSSQVV 668
>At5g23450.1 68418.m02751 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 763
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 568 DDERSLKKSSITEIWRKKWIPNYGDVVSTSDVTEKVCIEIRCSEVL 613
D E L+K SIT I+ KW+ G + V C ++ S+V+
Sbjct: 624 DIETGLRKQSITPIFEDKWVSRKGHFLGIM-VCNHACRTVQSSQVV 668
>At5g17270.1 68418.m02023 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 899
Score = 29.5 bits (63), Expect = 7.2
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 391 ESFNHYSQSQTQNFVIGEKLIQNIDTRNKNRQIDVTLCDNNKEFINQNNDVTDCLFSSTD 450
E+F+H + N + IQ I +KN+++DV L D + + N SST+
Sbjct: 680 ENFSHVAMD-VGNIDQAFEAIQQILKMSKNKRVDVVLLDRIMTELEKRNSACKSSSSSTE 738
Query: 451 SSNQRTASPNKNSSNAT 467
+ S AT
Sbjct: 739 TEASSDESTETKPCTAT 755
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 29.5 bits (63), Expect = 7.2
Identities = 38/228 (16%), Positives = 89/228 (39%), Gaps = 19/228 (8%)
Query: 275 RDSDNVTSEHQVFDAPAFQNDRIEVGLQNNFIYPQKQNEEFLSDVLRTLNEL-DNTRDDY 333
++ + +S+ + D +++E Q K+ E+ S L E D T++
Sbjct: 455 KEKEESSSQEETMDKETEAKEKVESSSQEK--NEDKETEKIESSFLEETKEKEDETKEK- 511
Query: 334 LSQSTFHESSQDRVPSQSEDPSHCAQNPNEEFISRCAKKTKCINLIDSQETIICSLPESF 393
+S+ E ++++ ++ +Q ++ + +K + + +S+E E
Sbjct: 512 -EESSSQEKTEEKETETKDNEESSSQEETKDKENEKIEKEEASSQEESKENET-ETKEKE 569
Query: 394 NHYSQSQTQNFVIGEKLIQNIDTRNKNRQIDVTLCDNNKEFINQNNDVTDCLFSSTDSSN 453
SQ +T+ EK + I+ Q + +N K ++ + T++
Sbjct: 570 ESSSQEETK-----EKENEKIEKEESAPQEETKEKENEKIEKEESASQEETKEKETETKE 624
Query: 454 QRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNGDSDSMKAQKE 501
+ +S N++ N + + E + N K D D+ ++ KE
Sbjct: 625 KEESSSNESQENVNTESEKKEQV--------EENEKKTDEDTSESSKE 664
>At1g50600.1 68414.m05683 scarecrow-like transcription factor 5
(SCL5) similar to SCARECROW GB:AAB06318 GI:1497987 from
[Arabidopsis thaliana]
Length = 597
Score = 29.5 bits (63), Expect = 7.2
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 444 CLFSSTDSSNQRTASPNKNSSNATIDFQFNEAII--GDNEKFIRSNNKNGDSDS 495
C S+ + NKN+S++T F NE+ I +N R NN + + ++
Sbjct: 108 CTLESSSGTKSHPCLNNKNNSSSTTSFSSNESPISQANNNNLSRFNNHSPEENN 161
>At2g34300.1 68415.m04196 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 770
Score = 29.1 bits (62), Expect = 9.5
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 432 KEFINQNNDVTDCLFSSTDSSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNG 491
K F ++ N+ + ++T+++ +T S N N + + G+ K NN +G
Sbjct: 74 KNFSDEKNEENE---AATENNQVKTDSENSAEGNQVNESSGEKTEAGEERKESDDNNGDG 130
Query: 492 DSDSMKAQKE 501
D + K KE
Sbjct: 131 DGEKEKNVKE 140
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.131 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,794,253
Number of Sequences: 28952
Number of extensions: 550551
Number of successful extensions: 1627
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1619
Number of HSP's gapped (non-prelim): 20
length of query: 640
length of database: 12,070,560
effective HSP length: 86
effective length of query: 554
effective length of database: 9,580,688
effective search space: 5307701152
effective search space used: 5307701152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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