Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001636-TA|BGIBMGA001636-PA|undefined
(640 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 34 0.070
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 31 0.37
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 31 0.65
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 29 1.5
SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces pom... 29 2.6
SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3 |Schizos... 29 2.6
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 29 2.6
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 28 3.5
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 3.5
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 28 3.5
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 28 3.5
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 28 3.5
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 28 4.6
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 8.0
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 27 8.0
SPBP35G2.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 8.0
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 33.9 bits (74), Expect = 0.070
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 166 IKNDGPSRIDDTLRSSNETYCESGLRETANDNKQSDHGNITDQRILDSLVITNELTSDDV 225
+ ND PS +L+ N R + N +++++ + DQ + + V ++ S+++
Sbjct: 288 LSNDSPSNTSLSLQKQNSIVANEDKR-SVNGSERTETRSSIDQSEMRTNV-SDSTKSEEL 345
Query: 226 VVINNRKCDDTTTLKC 241
IN+ K D+T++LKC
Sbjct: 346 KKINSIKVDNTSSLKC 361
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 31.5 bits (68), Expect = 0.37
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 445 LFSSTDSSNQ-RTASPNKNSSNATIDF-QFNEAIIGDNEKFIRSNNKNGDSDSMKAQKEA 502
L +S D SNQ + +SPNK+SS +I+ F++ +NE +S NK + D M +
Sbjct: 287 LKASHDPSNQTQLSSPNKSSSPTSIEISDFSK----NNENHDQSENKEEEEDMMLTRPIE 342
Query: 503 VP 504
+P
Sbjct: 343 IP 344
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 30.7 bits (66), Expect = 0.65
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 425 VTLCDNNKEFINQNNDVTDCLFSSTDSSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFI 484
+ + NN +QN S+ +SSN S +K+ + F + + DN
Sbjct: 325 INIVGNNDSIPSQNFKSGKTFVSNANSSNSNDGSSSKSLDVGSFVNAFKQLNVNDNSS-- 382
Query: 485 RSNNKNGDSDS 495
+NN +G++DS
Sbjct: 383 -NNNSSGNTDS 392
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 29.5 bits (63), Expect = 1.5
Identities = 33/182 (18%), Positives = 82/182 (45%), Gaps = 9/182 (4%)
Query: 324 NELDNTRDDYLSQSTFHESSQDRVPSQSEDPSHCAQNPNEEFISRCAKKTKCINLIDSQE 383
+E +++ +D S S+ +S + S SE + + + E S + DS+
Sbjct: 135 SESESSSEDSDSSSSSSDSESE---SSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSES 191
Query: 384 TIICSLPESFNHYSQSQTQNFVIGE---KLIQNIDTRNKNRQIDVTLCDNNKEFINQNND 440
+S + S S++++ G + ++ + + D + ++ E + + D
Sbjct: 192 ESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSED 251
Query: 441 VTDCLFSSTDSSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNGDSDSMKAQK 500
+D SS+DS ++ ++ + +SSN++ + + D+E S++++ DS S +
Sbjct: 252 -SDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSES--ESSSEDSDSTSSSSDS 308
Query: 501 EA 502
++
Sbjct: 309 DS 310
>SPCC1442.04c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 409
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 335 SQSTFHESSQDRVPSQSEDPSHCAQNPNEEFISRCAKKTKCINLIDSQETIICSLPE 391
S+ F+ ++ D + +N E+F + + +NL+DS ++C P+
Sbjct: 216 SECAFYGNNNDEGMYLYSNGDDLNENTIEDFFGLVRARLESLNLLDSDSELLCEFPD 272
>SPAC1687.22c |puf3|SPAC222.02c|RNA-binding protein Puf3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 732
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 447 SSTDSSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNGDSDSMKAQKEAVP 504
SS D++N P+ S + FN ++I N F +NK +S + +P
Sbjct: 29 SSLDTNNYGQRRPSLLSGTSPTSSFFNSSMISSNYTFPHGSNKQASLESPVSYSNPIP 86
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 28.7 bits (61), Expect = 2.6
Identities = 54/315 (17%), Positives = 114/315 (36%), Gaps = 18/315 (5%)
Query: 171 PSRIDDTLRSSNETYCESGLRETANDNKQSDHGNITDQRILDSLVITNELTSDDVVVINN 230
P+ + ++ + SG QS G + I + + ++
Sbjct: 724 PTSMQSSVSRPQSSGDASGFNTIFTSISQSSDGETSGYTISSNSSQNSASEPQTAFTSSS 783
Query: 231 RKCDDTTTLKCIDGKIRELANENSSVAAPISKXXXXXXXXXXXXRDSDNVTSEHQV---- 286
T T I + ++ NSS ++PIS S + TS +
Sbjct: 784 SSATPTITQSSISTSVSSQSSMNSSYSSPISSNSVTSSTSIISSIASSSYTSIPSISSIA 843
Query: 287 ---FDAPAFQN--DRIEVGLQNNFIYPQKQNEEFLSDVLRTLNELDNTRDDYLSQSTFHE 341
FDA F + + + G ++F +E SDVL + + + ++
Sbjct: 844 SSFFDASGFTSIYNGTKAGFSSSFAL-ASNSESGASDVLSS----TIAKPTFKFSTSNSG 898
Query: 342 SSQDRVPSQSEDPSHCAQNPNEEFISRCAKKTKCINLIDSQETIICSLPESFNHYSQSQT 401
S+ +PS S + ++ K + + + + I S S ++ +T
Sbjct: 899 STSYSIPSSSSRNEGTTSYSSNITVTSSTLKPSLTSSVSTASSYIASSASSNTLSTEPKT 958
Query: 402 --QNFVIGEKLIQNIDTRNKNRQIDVTLCDNNKE-FINQNNDVTDCLFSSTDSSNQRTAS 458
+ + E I +I+T + + + +L + + ++ + S ++S + T+S
Sbjct: 959 FSSSSTLSES-ISSINTNSLTVKPESSLSSSTTSGLTSSSSTIPSSTRSESNSESASTSS 1017
Query: 459 PNKNSSNATIDFQFN 473
+K SS++T Q N
Sbjct: 1018 ASKRSSSSTSLVQSN 1032
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 307 YPQKQNEEFLSDVLRTLNELDNTRDDYLS 335
Y KQNE S +L+++ EL+ T Y++
Sbjct: 73 YNSKQNEHVRSYILKSMRELEATNQSYIT 101
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.3 bits (60), Expect = 3.5
Identities = 24/125 (19%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 379 IDSQETIICSLPESFNHYSQSQTQNFVIGEKLIQNIDTRNKNRQIDVTLCDN-NKEFINQ 437
++ E +I L E ++ NF + + + ++++ + + V +N N+E+
Sbjct: 1246 LERNEEVITELREKIETL-KTDLANFRLNK---EQLESQLQTEKAAVKKLENSNEEYKRH 1301
Query: 438 NNDVTDCLFSSTDSSNQRTASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNGDSDSMK 497
N ++ L SST +S+ + N+ S + + N+ I + +K+ D ++ +
Sbjct: 1302 NQEILLSLNSSTSTSSDASRLKNELVSKENLIEELNQEIGHLKSELETVKSKSEDLENER 1361
Query: 498 AQKEA 502
AQ ++
Sbjct: 1362 AQNQS 1366
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 175 DDTLRSSNET-YCESGLRETANDNKQSDHGNITDQRILDSLVITNELTSDDVV 226
DD ++ + E YC +G E D K + + RI IT E+T D+V
Sbjct: 291 DDAIKIAKEVKYCNAGTAEFLLDQKGRHYFIEINPRIQVEHTITEEITGVDIV 343
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 326 LDNTRDDYLSQSTFHESSQDRVPSQSEDPSHCAQNPNEEFISRCAKKTKCINLIDSQETI 385
+D+ +S+ + + S Q PS +D S+C+ EFI A+ + + + T+
Sbjct: 244 IDSMSMSIISKVSSYGSRQTYPPSGIDDSSYCSMFVETEFIVEIAQTV--FSFVQVRGTV 301
Query: 386 ICSLPESFNHY 396
C E F+ +
Sbjct: 302 PCFWEEQFSSW 312
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 307 YPQKQNEEFLSDVLRTLN--ELDNTRDDYLSQSTFHESSQDRVPSQSEDPSH 356
Y N F S + + N E+ T +D SQ+ H SS PSQ H
Sbjct: 215 YRDDINNTFGSQTVSSANGKEVPQTSEDSSSQAPHHSSSSGHAPSQQGGNKH 266
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 27.9 bits (59), Expect = 4.6
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 451 SSNQR---TASPNKNSSNATIDFQFNEAIIGDNEKFIRSNNKNGDSDSMKAQKEAV 503
SSN+R + P K NA +D N A + ++ NNKN +S A+ AV
Sbjct: 449 SSNKRLIPSTPPTKKPINAVLDAAKNSAAKDLHLAKMKLNNKNDESSLSPAKSHAV 504
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1334
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 614 NKIVVGCMDGYSLLSYSALKCFNLLQP 640
NK+ VGC G+ ++S L+ +LL P
Sbjct: 1163 NKLCVGCTRGFEVVSLDNLETQSLLDP 1189
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1778
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/66 (24%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 190 LRETANDNKQSDHGNITDQRILDSLVITNELTSDDVVVINNRKCDDTTTLKCIDGKIREL 249
L ++ ND+ T ++ + LVIT++++ DD++ + +D + D K++E
Sbjct: 719 LFDSLNDDVLLSADAFTPRQNIKKLVITHKISKDDILQNGVKNGNDAKS----DSKVQEK 774
Query: 250 ANENSS 255
A +N +
Sbjct: 775 APQNEA 780
>SPBP35G2.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 172 SRIDDTLRSSNETYCESGLRETANDNKQSDHGNITDQRILDSLVITNELTSDDVVVIN 229
S I+D + + NE Y + ++K HG D++ LDS ++ N V IN
Sbjct: 5 SSIEDRI-NKNEAYIAKFFEIFSKNDKIRFHGVSLDRKALDSFMVRNNFKKRFVSGIN 61
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.131 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,799,046
Number of Sequences: 5004
Number of extensions: 117579
Number of successful extensions: 412
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 401
Number of HSP's gapped (non-prelim): 23
length of query: 640
length of database: 2,362,478
effective HSP length: 77
effective length of query: 563
effective length of database: 1,977,170
effective search space: 1113146710
effective search space used: 1113146710
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)
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