Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001635-TA|BGIBMGA001635-PA|IPR001023|Heat shock protein
Hsp70, IPR013126|Heat shock protein 70
         (634 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    26   1.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           25   1.4  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   1.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   2.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   2.5  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   5.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   5.8  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 5/42 (11%)

Query: 420 RTKDLTTLDDYQNSMTIEVFEGERTLTKDNSLLGVFDLHGIP 461
           R K L +L+D++N M I + +G+  +  +N    + DL G P
Sbjct: 374 RKKQLKSLEDWENEMNI-ITKGKPLIRVEN----IIDLEGAP 410


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 6/99 (6%)

Query: 222 NTRLGGEDFDNRLVAYFSEDFRKRFNIDITKNPKSLRRLKTAAERVKRFLTSATEATVQV 281
           N  L G   D+R   YFS  F KR +  +    ++   L+  A  V    +         
Sbjct: 87  NNHLYGSTPDSR--DYFSRPFEKRLHSRLPG--RNFNLLRADANSVNELESQGFNYDPGR 142

Query: 282 ESLYDDIDYVGKISRTVFEELCSDLFYDTLKLIEQALAD 320
             + DD  YVG     V+     D  YD+++  + A+ D
Sbjct: 143 GHIEDD--YVGPAMELVYAWSTIDYTYDSIEARDSAIFD 179


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 11/35 (31%), Positives = 20/35 (57%)

Query: 382  VNIRDLHLVDVVPLSLGVETVRGVMYKVIERNTSI 416
            +NI+ LH + V+P   G++T    +Y  +   T+I
Sbjct: 1248 LNIKTLHGLKVIPTPAGLKTTGAAVYARVIAPTTI 1282


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 554 LGEEERMQIKKECESPVEWLDDNGDCLREEF 584
           + E +R+ + + CE   + L ++ +CLRE F
Sbjct: 401 ISEVQRVVLGRLCEKVAKQLVNSVNCLRESF 431


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)

Query: 554 LGEEERMQIKKECESPVEWLDDNGDCLREEF 584
           + E +R+ + + CE   + L ++ +CLRE F
Sbjct: 439 ISEVQRVVLGRLCEKVAKQLVNSVNCLRESF 469


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 469 KVDVTFDIDANGILSVTARDRSTGNCKSITIKNENRVSQLQI 510
           KV    DI  N     T    +TGN   +T  N +  SQLQI
Sbjct: 698 KVKKDKDIILNVPKESTQSLTTTGNVSYLTTNNTSNNSQLQI 739


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)

Query: 221 GNTRLGGEDFDNRLVAYFSEDFRKRFNIDITKNPKSLR 258
           GN+R    +FD   V Y  ++F  R  ++   +P ++R
Sbjct: 131 GNSRANTYNFDYPQVPYTVKNFHPRCAVNNYNDPSNVR 168


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,294
Number of Sequences: 429
Number of extensions: 7363
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 7
length of query: 634
length of database: 140,377
effective HSP length: 62
effective length of query: 572
effective length of database: 113,779
effective search space: 65081588
effective search space used: 65081588
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)