GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001635-TA|BGIBMGA001635-PA|IPR001023|Heat shock protein
Hsp70, IPR013126|Heat shock protein 70
         (634 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   224   1e-60
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   223   3e-60
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   193   4e-51
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   4.8  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   8.5  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  224 bits (548), Expect = 1e-60
 Identities = 103/195 (52%), Positives = 151/195 (77%), Gaps = 3/195 (1%)

Query: 171 NEPTAAALAYSIDKKL-KGKKILVYDLGGGTFDVSILIIKDGPVYEVKATAGNTRLGGED 229
           NEPTAAA+AY +DKK  K + +L++DLGGGTFDVS+L I++G ++EVKATAG+T LGGED
Sbjct: 2   NEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGED 60

Query: 230 FDNRLVAYFSEDFRKRFNIDITKNPKSLRRLKTAAERVKRFLTSATEATVQVESLYDDID 289
           FDNRLV Y ++DF+K+   DI+ NP++LRRL+T  ER KR L+SAT+A+++++SL+D ID
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGID 120

Query: 290 YVGKISRTVFEELCSDLFYDTLKLIEQALADARLKKNDINRVILVGGSTRIPKIQEILHE 349
           Y   I+R  FE++  D F   +  +++ L DA++ K+ ++ ++LVGGSTRIPK+Q+++ E
Sbjct: 121 YSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITE 180

Query: 350 YFEGRVSA-CLNPDE 363
           YF G+     +NPDE
Sbjct: 181 YFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  223 bits (545), Expect = 3e-60
 Identities = 102/195 (52%), Positives = 152/195 (77%), Gaps = 3/195 (1%)

Query: 171 NEPTAAALAYSIDKKLKGKK-ILVYDLGGGTFDVSILIIKDGPVYEVKATAGNTRLGGED 229
           NEPTAAA+AY +DKK + ++ +L++DLGGGTFDVS+L I++G ++EVKATAG+T LGGED
Sbjct: 2   NEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGED 60

Query: 230 FDNRLVAYFSEDFRKRFNIDITKNPKSLRRLKTAAERVKRFLTSATEATVQVESLYDDID 289
           FDNRLV Y ++DF+K+   DI+ NP++LRRL+T  ER KR L+SAT+A+++++SL+D ID
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAKRTLSSATQASIEIDSLFDGID 120

Query: 290 YVGKISRTVFEELCSDLFYDTLKLIEQALADARLKKNDINRVILVGGSTRIPKIQEILHE 349
           Y   I+R  FE++  D F   +  +++ L DA++ K+ ++ ++LVGGSTRIPK+Q+++ E
Sbjct: 121 YSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITE 180

Query: 350 YFEGRVSA-CLNPDE 363
           YF G+     +NPDE
Sbjct: 181 YFNGKEPCRSINPDE 195


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  193 bits (470), Expect = 4e-51
 Identities = 94/194 (48%), Positives = 141/194 (72%), Gaps = 2/194 (1%)

Query: 171 NEPTAAALAYSIDKKLKGKKILVYDLGGGTFDVSILIIKDGPVYEVKATAGNTRLGGEDF 230
           NEPTAAA+AY +DKK   + ILVYDLGGGTFDVSIL I +G V+EV AT+G+T LGGEDF
Sbjct: 2   NEPTAAAIAYGLDKKGAEQNILVYDLGGGTFDVSILTIDNG-VFEVVATSGDTHLGGEDF 60

Query: 231 DNRLVAYFSEDFRKRFNIDITKNPKSLRRLKTAAERVKRFLTSATEATVQVESLYDDIDY 290
           D +++ YF +  +++   DI  + K+L++L+   E+ KR L+S  + T+ +E+L  D D+
Sbjct: 61  DQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDF 120

Query: 291 VGKISRTVFEELCSDLFYDTLKLIEQALADARLKKNDINRVILVGGSTRIPKIQEILHEY 350
              ++R  FEEL +D F  TLK +++ L DA + K+ I+ ++LVGGSTRIPKIQ+++ ++
Sbjct: 121 SETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIPKIQQLIKDF 180

Query: 351 FEGR-VSACLNPDE 363
           F+G+ ++  +NPDE
Sbjct: 181 FDGKELNRGINPDE 194


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 457 LHGIPPAPRGVAKVDVTFDIDAN 479
           +HGI P+P   +K +V+  ID N
Sbjct: 168 IHGIQPSPTLPSKEEVSKKIDDN 190


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 454 VFDLHGIPPAPRGVAKVDVTFDIDANGILSVT 485
           V+   G+  A   V  +D   D+D NG  + T
Sbjct: 55  VYSFIGVNDADWSVLVIDPELDVDQNGFRNFT 86


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.135    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,796
Number of Sequences: 317
Number of extensions: 5662
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 5
length of query: 634
length of database: 114,650
effective HSP length: 61
effective length of query: 573
effective length of database: 95,313
effective search space: 54614349
effective search space used: 54614349
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)