Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001634-TA|BGIBMGA001634-PA|undefined
(445 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces po... 34 0.046
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 33 0.061
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 31 0.25
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 31 0.32
SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces p... 29 0.99
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 29 1.3
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 28 2.3
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.3
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 28 3.0
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 3.0
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 28 3.0
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 28 3.0
SPAC1F12.02c |p23fy||translationally controlled tumor protein ho... 27 4.0
SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces pombe... 27 4.0
SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr... 27 5.3
SPCPB16A4.03c |ade10||IMP cyclohydrolase|Schizosaccharomyces pom... 27 5.3
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 5.3
SPBC651.12c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 5.3
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 27 5.3
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 27 5.3
SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces pombe... 27 5.3
SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor Atf1|Sch... 27 7.0
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 27 7.0
SPAC140.03 |arb1||argonaute binding protein 1|Schizosaccharomyce... 27 7.0
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 26 9.2
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 9.2
SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein Mc... 26 9.2
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 26 9.2
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 26 9.2
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 9.2
>SPBC1861.04c |||RNA-binding protein Prp24|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1014
Score = 33.9 bits (74), Expect = 0.046
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 271 RVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTEALDAALKNGTGGRMFFKARHYRL 330
R+ KR LD EE K + EP + T AL K G G +F K++
Sbjct: 527 RISFKRQLDSFAEET---KQTVENTEPLKVPQADDTAALSKKRKPGQEGDVFKKSKPIEQ 583
Query: 331 RQQKQKEKSGSRFAPKTVRLTKLNKEFYEDRKWPSGVVRYVIKDNAQYDVPGLRRRLEEV 390
+ +++ P + +L K F++D ++R I ++ Q DV + E
Sbjct: 584 HRNREELTVLVTNLPSDISENEL-KIFFKDC---GNIIRIFILEDNQKDVKVAQIEFSET 639
Query: 391 NEILMEKT 398
+E+L KT
Sbjct: 640 SEVLAAKT 647
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 33.5 bits (73), Expect = 0.061
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 249 KNTTDAKGSDSISDVNVEA-KKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTE 307
K+ + GS+++ D ++E+ +KD+ +KK+S + D RK+ K E+ L+S +E
Sbjct: 155 KSKSKDDGSEALDDGDIESSEKDKKKKKKSKENDDAPKKDRKTRKKEEKARKLASMLESE 214
Query: 308 ALD 310
D
Sbjct: 215 NKD 217
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 248 DKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTE 307
+ N ++A I +V V+ KK++ R+K+ + + + + +KGS L+S+ V+
Sbjct: 160 NNNESEAAAPPEIPEVRVKTKKEKEREKKERE-KLRKKQQQAKKKGSTGEDTLASSEVSS 218
Query: 308 ALD 310
+D
Sbjct: 219 EVD 221
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 31.1 bits (67), Expect = 0.32
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 78 RINPDITPFPKNLNISENDEINSTIIDDDLKSTLDKLEITDEMEILIEEI 127
RI PD FPK EN+ +N I+ + D + I E E IEEI
Sbjct: 399 RIIPDF--FPKIFGPKENESMNKDIVIEKFSELRDIINIDIEKEKTIEEI 446
>SPCC1620.12c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 595
Score = 29.5 bits (63), Expect = 0.99
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 57 LCQSYPGVARRKRDVR--ISESLRINPDITPFPKNLNISENDEINSTIIDDDLKSTLDKL 114
L Q Y R D+ + +SL +N D T FP L+ E ++T ++L+
Sbjct: 407 LVQKYTFYTRTPVDLNAWVEDSLALNIDTTQFPSYLSYHETSVSHNTYRQNNLE------ 460
Query: 115 EITDEMEILIEEIHTVIDMAVSRAKTRHCNGTTKHNSVPKINVTNTDLSGAVEIITN 171
E+ ++ + L +I + + V K T ++ VT +++ A EI+ N
Sbjct: 461 ELKNQNDYLTSQITNLEEGMVMLNK----ENTKLSEALSNHRVTRSEMEEATEILKN 513
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 251 TTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNH 304
T D++G+ D N++ K +R+KRS+D D E +V++++ S + + H
Sbjct: 71 TQDSEGNKV--DKNLKENKS-IRRKRSIDNDYELSNVKRNDITSGKNREFENEH 121
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 28.3 bits (60), Expect = 2.3
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 355 KEFYEDRKWPSGVVRYVIKDNAQY-DVPGLRRRLEEVNEILMEKTCVRIRELSEDEVGKY 413
KEF E +K G + +K N D G R + L+E V +R+L + GK
Sbjct: 640 KEFMEYKKKGDGPGYWKLKSNEVVPDEAGTRSMVSPETVCLLESMQVGVRQLEDAGYGKT 699
Query: 414 KDYLVIDDSPDYVTGRVGGRQVPTQTII 441
D + D+ + ++ + T+ I
Sbjct: 700 MDEINDDEDEEQPAEQLLAPWITTRNFI 727
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 28.3 bits (60), Expect = 2.3
Identities = 33/171 (19%), Positives = 74/171 (43%), Gaps = 17/171 (9%)
Query: 105 DDLKSTLDKLEITDEMEILIEEIHTVIDMAVSRAKTRHCNGTTKHNSVPKINVTNTDLSG 164
+ LK+T K I E + L+ +++ ++S +V +++ ++D +
Sbjct: 392 EKLKNTASKQAI--ESQSLMNSGPELLEPSISDPMLEKMKTDAGKQTVESLSLKSSDATI 449
Query: 165 AVEIITNLVISNVENALTRKDFCTSKDIPIARCGYGSDDRCRQTYRSTKSGAVKYSTQHR 224
+++L + ++N + K S+ + I S K+GA+K + +H+
Sbjct: 450 PKPSVSDLGVEKLKNDAS-KCAVESQSLMINDPSVSSTSFYNPNMEKLKNGAIKQAIEHQ 508
Query: 225 ------------PTYYQSTNHYPLSRIKHLLRSQGDKNTTDAKGSDSISDV 263
P ++QS++ P+S K SQ + + +K S +IS++
Sbjct: 509 ALNAAILNKTQLPYFHQSSSELPISASKRAALSQ--QTESASKSSSNISEM 557
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 27.9 bits (59), Expect = 3.0
Identities = 16/62 (25%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 235 PLSRIKHLLRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGS 294
PLSR + ++ S D ++ ++ SD++S+ K R ++ L +ED+V+ + + +
Sbjct: 822 PLSRSQSVITSSTDVTSSASRSSDTVSNYPKATIKGTGRIRKRL---TDEDNVKATGQAA 878
Query: 295 EE 296
E+
Sbjct: 879 EK 880
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.9 bits (59), Expect = 3.0
Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 11/140 (7%)
Query: 226 TYYQSTNHYPLSRIKHLLRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEE- 284
T+ + H ++ + +R D+N D G+D + ++ K SL+ V E
Sbjct: 783 TFDKQVTHCSVNHLVQQIRKLKDENKKDQSGTDKLMKKIYHCEQSLKEKTNSLETLVSEK 842
Query: 285 -------DSVRKSEKGSE-EPGNLSSNHVTEAL--DAALKNGTGGRMFFKARHYRLRQQK 334
D+ R+S+K + E NLSS L ++ + R + R ++
Sbjct: 843 KELKNLLDAERRSKKAIQLELENLSSQAFRRNLSGSSSPSERSQSRELKLLQASEKRLKE 902
Query: 335 QKEKSGSRFAPKTVRLTKLN 354
Q E+ S R T+LN
Sbjct: 903 QVEERNSLIKNIVTRFTQLN 922
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 27.9 bits (59), Expect = 3.0
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 239 IKHLLRSQGDKNT-TDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEP 297
+ LL SQ +T +++ S S S +V D S GD D+ R+S +
Sbjct: 249 LNSLLTSQSKNSTPSESDSSSSESSSSVSDSSDLSSTSDSSSGDESSDTARQSSSDTISS 308
Query: 298 GNLS-SNHVTEALDAALKNGT 317
N+S S + A + + GT
Sbjct: 309 NNVSVSVSLNTANEFSFPQGT 329
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.9 bits (59), Expect = 3.0
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Query: 246 QGDKNTTD----AKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLS 301
+ +K TD KG+ +SD E + K + ++EE S EK S++ N +
Sbjct: 375 EAEKTETDEPAVGKGASDVSD-TAEISEKTEAKNADSEANLEEKSDVGEEKESKDENNKA 433
Query: 302 SNHV-TEALDAALKNGTGGR 320
S H E D + N G+
Sbjct: 434 SLHKDVEEKDTKITNEDTGK 453
>SPAC1F12.02c |p23fy||translationally controlled tumor protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 168
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 247 GDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDV-----EEDSVRKSEKGSEEPGNL 300
GD+ +DA + D+ EA V K+ D D+ ED+ +E+G+E NL
Sbjct: 10 GDELVSDAYDLKEVDDIVYEADCQMVTVKQGGDVDIGANPSAEDAEENAEEGTETVNNL 68
>SPCC622.17 |apn1||AP endonuclease Apn1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 342
Score = 27.5 bits (58), Expect = 4.0
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 266 EAKKDRVRKKRSLDGDVEEDSVRKSEK-GSEEPGNL 300
EAKKDR KK+S DGD +RK +K G+ E +L
Sbjct: 307 EAKKDR--KKKSKDGDQTTLLLRKKQKLGNAEVKSL 340
>SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1225
Score = 27.1 bits (57), Expect = 5.3
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 79 INPDITPFPKNLNISENDEINSTIIDDDLKS 109
++PD+TP PK + D++N ++ + K+
Sbjct: 842 LSPDVTPAPKASSTVATDKVNIEVLPESQKT 872
>SPCPB16A4.03c |ade10||IMP cyclohydrolase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 585
Score = 27.1 bits (57), Expect = 5.3
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 399 CVRIRELSEDEVGKYKDYLVIDDSPDYVTGRVGGRQV 435
C R D + + D++ + D+ D T R+ R+V
Sbjct: 293 CAYARARGADRMSSFGDFIALSDTVDVCTARIISREV 329
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 27.1 bits (57), Expect = 5.3
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 7/114 (6%)
Query: 194 IARCGYGSDDRCRQTYRSTKSGAVKYSTQHRPTYYQSTNHYPLSRIKHLLRSQGDKNTTD 253
+A G GS+ + RS+K+ +V Y HR T + LS + L + N
Sbjct: 265 VAETGSGSNFSRATSSRSSKTRSVVYEPNHRHTSFFGDT---LSNLSSSLNDKKSPNDDH 321
Query: 254 AKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTE 307
A + + + + V + +V+ED V + + E N S E
Sbjct: 322 AVLDSELMEQTLPDSAEAV----EIANNVKEDIVSTANDDANELDNTSEKATLE 371
>SPBC651.12c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 27.1 bits (57), Expect = 5.3
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 15/152 (9%)
Query: 214 SGAVKYSTQHRPTYYQSTNHYPLSRIKHLLRSQGDKNTTDAKGSDSISDVNVEA----KK 269
S VKY+ + + ++T+ S+ ++ +K A ++I DV ++
Sbjct: 3 SKKVKYNPRKSASQNEATSASAGSKAFGFNSAKKEKLHRMALSMEAIEDVEDQSFNGKSS 62
Query: 270 DRVRKKRSLDGDVEEDS---------VRKSEKGSEEPGNLSSNHVTEALDAALKNGTGGR 320
+ VRK+R LD D++E S R + S++P SS + E + K G+
Sbjct: 63 NLVRKRRGLDEDIDEFSSSSEDERKPARHPQSSSQKP-FASSTYNVELPTSPTKITNIGQ 121
Query: 321 MFFKARHYRLRQQKQKEKSGSRFAPKTVRLTK 352
+A Y L + Q+ K+ +P + L K
Sbjct: 122 SSPRALRY-LSPESQRIKNAKMKSPISTHLAK 152
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 27.1 bits (57), Expect = 5.3
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 261 SDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTEALDAALKNGT 317
S ++E ++++V KKR+ E S S S +H+ L LK T
Sbjct: 579 SQKDIERRREKVAKKRNSSASKLEMSDSSKHHLSRSSSRFSKSHIISQLHNHLKKST 635
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 27.1 bits (57), Expect = 5.3
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 349 RLTKLNKEFYE-DRKWPSGVVRYVIKDNAQYDVPGLRRRLEEVNEILMEKTCVRIRELSE 407
R KL+KE+ +KW G K ++ LR+RL+++ M K+ ++ + +
Sbjct: 156 RTLKLSKEWKNPSKKWKVGC-----KLAYEFFPKDLRKRLQKLETEDMNKSNRKLLQDAT 210
Query: 408 DEVGKYKD 415
DE K+KD
Sbjct: 211 DEYAKFKD 218
>SPAC7D4.03c |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 27.1 bits (57), Expect = 5.3
Identities = 20/99 (20%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 92 ISENDEINST--IIDDDLKSTLDKLEITDEM----EILIEEIHTVIDMAVSRAKTRHCNG 145
I E+D +++T ++ DDL S + ITD+ L+ T+++ + + + +
Sbjct: 43 IQEHDPVDTTNVLVADDLDSNFEPFSITDDYGKYENTLVSHSSTILNEPYNESPSSSSSD 102
Query: 146 TTKHNSVPKINVTNTDLS-GAVEIITNLVISNVENALTR 183
++ ++ P +++ L A EI + +I+ + R
Sbjct: 103 SSSRSTSPFSQLSSQSLRLNAEEIAPSSLINKAVQSTLR 141
>SPBC29B5.01 |atf1|mts1, sss1, gad7|transcription factor
Atf1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 26.6 bits (56), Expect = 7.0
Identities = 44/198 (22%), Positives = 76/198 (38%), Gaps = 25/198 (12%)
Query: 93 SENDEINSTIIDDDLKSTL-----DKLEITDEMEILIEEIHTVIDMAVSRAKTR--HCNG 145
SEND+ ST ++ LK T D + + + + ++ SR + + + G
Sbjct: 297 SENDQAASTTANNLLKQTQQQTFPDSIRPSFTQNTNPQAVTGTMNPQASRTQQQPMYFMG 356
Query: 146 TTKHNSVPKI---NVTNTDLSGAVEIITNLVISNVENALTRKDFCTSK-DIPIARCGYGS 201
+ + N +P + V D S + T+ N EN T TS D+P A
Sbjct: 357 SQQFNGMPSVYGDTVNPADPSLTLRQTTDFSGQNAENGSTNLPQKTSNSDMPTAN----- 411
Query: 202 DDRCRQTYRSTKSGAVKYSTQHRPTYYQSTNHYPLSRIKHLLRSQGDKNTTDAKGS---D 258
+ YST P+ + P S I S+ T+ +KGS +
Sbjct: 412 ------SMPVKLENGTDYSTSQEPSSNANNQSSPTSSINGKASSESANGTSYSKGSSRRN 465
Query: 259 SISDVNVEAKKDRVRKKR 276
S ++ + E +K + + R
Sbjct: 466 SKNETDEEKRKSFLERNR 483
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 26.6 bits (56), Expect = 7.0
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 12/106 (11%)
Query: 245 SQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNH 304
S+ + + D S+ + AKK +V+KKR+ D + E++ +K + + +
Sbjct: 156 SEEESESEDNSASEEDELDSAPAKKAQVKKKRTKD-ESEQEEAASPKKNNTKKQKVEGTP 214
Query: 305 VTE---ALDAALKNGTGGRMFFKARHYRLRQQKQKEKSGSRFAPKT 347
V E A L+ G G +++KQ+ S + +PKT
Sbjct: 215 VKEKKVAFAEKLEQGPTGP--------AAKKEKQQASSNAPSSPKT 252
>SPAC140.03 |arb1||argonaute binding protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 399
Score = 26.6 bits (56), Expect = 7.0
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 317 TGGRMFFKARHYRLRQQKQKEKSGSRFAPKTVRLTKLNKEFYEDRKWPSGVVRYVIKDNA 376
+G +F+ ++ + E SR P TVR+ + + + RKW S R I+
Sbjct: 41 SGWEPYFQEPELTAEEKLENETLYSRNIPLTVRMERFIQRYRSRRKW-SDPTR--IRLFT 97
Query: 377 QY-DVPGLRRRLEEVNEILMEKTCVRIRELSEDEVGKYKDYLVIDD 421
Y D+ G+ ++ + RE+S Y +Y ++D+
Sbjct: 98 MYLDLGGVSTGQKQFTGGTDINNDAKAREVSAQTTTDYIEYDILDE 143
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 243 LRSQGDKNTTDAKGSDSISDVNVEAKKDRVR 273
L S D++ T+ + ++SD+N++ K R+R
Sbjct: 244 LLSDSDQSMTNISSNSTVSDLNLKTLKKRLR 274
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 9.2
Identities = 15/77 (19%), Positives = 34/77 (44%)
Query: 237 SRIKHLLRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEE 296
S+ K S+ + ++ ++ S S+ + + S + EE+ + K+E+ E
Sbjct: 77 SKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKES 136
Query: 297 PGNLSSNHVTEALDAAL 313
SS+ +E + A+
Sbjct: 137 SSESSSSSESEEEEEAV 153
>SPAC13A11.03 |mcp7|mug32|meiosis specific coiled-coil protein
Mcp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 26.2 bits (55), Expect = 9.2
Identities = 15/64 (23%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 252 TDAKGSDSISDVNVEAKKDRVRKK-RSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTEALD 310
+DAK S +++A+ D +++K ++LD ++ + ++ +G+E N + + A +
Sbjct: 74 SDAKRSRESVLGSLQAQLDDLKQKSKTLDENISFEKSKRDNEGTENDANQYTLELLHAKE 133
Query: 311 AALK 314
+ LK
Sbjct: 134 SELK 137
>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 497
Score = 26.2 bits (55), Expect = 9.2
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 266 EAKKDRVRKKRSLDGDVEEDSVRKSEK 292
E KK++ +KKRS D EE V+KS+K
Sbjct: 468 EKKKEKSKKKRSADDASEE--VKKSKK 492
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 26.2 bits (55), Expect = 9.2
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 276 RSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTEALDAALKNGTGGRMFFKARHYRLRQQKQ 335
+ L G+ E V +S G++E N++ E + K+G G K +R
Sbjct: 13 KDLYGEENEKKV-ESASGNQETSNVTPTKENEGYEELEKSGEAGAERTKENPFREEPGAD 71
Query: 336 KEKSGS 341
++SGS
Sbjct: 72 FDRSGS 77
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 26.2 bits (55), Expect = 9.2
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 5/37 (13%)
Query: 93 SENDEINSTIIDDDLKSTLDKLEITDEMEILIEEIHT 129
S++D IN+TI +DLKS ++ ITDE +E++H+
Sbjct: 275 SQSDIINTTI--NDLKS---QMTITDESSEDLEKLHS 306
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,114,006
Number of Sequences: 5004
Number of extensions: 93252
Number of successful extensions: 255
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 243
Number of HSP's gapped (non-prelim): 34
length of query: 445
length of database: 2,362,478
effective HSP length: 75
effective length of query: 370
effective length of database: 1,987,178
effective search space: 735255860
effective search space used: 735255860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 55 (26.2 bits)
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