GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001634-TA|BGIBMGA001634-PA|undefined
         (445 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    27   0.24 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               25   0.97 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   3.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.9  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 27.5 bits (58), Expect = 0.24
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 75  ESLRINPDITPFPKNLNISENDEINSTIIDD 105
           ES  I+ D  P  KNLN+S +  +N T+  D
Sbjct: 237 ESANISLDEPPLGKNLNLSLHASLNHTLTKD 267


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 25.4 bits (53), Expect = 0.97
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 7/148 (4%)

Query: 253 DAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTEALDAA 312
           D   S  I+D ++E + +  R +R L    +   +   +   EE   LS+    +  D  
Sbjct: 4   DEVESFEITDYDLENEFNINRPRRKLSKKQQMLGIWADDSDEEE---LSARPSFKTFDKG 60

Query: 313 LKNGTGGRMFFKARHYRLRQQKQK--EKSGSRFAPKTVRLTKL--NKEFYEDRKWPSGVV 368
            KN T    F      +  + K++  +K       + ++  K   N    +D +  S   
Sbjct: 61  PKNYTTPVNFVAGGIQQAGKPKEETDDKDDDESDNENIKSQKEFPNSSSSDDERPNSIHQ 120

Query: 369 RYVIKDNAQYDVPGLRRRLEEVNEILME 396
           R     N   D+ GLR++  +VN +LM+
Sbjct: 121 RASFSLNTDGDIAGLRKKKHKVNPLLMQ 148



 Score = 23.8 bits (49), Expect = 3.0
 Identities = 10/46 (21%), Positives = 26/46 (56%)

Query: 385 RRLEEVNEILMEKTCVRIRELSEDEVGKYKDYLVIDDSPDYVTGRV 430
           R ++E N++ +++T    ++L +    +YK Y + + +  +V  +V
Sbjct: 381 RLMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELASSFVGPKV 426


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 271 RVRKKRSLDGDVEEDSVRKSEKGSEEPG 298
           R+RK+R  DG+  +D     E   EE G
Sbjct: 265 RLRKRRQNDGEGADDRDDDEENEEEEDG 292


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 2   HFGARENSKNGHRTIL 17
           H   R N+KNG +T+L
Sbjct: 223 HINTRHNTKNGMKTLL 238


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.314    0.132    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,186
Number of Sequences: 429
Number of extensions: 5834
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 5
length of query: 445
length of database: 140,377
effective HSP length: 60
effective length of query: 385
effective length of database: 114,637
effective search space: 44135245
effective search space used: 44135245
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 45 (22.2 bits)