Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001634-TA|BGIBMGA001634-PA|undefined
(445 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g26190.1 68417.m03770 expressed protein 40 0.003
At5g61770.1 68418.m07750 brix domain-containing protein contains... 37 0.024
At5g61770.3 68418.m07752 brix domain-containing protein contains... 35 0.13
At5g61770.2 68418.m07751 brix domain-containing protein contains... 35 0.13
At5g37415.1 68418.m04501 MADS-box family protein contains Pfam p... 34 0.17
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 33 0.29
At2g25720.1 68415.m03083 expressed protein 33 0.51
At1g03910.1 68414.m00376 expressed protein low similarity to cac... 33 0.51
At5g53440.1 68418.m06641 expressed protein 32 0.67
At5g41020.1 68418.m04986 myb family transcription factor contain... 31 1.2
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 31 2.0
At1g32800.1 68414.m04043 PHD finger protein-related contains low... 31 2.0
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 30 2.7
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 30 2.7
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 30 3.6
At3g58650.1 68416.m06537 expressed protein 30 3.6
At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative simila... 30 3.6
At5g17930.1 68418.m02102 MA3 domain-containing protein low simil... 29 4.7
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 29 4.7
At4g11780.1 68417.m01877 hypothetical protein 29 4.7
At3g27730.1 68416.m03462 ATP-dependent DNA helicase, putative si... 29 4.7
At3g26210.1 68416.m03270 cytochrome P450 71B23, putative (CYP71B... 29 4.7
At2g29040.1 68415.m03530 exostosin family protein contains Pfam ... 29 4.7
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 29 4.7
At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contai... 29 4.7
At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related simil... 29 4.7
At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase I... 29 6.2
At5g02390.1 68418.m00162 expressed protein ; expression supporte... 29 6.2
At4g26950.1 68417.m03878 expressed protein contains Pfam profile... 29 6.2
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 29 6.2
At5g39750.1 68418.m04815 MADS-box family protein contains Pfam p... 29 8.2
At5g04610.1 68418.m00462 spermidine synthase-related / putrescin... 29 8.2
At4g02720.1 68417.m00368 expressed protein temporary automated f... 29 8.2
At3g60470.1 68416.m06763 hypothetical protein contains Pfam prof... 29 8.2
At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-lik... 29 8.2
At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-lik... 29 8.2
At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-lik... 29 8.2
At1g76820.1 68414.m08939 expressed protein 29 8.2
>At4g26190.1 68417.m03770 expressed protein
Length = 1067
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 253 DAKGSDSISDVNVEAKKDRVRKKRSLD---GDVEEDSVRKSEKGSEEPGN 299
DAKG++ +S V V KK + +KK LD ++EEDS++K+EK E N
Sbjct: 704 DAKGAEGVSTVEVTTKKSK-KKKNLLDHKTDNMEEDSIKKNEKKEEVDQN 752
>At5g61770.1 68418.m07750 brix domain-containing protein contains
Pfam domain, PF04427: Brix domain
Length = 345
Score = 37.1 bits (82), Expect = 0.024
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 256 GSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPG 298
G S+ +V+ KK++++KK+ D + EEDS + E+GSEE G
Sbjct: 296 GGIIFSEYDVDGKKEKLKKKQ--DEEEEEDSEEEGEEGSEEDG 336
>At5g61770.3 68418.m07752 brix domain-containing protein contains
Pfam domain, PF04427: Brix domain
Length = 346
Score = 34.7 bits (76), Expect = 0.13
Identities = 16/35 (45%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Query: 264 NVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPG 298
+V+ KK++++KK+ D + EEDS + E+GSEE G
Sbjct: 305 DVDGKKEKLKKKQ--DEEEEEDSEEEGEEGSEEDG 337
>At5g61770.2 68418.m07751 brix domain-containing protein contains
Pfam domain, PF04427: Brix domain
Length = 346
Score = 34.7 bits (76), Expect = 0.13
Identities = 16/35 (45%), Positives = 26/35 (74%), Gaps = 2/35 (5%)
Query: 264 NVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPG 298
+V+ KK++++KK+ D + EEDS + E+GSEE G
Sbjct: 305 DVDGKKEKLKKKQ--DEEEEEDSEEEGEEGSEEDG 337
>At5g37415.1 68418.m04501 MADS-box family protein contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain); MADS-box protein
AGL105
Length = 242
Score = 34.3 bits (75), Expect = 0.17
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 12/142 (8%)
Query: 34 DLRKIEVVYGPEC-LK---RDRQAKIDLCQSYPGV---ARRKRDVRISESLRINPDITPF 86
D+ + YGP+ LK ++R+ D+ Y + RRK+ V + + L D T
Sbjct: 18 DIEACVIYYGPDGELKTWPKEREKVEDIALRYSQLNEALRRKKSVTLYDFLNKKKDKTNL 77
Query: 87 PKNLNISENDEINSTIID-DDLKSTLDKLEITDEMEILIEEIHTVIDMAVSRAK----TR 141
K I++ND++ + + + + LKS + D++ LI+ + + R + +
Sbjct: 78 EKKAMITDNDDLKTCLKNVNVLKSPIADHYFNDQISQLIQSLEPHVSKVQERIRFVESQK 137
Query: 142 HCNGTTKHNSVPKINVTNTDLS 163
H H S+ I N L+
Sbjct: 138 HKETKLDHQSLASIYSLNQSLN 159
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 33.5 bits (73), Expect = 0.29
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Query: 237 SRIKHLLRSQGDKNTTDAKGSDSISDVNVEAKKD---RVRKKRSLDGDVEEDSVRKSEKG 293
S+ + L +++GD N+ +K SD S+ K D + + DGD S +KS+
Sbjct: 1108 SKSQSLKKNEGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGD 1167
Query: 294 SEEPGNLSSNHVTEALDAALKNGTGGRMFFKARHYRLRQQKQKEKSG 340
S + S+ + + + +G K + QK+ G
Sbjct: 1168 SNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSCSKSQKKSDG 1214
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 237 SRIKHLLRSQGDKNTTDAKGSDSISDVNVEAKKDR---VRKKRSLDGDVEEDSVRKSEKG 293
S K +S GD N+ +K SD S+ K D + ++ DGD S +K +
Sbjct: 1168 SNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSCSKSQKKSDGDTNSKSQKKGDGD 1227
Query: 294 S 294
S
Sbjct: 1228 S 1228
>At2g25720.1 68415.m03083 expressed protein
Length = 117
Score = 32.7 bits (71), Expect = 0.51
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 255 KGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTEALDAALK 314
KG D + ++E KK + +KK D ED + + GS P + + ++DAA K
Sbjct: 16 KGGDLATRKSIEKKKKKKQKKNKEKLDGVEDGAKTAPDGSPPPAAAAGDEDIYSIDAAKK 75
>At1g03910.1 68414.m00376 expressed protein low similarity to cactin
[Drosophila melanogaster] GI:7673675; expression
supported by MPSS
Length = 672
Score = 32.7 bits (71), Expect = 0.51
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 245 SQGDKNTTDAKGSDSISDVNVEAKKD-----RVRKKRSLDGDVEEDSVRKSEKGSEEPGN 299
S+ + T+D+ GSD +S +K R R++ S D + D RKS+K S +
Sbjct: 26 SESESYTSDSDGSDDLSPPRSSRRKKGSSSRRTRRRSSSDDSSDSDGGRKSKKRSSSK-D 84
Query: 300 LSSNHVTE 307
S VTE
Sbjct: 85 YSEEKVTE 92
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 32.3 bits (70), Expect = 0.67
Identities = 29/128 (22%), Positives = 45/128 (35%), Gaps = 8/128 (6%)
Query: 220 STQHRPTYYQSTN-----HYPLSRIKHLLRSQGDKNTTDAKGSDSI---SDVNVEAKKDR 271
S R YY S N Y S K G+ + G D S + ++
Sbjct: 49 SGDKRKEYYDSVNGEYYEEYTSSSSKRRKGKSGESGSDRWNGKDDDKGESSKKTKVSSEK 108
Query: 272 VRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTEALDAALKNGTGGRMFFKARHYRLR 331
RK+ DG+ + S KS+ E S V + D K G + + H++ +
Sbjct: 109 SRKRDEGDGEETKKSSGKSDGKHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHHKSK 168
Query: 332 QQKQKEKS 339
K +S
Sbjct: 169 AGSDKTES 176
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 31.5 bits (68), Expect = 1.2
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 237 SRIKHLLRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEE 296
S++ + + ++ TD ++I E K+ +KK S+D DVE+ ++ + G ++
Sbjct: 157 SKVSDKKKGKRKRDDTDLGAEENIDK---EVKRKNNKKKPSVDSDVEDINLDSTNDGKKK 213
Query: 297 PGNLSSNHVTEALDAALKNGTGGRMFFKARHYRLRQQKQKEKS 339
+ +E + NG K R + +++KQ E S
Sbjct: 214 RKKKKQSEDSETEE----NGLNSTKDAKKRRKKKKKKKQSEVS 252
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 249 KNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEE---DSVRKSEKGSEEPGNLSSNHV 305
K + D+ D D + KK R +KK+S D + EE +S + ++K ++ + V
Sbjct: 192 KPSVDSDVEDINLDSTNDGKKKRKKKKQSEDSETEENGLNSTKDAKKRRKKKKKKKQSEV 251
Query: 306 TEALDAALKN 315
+EA + + K+
Sbjct: 252 SEAEEKSDKS 261
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 30.7 bits (66), Expect = 2.0
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 240 KHLLRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGN 299
KH+ R D T DA + S + ++K+DR RKK S EE+ V + S++ +
Sbjct: 269 KHI-RLDTDDETFDAYHNKSAEEE--QSKEDRKRKKSSKRNKSEEEEVNNEDHKSKKKKS 325
Query: 300 LSSNHVTE 307
S+ +V +
Sbjct: 326 KSNTNVDQ 333
>At1g32800.1 68414.m04043 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 398
Score = 30.7 bits (66), Expect = 2.0
Identities = 28/117 (23%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
Query: 240 KHLLRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGN 299
K + G++ +DAK S+S D+ E V +S+ E G+ E G
Sbjct: 271 KGFVGKTGNRPASDAKPSESRKDIEAEGFTSDVGITKSVKAKKAALETGGDESGNTEIGV 330
Query: 300 LSSNHVTEALDAALKNGTGGRMFFKARHYRLRQQKQKEKSGSRFAPKTVRLTKLNKE 356
S + L NGTG + H+R+ + S + V + NKE
Sbjct: 331 ECSRE--QNLSDVHANGTGKQEEKAGHHFRIVLKSSATTDPSVLGGRDVPHNEANKE 385
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 248 DKNTTDAKGSDSISDVNVEAKKDRVRKKR--SLDGDVEEDSVRKSEKGSEEPGNLSSNHV 305
+K K ++ D E KDR R K S ++D K+ + E N N
Sbjct: 101 EKERNRHKDRENERDNEKEKDKDRARVKERASKKSHEDDDETHKAAERYEHSDNRGLNEG 160
Query: 306 TEALDAALKNGTGGRMFFKARHYRLRQQKQKE 337
+ +DAA + + R ++R++++K+
Sbjct: 161 GDNVDAASSGKEASALDLQNRILKMREERKKK 192
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 30.3 bits (65), Expect = 2.7
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 266 EAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTEALDAALKNGTGG-RMFFK 324
EAK ++++++S+D E++ + K E + G++++ + LK+G GG K
Sbjct: 229 EAKLKKIQERKSVDESGEKEKILKPEVVYTKSGHVATPKPESG--SGLKSGFGGVGEVVK 286
Query: 325 ARHYRLRQQKQKEKSGSRFAPKTVRLTKLNKE 356
+ +L +KEK + + +R ++ E
Sbjct: 287 SAEEKLGNLVEKEKKMGKGIMEKIRRKEITSE 318
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 243 LRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGN 299
+ + D DAK ++++ D + KK + KKR D E+++V + E ++ N
Sbjct: 37 MEEEPDHEDGDAKENNALIDEEPKKKKKKKNKKRGDTDDGEDEAVAEEEPKKKKKKN 93
>At3g58650.1 68416.m06537 expressed protein
Length = 723
Score = 29.9 bits (64), Expect = 3.6
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 13/155 (8%)
Query: 213 KSGAVKYSTQHRPTYYQSTNHYPLSRIKHLLRSQGDKNTTDAKGSDSISDVNVEAKKDRV 272
+SG++ S+ + + PLSR K L RS+ +N G D ++ + +
Sbjct: 287 ESGSISKSSGFTMSSAEKPTSLPLSRKKSLPRSKKPRNGVQESG--IYEDKRIKRGEKSI 344
Query: 273 RKKRSLDGD--VEEDSVRK-----SEKGSEEPGNLSSNH---VTEALDAALK-NGTGGRM 321
+ S+DGD +D ++ S S LSS H + D+A++ N GG
Sbjct: 345 KCNISIDGDSSTSKDDQKRDMDVISFTFSSSIKGLSSPHSQGTKQDADSAIRFNVIGGDS 404
Query: 322 FFKARHYRLRQQKQKEKSGSRFAPKTVRLTKLNKE 356
+LR+ K +S S + L+ ++K+
Sbjct: 405 LNALLEQKLRELTTKIESSSSSLIQEEPLSSISKD 439
>At1g31970.1 68414.m03931 DEAD/DEAH box helicase, putative similar
to p68 RNA helicase [Schizosaccharomyces pombe]
GI:173419
Length = 537
Score = 29.9 bits (64), Expect = 3.6
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 282 VEEDSVRKSEKGSEEPGNLSSNHVTEALDAALKNGTGGRMFFK-ARHYRLRQQKQKEKSG 340
VE K +K S++ + NH E + + NG + K + R R++K+ EK+
Sbjct: 17 VESPMTNKKKKKSKKNKHTEENHEVEEVPQEVTNGVEEELSNKEKKKKRKREEKESEKNK 76
Query: 341 SRFAPK 346
+ P+
Sbjct: 77 KKDVPE 82
>At5g17930.1 68418.m02102 MA3 domain-containing protein low
similarity to SP|Q9P6R9 Cell cycle control protein cwf22
{Schizosaccharomyces pombe}; contains Pfam profile
PF02847: MA3 domain
Length = 707
Score = 29.5 bits (63), Expect = 4.7
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 248 DKNTTDAKGSDSISDVNVEAKKDRVR---KKRSLDGDVEEDSVRKSEKGSEEPGNL-SSN 303
D +++ SD S+ K+DR R KK+S+D ++E D + ++ G E N S
Sbjct: 182 DLEHEESEFSDEESEEEPVGKRDRKRHKKKKKSVDEELESDLMNITDDGESETVNYHDSP 241
Query: 304 HVTEALDAAL-KNGTGGRMFFKARHYRLRQQKQKEK 338
E +D L + + A H R + + + E+
Sbjct: 242 SSLEKVDTPLHERKPESSSKYVAPHLRSQAKSESEE 277
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 246 QGDKNT-TDAKGSDSISDVNVEAKKDRVRKKRSLDG-DVEEDSVRKSEKGSEEPGNLSSN 303
+G++N T+ K S+S N ++K ++ + S D + ++ +K+++ E GN +SN
Sbjct: 403 EGNENKETEKKSSESQRKENTNSEK-KIEQVESTDSSNTQKGDEQKTDESKRESGNDTSN 461
Query: 304 HVTE 307
TE
Sbjct: 462 KETE 465
>At4g11780.1 68417.m01877 hypothetical protein
Length = 473
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 383 LRRRLEEVNEILMEKTC--VRIRELSEDEVGKYKDYLVIDDSPDYVTGR 429
++ R+ E N++L K + + L ED +G ++ L++ + D+V GR
Sbjct: 369 VKLRIGETNDLLASKVADNLLLDYLQEDNIGPKEETLMVKKAEDWVMGR 417
>At3g27730.1 68416.m03462 ATP-dependent DNA helicase, putative
similar to SP|P51979 ATP-dependent DNA helicase MER3 (EC
3.6.1.-) {Saccharomyces cerevisiae}; contains Pfam
profiles PF00270: DEAD/DEAH box helicase, PF02889: Sec63
domain
Length = 1113
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 80 NPDITPFPKNLNISENDEINSTIIDDDLKSTLDKLEITDEMEILIEEIHTVIDMAVSRAK 139
NP +T P N ++D + +IDDD + + +E + +I HTV D +AK
Sbjct: 871 NP-VTSGPSNRKDKKDDMPSFKLIDDDSEEEKEPYVTMEEDDCVIINEHTVFDHIREKAK 929
>At3g26210.1 68416.m03270 cytochrome P450 71B23, putative (CYP71B23)
Identical to Cytochrome P450 71B23
(SP:Q9LTM0)[Arabidopsis thaliana];contains Pfam profile:
PF00067 cytochrome P450
Length = 501
Score = 29.5 bits (63), Expect = 4.7
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 83 ITPFPKNLN--ISENDEINSTIIDDDLKSTLDKLEITDEMEILIEEIHTVIDMAVSRAKT 140
IT K+LN ++ D + ++DD LK LE D ++++I+ ++ + T
Sbjct: 231 ITGQSKSLNEIFADLDGFFNQVLDDHLKPGRKVLETPDVVDVMIDMMNKQSQDGSFKLTT 290
Query: 141 RHCNGTTKHNSVPKINVTNTDLSGAV-EIITN 171
H G + +N + T + A+ E+I N
Sbjct: 291 DHIKGIISDIFLAGVNTSATTILWAMTELIRN 322
>At2g29040.1 68415.m03530 exostosin family protein contains Pfam
profile: PF03016 exostosin family
Length = 720
Score = 29.5 bits (63), Expect = 4.7
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 266 EAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTEALDAALKNGTG 318
EAKKD V K++L D ++D ++++G E P + SSN V + D L+ G
Sbjct: 185 EAKKD-VEPKKALVDDNDDDL--ETKRGKELPNDSSSNVVEDDNDDDLETKKG 234
>At1g76780.1 68414.m08935 expressed protein ; expression supported by
MPSS
Length = 1871
Score = 29.5 bits (63), Expect = 4.7
Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 217 VKYSTQHRPTYYQSTNHYPLSRIKHLLRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKR 276
V+ + + RP +S H +I+ LL G + + + +++++ VE + +RV K+
Sbjct: 960 VQETKKERPGRLES--HDKRYKIQELLMEAGHNDRKEEEQNENVT-AEVELETERVSSKK 1016
Query: 277 SLDGDVEEDSVRKSEKGSE 295
+G +E+D+ K + E
Sbjct: 1017 VQEGKMEDDNSGKFHEFEE 1035
>At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contains
aminoacyl-transfer RNA synthetases class-II signature 1,
PROSITE:PS00179
Length = 766
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/58 (24%), Positives = 31/58 (53%)
Query: 240 KHLLRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEP 297
++L + + K ++ ++G + D + +D + + + EEDS+ SE+ S+EP
Sbjct: 546 EYLKKRKQKKLSSGSEGDEEKGDEEYKWDEDNAEYEEEEEEEEEEDSLSASEEDSDEP 603
>At1g10320.1 68414.m01162 U2 snRNP auxiliary factor-related similar
to U2 small nuclear ribonucleoprotein auxiliary factor
35 kD subunit related protein 1 (sp|Q15695)
Length = 757
Score = 29.5 bits (63), Expect = 4.7
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 252 TDAKGSDSISDVNVEAKKDRVRKK---RSLDGDVEEDSVRKSEKGSEE 296
+D K S S V ++ KDR R K R D E D RK ++ SEE
Sbjct: 666 SDKKRSVETSPVGYQSDKDRDRSKQRQRYKSDDPESDQSRKGKRQSEE 713
>At5g57160.1 68418.m07140 DNA ligase IV identical to DNA ligase IV
GI:9651815 from [Arabidopsis thaliana]; identical to cDNA
DNA ligase IV, GI:9651814
Length = 1219
Score = 29.1 bits (62), Expect = 6.2
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Query: 235 PLSRIKHLLRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGS 294
P S + S+G NT K S ++ ++ R ++ + GD E+S EK S
Sbjct: 943 PASSKIAITSSRGRSNTRAVKRGRSSTNSLQRVQRRRGKQPSKISGDETEESDASEEKVS 1002
Query: 295 EEPGNLSSNHVTEALDAALKNGTGGRMFFKAR-HYRLRQQKQKEKSGSRFA 344
+++ T++ A +N + G+ + + Q+ Q+ + G + A
Sbjct: 1003 TRLSDIAEE--TDSFGEAQRNSSRGKCAKRGKSRVGQTQRVQRSRRGKKAA 1051
>At5g02390.1 68418.m00162 expressed protein ; expression supported
by MPSS
Length = 835
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 245 SQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNH 304
SQ ++ T + D+ D V+A+ ++ R+ +LD + E S+++S + E P N+S+
Sbjct: 568 SQSSEHETLDQTMDASEDSPVDAETEQDREISTLDVEHETRSLKESSE--ESPNNVSTVD 625
Query: 305 VTE 307
+ E
Sbjct: 626 IDE 628
>At4g26950.1 68417.m03878 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 144
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 279 DGDVEEDSVRKSEKGSEEPGNLSSNHVTE 307
DGD +ED V G + P +SSNH T+
Sbjct: 13 DGDFQEDDVWDVLDGYQSPFMISSNHTTK 41
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 402 IRELSEDEVGKYKDYLVIDDSPDYVTGRVGGRQVPTQTI 440
+ +L++D GK+K Y + D R G R VPT I
Sbjct: 126 VDQLAKDFAGKFKFYKINTDESPNTANRYGIRSVPTVII 164
>At5g39750.1 68418.m04815 MADS-box family protein contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain); MADS-box protein
AGL81
Length = 355
Score = 28.7 bits (61), Expect = 8.2
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 34 DLRKIEVVYGPEC-LKR---DRQAKIDLCQSYPGV---ARRKRDVRISESLRINPDITPF 86
D+ + YGP+ LK +R+ D+ Y + RRK+ V + + L D T
Sbjct: 47 DIEACVIYYGPDGELKTWPPEREKVEDIALRYSQLNEALRRKKSVTLYDFLNKKKDKTNL 106
Query: 87 PKNLNISENDEINSTIID-DDLKSTLDKLEITDEMEILIEEIHTVIDMAVSRAK 139
K I++ND++ + + + + LK L D++ LI+ + + R +
Sbjct: 107 EKKAKITDNDDLKTCLKNVNILKYPLADHYSPDQVSQLIQSLEPHVSKVRERIR 160
>At5g04610.1 68418.m00462 spermidine synthase-related / putrescine
aminopropyltransferase-related contains weak similarity
to Spermidine synthase 2 (EC 2.5.1.16) (Putrescine
aminopropyltransferase 2) (SPDSY 2) (Swiss-Prot:O48659)
[Hyoscyamus niger]
Length = 434
Score = 28.7 bits (61), Expect = 8.2
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 77 LRINPDITPF-PKNLNISENDEINSTIIDDDLKSTLDKLEITDEM--EILIEEIHTVIDM 133
+R+ P + PK L E D++ I DD++ S+++ + E+LIE++ ID
Sbjct: 116 IRLKPLVVALLPKTLTREEIDDVPFLIYDDNVVSSVEIEKCVGPFVGEMLIEDVEIEIDD 175
Query: 134 AVSRAKTR 141
V + R
Sbjct: 176 GVREFRRR 183
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 28.7 bits (61), Expect = 8.2
Identities = 22/118 (18%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Query: 198 GYGSDDRCRQTYRSTKSGAVKYSTQHRPTYYQSTNHYPLSRIKHLLRSQGDKNTTDAKGS 257
G SD R KS + + ++ ++ + +H ++ S + + + S
Sbjct: 139 GSESDSEEEDRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDEDSKAEISAS 198
Query: 258 DSISDVNVEAKKDRVRKKRSLDGDVEEDSVRKSEKGSEEPGNLSSNHVTEALDAALKN 315
S + + ++K R +K+S D + K++ GS+ G + + +D +KN
Sbjct: 199 SSGEEEDTKSKSKR--RKKSSDSSSKRSKGEKTKSGSDSDGTEEDSKM--QVDETVKN 252
>At3g60470.1 68416.m06763 hypothetical protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 540
Score = 28.7 bits (61), Expect = 8.2
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 283 EEDSVRKSEK--GSEEPGNLSSNHVTEALDAALKNGTGGRMFFKARHYRLRQQKQKEKSG 340
+E + EK GS EP + ++ + G + K+R RL+ + +E S
Sbjct: 287 QEHKALRMEKTHGSGEPTKSTFRYIADLFRCVPMETLGSKREEKSRLERLKTHRMEETSH 346
Query: 341 SRFAPKTVRLTKLNKEFYEDRKWPSGVVRY-VIKDNAQYDV 380
+ KT L + K Y K S V++ + D DV
Sbjct: 347 GHGSKKTKEL-PIIKHMYNAAKLQSAGVKFKAVTDEFSIDV 386
>At3g44630.3 68416.m04798 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1240
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 348 VRLTKLNKEFYEDRKWPSGVVRYVIKDN 375
+ L K+N+E +D WPS ++ +K N
Sbjct: 1105 IMLVKVNEEMRDDEMWPSVLIAIRVKQN 1132
>At3g44630.2 68416.m04800 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 348 VRLTKLNKEFYEDRKWPSGVVRYVIKDN 375
+ L K+N+E +D WPS ++ +K N
Sbjct: 1105 IMLVKVNEEMRDDEMWPSVLIAIRVKQN 1132
>At3g44630.1 68416.m04799 disease resistance protein RPP1-WsB-like
(TIR-NBS-LRR class), putative domain signature
TIR-NBS-LRR exists, suggestive of a disease resistance
protein., closest Col-0 homolog to RPP1-WsB
Length = 1214
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 348 VRLTKLNKEFYEDRKWPSGVVRYVIKDN 375
+ L K+N+E +D WPS ++ +K N
Sbjct: 1105 IMLVKVNEEMRDDEMWPSVLIAIRVKQN 1132
>At1g76820.1 68414.m08939 expressed protein
Length = 266
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 242 LLRSQGDKNTTDAKGSDSISDVNVEAKKDRVRKKRSLDG-DVEED 285
+L S GD+ ++ +K SDS S VE+ + + KK++ G ++ED
Sbjct: 145 VLASIGDEESSQSKTSDSKSVELVESARSKKHKKKNKSGRTLQED 189
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.132 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,855,570
Number of Sequences: 28952
Number of extensions: 476117
Number of successful extensions: 1402
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1372
Number of HSP's gapped (non-prelim): 51
length of query: 445
length of database: 12,070,560
effective HSP length: 83
effective length of query: 362
effective length of database: 9,667,544
effective search space: 3499650928
effective search space used: 3499650928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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