GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001633-TA|BGIBMGA001633-PA|undefined
         (88 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   3.4  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    19   5.9  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query: 10  VLLFANPDGKRRCALKTEG 28
           +LLFA   G+R+ A K  G
Sbjct: 347 LLLFAEQMGQRQVAFKVGG 365


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 19.4 bits (38), Expect = 5.9
 Identities = 9/33 (27%), Positives = 13/33 (39%)

Query: 16  PDGKRRCALKTEGHSVFEPHLVTLGYDCLKSPY 48
           P   + C  K    +  EPH+    Y C+   Y
Sbjct: 101 PQPSQHCPRKHGYFAHEEPHICDKFYYCVDGKY 133


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.142    0.442 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,623
Number of Sequences: 317
Number of extensions: 878
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 88
length of database: 114,650
effective HSP length: 47
effective length of query: 41
effective length of database: 99,751
effective search space:  4089791
effective search space used:  4089791
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.0 bits)
S2: 37 (19.0 bits)