Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001633-TA|BGIBMGA001633-PA|undefined
(88 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 0.74
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 5.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 5.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 5.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 5.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 5.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 5.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 5.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 5.2
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 19 6.9
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 19 9.1
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 19 9.1
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 19 9.1
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 19 9.1
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 0.74
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 38 TLGYDCLKSPYIEMVIMKSLG---FPFEHNRPNRNLYVDILVENIQPGKFE 85
T G + LK Y+ V + L F F+ N Y I + I+PGK+E
Sbjct: 506 TKGTELLK--YLRKVDFEGLSGDKFKFDKNGDGPARYNIIHFKQIEPGKYE 554
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 5.2
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 38 TLGYDCLKSPYIEM 51
T+ Y C PY+++
Sbjct: 171 TITYQCCPEPYVDV 184
Score = 19.0 bits (37), Expect = 9.1
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 41 YDCLKSPYIEMVIMKSLGFPFEHNRPNR 68
++C+ V++ L F H P+R
Sbjct: 261 FNCIMFMVASSVVLTVLVLIFHHRTPDR 288
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 5.2
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 38 TLGYDCLKSPYIEM 51
T+ Y C PY+++
Sbjct: 171 TITYQCCPEPYVDV 184
Score = 19.0 bits (37), Expect = 9.1
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 41 YDCLKSPYIEMVIMKSLGFPFEHNRPNR 68
++C+ V++ L F H P+R
Sbjct: 261 FNCIMFMVASSVVLTVLVLIFHHRTPDR 288
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 5.2
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 38 TLGYDCLKSPYIEM 51
T+ Y C PY+++
Sbjct: 171 TITYQCCPEPYVDV 184
Score = 19.0 bits (37), Expect = 9.1
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 41 YDCLKSPYIEMVIMKSLGFPFEHNRPNR 68
++C+ V++ L F H P+R
Sbjct: 261 FNCIMFMVASSVVLTVLVLIFHHRTPDR 288
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 5.2
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 38 TLGYDCLKSPYIEM 51
T+ Y C PY+++
Sbjct: 171 TITYQCCPEPYVDV 184
Score = 19.0 bits (37), Expect = 9.1
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 41 YDCLKSPYIEMVIMKSLGFPFEHNRPNR 68
++C+ V++ L F H P+R
Sbjct: 261 FNCIMFMVASSVVLTVLVLIFHHRTPDR 288
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 5.2
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 38 TLGYDCLKSPYIEM 51
T+ Y C PY+++
Sbjct: 171 TITYQCCPEPYVDV 184
Score = 19.0 bits (37), Expect = 9.1
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 41 YDCLKSPYIEMVIMKSLGFPFEHNRPNR 68
++C+ V++ L F H P+R
Sbjct: 261 FNCIMFMVASSVVLTVLVLIFHHRTPDR 288
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 5.2
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 38 TLGYDCLKSPYIEM 51
T+ Y C PY+++
Sbjct: 171 TITYQCCPEPYVDV 184
Score = 19.0 bits (37), Expect = 9.1
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 41 YDCLKSPYIEMVIMKSLGFPFEHNRPNR 68
++C+ V++ L F H P+R
Sbjct: 261 FNCIMFMVASSVVLTVLVLIFHHRTPDR 288
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 5.2
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 38 TLGYDCLKSPYIEM 51
T+ Y C PY+++
Sbjct: 239 TITYQCCPEPYVDV 252
Score = 19.4 bits (38), Expect = 6.9
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 41 YDCLKSPYIEMVIMKSLGFPFEHNRPNR 68
++C+ V++ L F H P+R
Sbjct: 329 FNCIMFMVASSVVLTVLVLNFHHRTPDR 356
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 5.2
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 38 TLGYDCLKSPYIEM 51
T+ Y C PY+++
Sbjct: 239 TITYQCCPEPYVDV 252
Score = 19.4 bits (38), Expect = 6.9
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 41 YDCLKSPYIEMVIMKSLGFPFEHNRPNR 68
++C+ V++ L F H P+R
Sbjct: 329 FNCIMFMVASSVVLTVLVLNFHHRTPDR 356
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 19.4 bits (38), Expect = 6.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 27 EGHSVFEPHLVTLGYDC 43
E +++ E TL YDC
Sbjct: 116 ENYNLLEDIYETLSYDC 132
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 19.0 bits (37), Expect = 9.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 72 VDILVENIQPGKFENQ 87
VD L+ N + G++ NQ
Sbjct: 410 VDDLMRNTRCGRYHNQ 425
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 19.0 bits (37), Expect = 9.1
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 20 RRCALKTEGHSVFEPHLV 37
RR K + +FEPH +
Sbjct: 260 RRNFKKMQEEKIFEPHRI 277
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 19.0 bits (37), Expect = 9.1
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 41 YDCLKSPYIEMVIM 54
Y+C PYI++ +
Sbjct: 211 YNCCPEPYIDITFV 224
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 19.0 bits (37), Expect = 9.1
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 29 HSVFEPHLVTLGY 41
H+ E HL LGY
Sbjct: 97 HTCIENHLKQLGY 109
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.322 0.142 0.442
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,176
Number of Sequences: 429
Number of extensions: 1162
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of query: 88
length of database: 140,377
effective HSP length: 48
effective length of query: 40
effective length of database: 119,785
effective search space: 4791400
effective search space used: 4791400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (20.0 bits)
S2: 37 (19.0 bits)
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