Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001632-TA|BGIBMGA001632-PA|IPR007087|Zinc finger,
C2H2-type
(433 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 49 1e-06
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 42 1e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 37 0.005
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 34 0.045
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 34 0.045
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 33 0.059
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 33 0.10
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 32 0.18
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 31 0.31
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.31
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 31 0.42
SPBC6B1.04 |mde4||monopolin-like complex subunit Mde4|Schizosacc... 30 0.73
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 30 0.73
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 28 2.2
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 28 2.9
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 27 3.9
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 27 5.1
SPBC1709.14 |||peptide N-glycanase |Schizosaccharomyces pombe|ch... 27 5.1
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 27 6.8
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 27 6.8
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 27 6.8
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 27 6.8
SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces pom... 27 6.8
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 26 8.9
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 26 8.9
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 49.2 bits (112), Expect = 1e-06
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 20/150 (13%)
Query: 250 NCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVD 309
+C + F K Q H+ R E Y C +C K L+ R V
Sbjct: 150 DCELRFATKQKLQNHVNRAHEKIISYSCP----HESCVGH-EGFEKWSQLQNHIREAHVP 204
Query: 310 ANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSV--CGKSYSNQGAVRTHM- 366
+ C +CGR F +L+ H+ +TY C + C KS++ A++ H+
Sbjct: 205 S------CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHIS 258
Query: 367 ------IKFNCDKCPSTFSSPYTLNQHKKK 390
+ F+CD C + F + L +H ++
Sbjct: 259 VIHEGNMAFHCDSCGTKFGYKHMLQRHLER 288
Score = 35.9 bits (79), Expect = 0.011
Identities = 43/214 (20%), Positives = 81/214 (37%), Gaps = 32/214 (14%)
Query: 232 LDAMRKGKKYLEAEFKCYNCAVGFLFKDTYQAHMMRHEESNGEYRC--EVCTLRFACASV 289
++ RK K Y C C F ++H+ Y C + C LRFA
Sbjct: 104 IEVHRKPKPYACTWEGCDEC---FSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQK 160
Query: 290 LRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSC 349
L+ H + R+ ++ + + C + F + L+ H++ H SC
Sbjct: 161 LQNH-----VNRAHEKI-ISYSCPHESC-VGHEGFEKWSQLQNHIREAH-------VPSC 206
Query: 350 SVCGKSYSNQGAVRTHMI----------KFNC--DKCPSTFSSPYTLNQHKKKHDDVTAL 397
S+CG+ + +R H++ ++C + C +F+ L +H +
Sbjct: 207 SICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMA 266
Query: 398 HHCETCDVTYNSRKSLMAH-KRNTFAHQQTVYVH 430
HC++C + + L H +R T Y++
Sbjct: 267 FHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYIN 300
Score = 33.1 bits (72), Expect = 0.078
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 17/136 (12%)
Query: 293 HSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSV- 351
H S+E + ++ P CG+ + + L+QHL+ +N R + C
Sbjct: 3 HFNELSIEIESKNLRSAKKIFHCPYEECGKKYSRPSLLEQHLR----THSNERPFVCDYT 58
Query: 352 -CGKSYSNQGAVRTHM-----IK-FNC--DKCPSTFSSPYTLNQHKKKHDDVTALHHC-- 400
C K++ + ++ H +K F+C D C + F + L +H + H + C
Sbjct: 59 GCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKP-YACTW 117
Query: 401 ETCDVTYNSRKSLMAH 416
E CD ++ + L +H
Sbjct: 118 EGCDECFSKHQQLRSH 133
Score = 29.5 bits (63), Expect = 0.96
Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 28/162 (17%)
Query: 278 EVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRF 337
E C +++ S+L H +THS ER D G C + F ++LK H KR
Sbjct: 28 EECGKKYSRPSLLEQHLRTHSNERP---FVCDYTG-------CSKAFYRKSHLKIH-KRC 76
Query: 338 HNQKNNNRTYSCSV--CGKSYSNQGAVRTHM------IKFNC--DKCPSTFSSPYTLNQH 387
H N + +SC C + Q + H+ + C + C FS L H
Sbjct: 77 H---TNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSH 133
Query: 388 KKKHDDVTALHHC--ETCDVTYNSRKSLMAHKRNTFAHQQTV 427
+ C + C++ + +++ L H AH++ +
Sbjct: 134 ISACHTHLLPYPCTYQDCELRFATKQKLQNHVNR--AHEKII 173
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 42.3 bits (95), Expect = 1e-04
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 11/103 (10%)
Query: 294 SKTHSLERSRRRVKVDANGTQVPCHL-CGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVC 352
+K+ + S+ + + + G V C + F NLK H+ N N R + CS+C
Sbjct: 550 NKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHM----NTHTNYRPFQCSIC 605
Query: 353 GKSYSNQGAVRTHM-----IK-FNCDKCPSTFSSPYTLNQHKK 389
KS++ Q R H IK F C C F+ LN+H K
Sbjct: 606 KKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
Score = 36.7 bits (81), Expect = 0.006
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 20/119 (16%)
Query: 250 NCAVGFLFKDTYQAHMMRHEESNGEYRCEV--CTLRFACASVLRAHSKTHSLERSRRRVK 307
N VG +++ + +S G Y C C RF A L++H TH+
Sbjct: 545 NSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNTHT--------- 595
Query: 308 VDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNN-RTYSCSVCGKSYSNQGAVRTH 365
N C +C + F +QH KR H Q + + ++C C + ++ A+ H
Sbjct: 596 ---NYRPFQCSICKKSF-----ARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRH 646
Score = 27.1 bits (57), Expect = 5.1
Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 3/71 (4%)
Query: 246 FKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHSLERSRRR 305
F+C C F + + H H + C C RFA L H K+ + R
Sbjct: 600 FQCSICKKSFARQHDKRRHEQLHTGIKA-FACVTCNQRFARMDALNRHYKSEVGQNCLR- 657
Query: 306 VKVDANGTQVP 316
G QVP
Sbjct: 658 -TATERGIQVP 667
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 37.1 bits (82), Expect = 0.005
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 274 EYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQH 333
+Y CE CT FA L+ H ++H+ E+ ++D T CGR F L +H
Sbjct: 69 QYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTG-----CGRQFSRRDLLLRH 123
Query: 334 LKRFHN--QKNNNRTYSCSVCGKSYSNQGAVRTHM 366
++ H Q R + ++ S SN T++
Sbjct: 124 QQKIHRNPQPRRRRRSTTALPNPSLSNVSVSTTNL 158
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 33.9 bits (74), Expect = 0.045
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 331 KQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDK 373
K+HL+R N + +SCS C ++++ + H+ + + K
Sbjct: 40 KEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQK 82
Score = 31.5 bits (68), Expect = 0.24
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 300 ERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNN 343
E RR + N C C R F + L +H+++ H QK N
Sbjct: 41 EHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMHLQKQN 84
Score = 28.7 bits (61), Expect = 1.7
Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 374 CPSTFSSPYTLNQHKKKHDDVTALHHCETCDVTYNSRKSLMAHKRNTFAHQQTV 427
CP +F+ L +H++ H++V A C C+ + L H + +Q +
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAF-SCSFCNRAFARSDVLNRHVQQMHLQKQNL 85
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 33.9 bits (74), Expect = 0.045
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 344 NRTYSCSV--CGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDVTALHHCE 401
++ Y C V C K+Y NQ ++ H + +C P T +P + ++ + CE
Sbjct: 347 DKPYKCPVPNCDKAYKNQNGLKYHKLHGHCS--PITTPTPAPIPHQGFVVENKP--YRCE 402
Query: 402 TCDVTYNSRKSLMAHKRNTFAHQQ 425
C Y + L H+ T +H Q
Sbjct: 403 VCSKRYKNLNGLKYHR--THSHLQ 424
Score = 29.1 bits (62), Expect = 1.3
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 272 NGEYRCEVCTLRFACASVLRAHSKTHS 298
N YRCEVC+ R+ + L+ H +THS
Sbjct: 396 NKPYRCEVCSKRYKNLNGLKYH-RTHS 421
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 33.5 bits (73), Expect = 0.059
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 19/104 (18%)
Query: 270 ESNGEYRC--EVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDT 327
E++G+Y C C R A + +H +TH +R R C LC F+
Sbjct: 438 EADGKYVCLYNGCNKRIARKYNVESHIQTHLSDRPYR------------CDLCKAGFVRH 485
Query: 328 TNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNC 371
+LK+HL R H N R Y C C K ++ A+ H + C
Sbjct: 486 HDLKRHL-RIH---ENGRPYVCE-CLKRFNRLDALNRHKQRNIC 524
Score = 30.3 bits (65), Expect = 0.55
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 354 KSYSNQGAVRTHMIK--FNCDKCPSTFSSPYTLNQHKKKHDDVTALHHCETCDVTYNSRK 411
+ Y+ + ++TH+ + CD C + F + L +H + H++ + CE C +N
Sbjct: 456 RKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRP-YVCE-CLKRFNRLD 513
Query: 412 SLMAHKR 418
+L HK+
Sbjct: 514 ALNRHKQ 520
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 246 FKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSK 295
++C C GF+ + H+ HE Y CE C RF L H +
Sbjct: 473 YRCDLCKAGFVRHHDLKRHLRIHENGR-PYVCE-CLKRFNRLDALNRHKQ 520
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 243 EAEFKC-YN-CAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTH 297
+ ++ C YN C K ++H+ H S+ YRC++C F L+ H + H
Sbjct: 440 DGKYVCLYNGCNKRIARKYNVESHIQTHL-SDRPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 32.7 bits (71), Expect = 0.10
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 302 SRRRVKVDAN--GTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQ 359
S R+ V + G C C + F + +L++H++ H + + + C +CGK +S +
Sbjct: 408 SNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSE---KPFVC-ICGKRFSRR 463
Query: 360 GAVRTH 365
+R H
Sbjct: 464 DNLRQH 469
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 31.9 bits (69), Expect = 0.18
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 10/149 (6%)
Query: 54 RSKCLKRSSEYPSLFSEDVPIRLQRTD-----TECHILCPKSDSCQTLQTGYSSQYVCDE 108
R K + +++ L ED+ + ++ T ++ L D +TL+ +S + +E
Sbjct: 91 RKKHAESTADQDMLDEEDLELVMENTGQGSRFSKLRRLKRGRDQEETLENIFSEEEEEEE 150
Query: 109 RNLDENRKDADDYHVHQLQDE-RNYI--DYYEDLDALNEFYGNDNPIVDKGANALNVLDD 165
+D+ + H + DE ++I D +ED + E Y PI AL + DD
Sbjct: 151 NEVDDEAPNRTQGHRAGVIDEFADFIEQDEFEDEERQEEKYETGPPIESVRPEALGISDD 210
Query: 166 DNID-GEIEGSVPE-QIKIQNEFIEDHVQ 192
D I E+ G + +++E ED ++
Sbjct: 211 DYIQIYEVFGDGTDYAFALEDEDAEDELE 239
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 31.1 bits (67), Expect = 0.31
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 6/107 (5%)
Query: 246 FKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEV--CTLRFACASVLRAHSKTHSLERSR 303
+KC C F ++ +Q +R + C C RF+ + L H++ H+ SR
Sbjct: 26 YKCPLCTKAF-YRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSR 84
Query: 304 RRVKVDA---NGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTY 347
R A N + G + T N H+ N N +Y
Sbjct: 85 RNAAAAAAANNSARSSNSPAGNLEPSTNNAGVHMTNASMNPNVNPSY 131
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 31.1 bits (67), Expect = 0.31
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 10/109 (9%)
Query: 136 YEDLDALNEFYGNDNPIVDKGANALNVLDDDN--IDGEI-EGSVP---EQIKIQNEFIED 189
YE F+G+ + N +DD+ +D E+ E ++P E ++I N ED
Sbjct: 290 YEPNHRHTSFFGDTLSNLSSSLNDKKSPNDDHAVLDSELMEQTLPDSAEAVEIANNVKED 349
Query: 190 HVQMINDDGNEGSAKLDDXXXXXXXXXXXXXILTDLEEQKAVLDAMRKG 238
V NDD NE LD+ + EQ V+ + +G
Sbjct: 350 IVSTANDDANE----LDNTSEKATLETSSKPVTEQAIEQSEVVQEVEEG 394
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 30.7 bits (66), Expect = 0.42
Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 12/73 (16%)
Query: 270 ESNGEYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTN 329
+S + C+ C RF L H HS +PC C
Sbjct: 26 DSKRVFPCDQCAKRFTRHENLTRHKACHS------------KAEPIPCPYCEIKCKRKDL 73
Query: 330 LKQHLKRFHNQKN 342
LK+H++RFHN K+
Sbjct: 74 LKRHIQRFHNDKS 86
Score = 29.9 bits (64), Expect = 0.73
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 369 FNCDKCPSTFSSPYTLNQHKKKHDDVTALHHCETCDVTYNSRKSLMAHKRNTFAHQQTV 427
F CD+C F+ L +HK H + C C++ RK L+ F + ++V
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPI-PCPYCEIKC-KRKDLLKRHIQRFHNDKSV 87
>SPBC6B1.04 |mde4||monopolin-like complex subunit
Mde4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 29.9 bits (64), Expect = 0.73
Identities = 16/68 (23%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 76 LQRTDTECHILCPKSDSCQTLQTGYSSQYVCDERNLDENRKDADDYHVHQLQDERNYIDY 135
L+++ T+ +L D + LQ ++ + +E+ L++ + +A+DY + + E DY
Sbjct: 53 LKQSATDSELLHKNLDEIKFLQ----NEKLNNEKLLEQEQNEANDYRLKVERLEHKISDY 108
Query: 136 YEDLDALN 143
+++++LN
Sbjct: 109 VQEINSLN 116
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 29.9 bits (64), Expect = 0.73
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 356 YSNQGAVRTHMIKFNCD-KCPSTFSSPYTLN-----QHKKKHDDVTALHHCETCDVTYNS 409
+SN V +H + + K + +SP TLN K+ + A C+ CD+ +
Sbjct: 91 HSNTPTVVSHPVMSGSELKGEESHNSPGTLNGTSVANASKQPNMPNATFRCDKCDMMFVK 150
Query: 410 RKSLMAHKRNTFAHQQTVYV 429
+ L HKR T+ +TV +
Sbjct: 151 QSGLTNHKR-TYHQVETVVI 169
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 28.3 bits (60), Expect = 2.2
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 275 YRCEVCTLRFACASVLRAHSKT--HSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQ 332
+ C CT+ F A + H K+ H R+ + +V G+I ++
Sbjct: 5 FACTTCTVAFNNAESQKIHWKSDWHHYNLKRKVASLPPLSAEV---FAGKILSIQKQNEE 61
Query: 333 HLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHM 366
K+ +N C VC K + ++GA +HM
Sbjct: 62 VQKKAEFYQN------CEVCNKKFYSEGAYSSHM 89
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 269 EESNGEYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGT 313
++S + CEVC F +V AH K+ + ++ +R++ + T
Sbjct: 237 KDSTEAFYCEVCQKFFGKITVFEAHKKSKAHNKAVKRMQSSSPST 281
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 116 KDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPI 152
KDA+ +++H + NYI YY D Y D P+
Sbjct: 676 KDANRFYLHLGKLSENYIHYYVDSMYALFIYSTDIPL 712
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 148 NDNPIVDKGANALNVLDDDNIDGEIEGSVPEQIKIQNEFIEDHVQM 193
ND + A A ++L D++DGE + E+ K+ E ED + +
Sbjct: 194 NDTTVGIGAALAASILSVDSVDGEDTLTADEKRKLAQESKEDRMML 239
>SPBC1709.14 |||peptide N-glycanase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 333
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 314 QVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCG 353
Q PC CG T N + + N N Y C+VCG
Sbjct: 102 QPPCEKCGGETHMTGNGPPNEEEKWNGVRNVELYQCNVCG 141
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 311 NGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQ 359
NG + C CG IF + ++ Q H ++ + C VC + Y +
Sbjct: 153 NG-HIHCRKCGYIFCNFHSMYQIKLSIHATYDSENGFWCRVCRECYEGR 200
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 26.6 bits (56), Expect = 6.8
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 47 LNKLWLFRSKCLKRSSEYPSLFSEDVPIRLQRTDTECHILCPKSDSCQTLQTGYSSQYVC 106
L+ L F + LK+ + SLFS +V + + H + D CQ + Y+
Sbjct: 543 LSHLQNFSEELLKKRKLFSSLFSNNVSYKKSKKLKRTHTV---HDKCQ--KVAKLDHYIR 597
Query: 107 DERNLDENRKDADDY 121
D L+ ++ D Y
Sbjct: 598 DNIELNSKEREHDCY 612
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 26.6 bits (56), Expect = 6.8
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
Query: 316 PCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVC-GKSYSNQGAVRTHMIKFNCDKC 374
PC C D +KQHLK N C C GK S +G R K
Sbjct: 163 PCLSC-----DGKGVKQHLKHVGPHHVTNSQVICDTCNGKGVSFRGKDRCKHCK-GSGTV 216
Query: 375 PSTFSSPYTLNQHKKKHDDV 394
P + +N+ K++D +
Sbjct: 217 PEQRMLSFFVNRSAKENDKI 236
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 26.6 bits (56), Expect = 6.8
Identities = 27/144 (18%), Positives = 60/144 (41%), Gaps = 10/144 (6%)
Query: 68 FSEDVPIRLQRTDTEC-HILCPKSDSCQTLQTGYSSQYVCDERNLDEN-RKDADDYHVH- 124
F+E++P++ D E H++ P + T+ Q V DE + N +
Sbjct: 342 FTEEIPLKEDEKDNELEHLVSPATSVHTTVSDITGHQSVTDESDEQNNCMSTPPKIEIES 401
Query: 125 QLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALNVLDDDNIDGEIEGSVPEQIKIQN 184
++++E + + +++ + G + +K A+ + ++ E E + +Q
Sbjct: 402 KIEEEISVVSKSKEISSSVSSVGKEQNHTEKQV-AIETPEQQKVEKE-----DEHLNLQG 455
Query: 185 EFIEDHV-QMINDDGNEGSAKLDD 207
FIE+ Q I+ + S + D
Sbjct: 456 SFIEESTKQPISSKPSTSSPDMTD 479
>SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 307 KVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNN 344
K DA CH ++ D KQ++K FHN+ NN
Sbjct: 219 KSDALDIIAQCHQHWKVSRDR---KQYIKNFHNESVNN 253
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 8.9
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 355 SYSNQGAVRTHMIKFNCD--KCPSTFSSPYTL---NQHKKKHDD 393
S+ N G+ +TH + F+C+ K S+ SP + ++ KK+ D+
Sbjct: 75 SHGNSGSQKTHNVSFSCEIRKVKSSKLSPISNMEDSEDKKEEDE 118
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 26.2 bits (55), Expect = 8.9
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 272 NGEYRCEVCTLRFACASVL--RAHSKTHSLER 301
N Y+C VC C S L +HS TH+ R
Sbjct: 145 NVRYKCSVCDDYDICESCLTDNSHSNTHAFVR 176
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.134 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,137,768
Number of Sequences: 5004
Number of extensions: 98201
Number of successful extensions: 342
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 294
Number of HSP's gapped (non-prelim): 52
length of query: 433
length of database: 2,362,478
effective HSP length: 75
effective length of query: 358
effective length of database: 1,987,178
effective search space: 711409724
effective search space used: 711409724
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)
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