Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001632-TA|BGIBMGA001632-PA|IPR007087|Zinc finger,
C2H2-type
(433 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 74 3e-15
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 41 2e-05
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 41 2e-05
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 40 3e-05
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 36 7e-04
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 33 0.005
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 32 0.008
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 32 0.011
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 25 1.6
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 5.0
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 23 5.0
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 5.0
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 6.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.7
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 73.7 bits (173), Expect = 3e-15
Identities = 50/183 (27%), Positives = 75/183 (40%), Gaps = 24/183 (13%)
Query: 243 EAEFKCYNCAVGFLFKDTYQAHMMRH-EESNGEYRCEVCTLRFACASVLRAHSKTHSLER 301
E ++C C F K+ YQ+H+ H +E YRC +C FA + L H +TH+ E+
Sbjct: 59 EKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEK 118
Query: 302 SRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGA 361
+ C C + F NL H +R H ++ R Y C VC +++ + G
Sbjct: 119 PYQ------------CEYCSKSFSVKENLSVH-RRIHTKE---RPYKCDVCERAFEHSGK 162
Query: 362 VRTHM------IKFNCDKCPSTFSSPYTLNQHKKKHDDVTALHHCETCDVTYNSRKSLMA 415
+ HM C C TF L H + H + C+ C + K L
Sbjct: 163 LHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKP-YVCKACGKGFTCSKQLKV 221
Query: 416 HKR 418
H R
Sbjct: 222 HTR 224
Score = 65.3 bits (152), Expect = 9e-13
Identities = 42/173 (24%), Positives = 67/173 (38%), Gaps = 27/173 (15%)
Query: 243 EAEFKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHSLERS 302
E ++C C+ F K+ H H + Y+C+VC F + L H + H+ ER
Sbjct: 117 EKPYQCEYCSKSFSVKENLSVHRRIHTKER-PYKCDVCERAFEHSGKLHRHMRIHTGERP 175
Query: 303 RR----------------RVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRT 346
+ ++ C CG+ F + LK H + +K
Sbjct: 176 HKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEK----P 231
Query: 347 YSCSVCGKSYSNQGAVRTHMIK------FNCDKCPSTFSSPYTLNQHKKKHDD 393
Y+C +CGKS+ ++ H + + C C TF S T+ H K H D
Sbjct: 232 YTCDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKTHSD 284
Score = 48.8 bits (111), Expect = 9e-08
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 243 EAEFKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHSLERS 302
E KC C+ F+ HM H Y C+ C F C+ L+ H++TH+ E+
Sbjct: 173 ERPHKCTVCSKTFIQSGQLVIHMRTHTGEK-PYVCKACGKGFTCSKQLKVHTRTHTGEK- 230
Query: 303 RRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAV 362
C +CG+ F LK H + +K Y C++C +++ ++ +
Sbjct: 231 -----------PYTCDICGKSFGYNHVLKLHQVAHYGEK----VYKCTLCHETFGSKKTM 275
Query: 363 RTHMIKFNCDKCPSTFSSP 381
H IK + D S SP
Sbjct: 276 ELH-IKTHSDS--SVVGSP 291
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 40.7 bits (91), Expect = 2e-05
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 345 RTYSCSVCGKSYSNQGA----VRTHMIKFNCDKCPSTFSSPYTLNQHKKKH--DDVTALH 398
+++SC C K Y + GA +RTH + C C FS P+ L H + H + +
Sbjct: 15 KSFSCKYCEKVYVSLGALKMHIRTHTLPCKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQ 74
Query: 399 HC 400
HC
Sbjct: 75 HC 76
Score = 32.3 bits (70), Expect = 0.008
Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 18/88 (20%)
Query: 270 ESNGEYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTN 329
++ + C+ C + L+ H +TH+L CHLCG+ F
Sbjct: 12 QAKKSFSCKYCEKVYVSLGALKMHIRTHTLP--------------CKCHLCGKAFSRPWL 57
Query: 330 LKQHLKRFHNQKNNNRTYSCSVCGKSYS 357
L+ H++ +K +SC C ++++
Sbjct: 58 LQGHIRTHTGEK----PFSCQHCNRAFA 81
Score = 25.0 bits (52), Expect = 1.2
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 246 FKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHSLER 301
F C C ++ + H+ H +C +C F+ +L+ H +TH+ E+
Sbjct: 17 FSCKYCEKVYVSLGALKMHIRTHTLP---CKCHLCGKAFSRPWLLQGHIRTHTGEK 69
Score = 22.6 bits (46), Expect = 6.6
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 40 CHICRHILNKLWLFRSKCLKRSSEYP 65
CH+C ++ WL + + E P
Sbjct: 45 CHLCGKAFSRPWLLQGHIRTHTGEKP 70
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 40.7 bits (91), Expect = 2e-05
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 371 CDKCPSTFSSPYTLNQH-KKKHDDVTALHHCETCDVTYNSRKSLMAHK 417
C C FS Y+L +H + KH+ L+ CE C+ Y ++ SL HK
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHK 55
Score = 33.1 bits (72), Expect = 0.005
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 317 CHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH 365
C C R F +LK+H + H Q + Y C C + Y + ++ TH
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDT--LYVCEFCNRRYRTKNSLTTH 54
Score = 28.3 bits (60), Expect = 0.13
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 247 KCYNCAVGFLFKDTYQAHMM-RHEESNGEYRCEVCTLRFACASVLRAH 293
+C C F + + H +HE+S+ Y CE C R+ + L H
Sbjct: 7 ECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 40.3 bits (90), Expect = 3e-05
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 317 CHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFN 370
C LCG++ +LK+H+ H ++ Y C +C + Y ++ ++ TH+ ++
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEE--YRCVICERVYCSRNSLMTHIYTYH 59
Score = 34.7 bits (76), Expect = 0.002
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 369 FNCDKCPSTFSSPYTLNQH-KKKHDDVTALHHCETCDVTYNSRKSLMAH 416
F C C S +L +H KH + + C C+ Y SR SLM H
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTH 54
Score = 31.5 bits (68), Expect = 0.014
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 246 FKCYNCAVGFLFKDTYQAHMM-RHEESNGEYRCEVCTLRFACASVLRAHSKTHSLER 301
F C C K + + H+ +H E EYRC +C + + L H T+ R
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSR 62
Score = 23.4 bits (48), Expect = 3.8
Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 10/67 (14%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHL 334
+ C++C + C+ +A K H ++ R + + C +C R++ +L H+
Sbjct: 6 FTCQLCG-KVLCS---KASLKRHVADKHAERQE------EYRCVICERVYCSRNSLMTHI 55
Query: 335 KRFHNQK 341
+H +
Sbjct: 56 YTYHKSR 62
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 35.9 bits (79), Expect = 7e-04
Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 317 CHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH 365
C C +I T L++H++ H + + C++C + YS+ ++R H
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKEPI--CNICKRVYSSLNSLRNH 51
Score = 32.7 bits (71), Expect = 0.006
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 274 EYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQH 333
E+RCE C + LR H + S+ + C++C R++ +L+ H
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVHTRPSKEPI----------CNICKRVYSSLNSLRNH 51
Query: 334 LKRFHNQKNNN 344
+H Q + N
Sbjct: 52 KSIYHRQHSKN 62
Score = 27.9 bits (59), Expect = 0.18
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 368 KFNCDKCPSTFSSPYTLNQH-KKKHDDVTALHHCETCDVTYNSRKSLMAHK 417
+F C+ C +S L +H + H + C C Y+S SL HK
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHK 52
Score = 24.2 bits (50), Expect = 2.2
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Query: 245 EFKCYNCAVGFLFKDTYQAHMMR-HEESNGEYRCEVCTLRFACASVLRAHSKTHSLERSR 303
EF+C C + H+ H + E C +C ++ + LR H + + S+
Sbjct: 2 EFRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSK 61
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 33.1 bits (72), Expect = 0.005
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 243 EAEFKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHSLER 301
E F+C C F + HM H Y C C +F + LR H + H+ ER
Sbjct: 7 EKPFECPECHKRFTRDHHLKTHMRLHTGEK-PYHCSHCDRQFVQVANLRRHLRVHTGER 64
Score = 32.3 bits (70), Expect = 0.008
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 16/78 (20%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHL 334
+ C C RF L+ H + H+ E+ C C R F+ NL++HL
Sbjct: 10 FECPECHKRFTRDHHLKTHMRLHTGEKPYH------------CSHCDRQFVQVANLRRHL 57
Query: 335 KRFHNQKNNNRTYSCSVC 352
R H R Y+C +C
Sbjct: 58 -RVH---TGERPYACELC 71
Score = 27.9 bits (59), Expect = 0.18
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Query: 345 RTYSCSVCGKSYSNQGAVRTHM------IKFNCDKCPSTFSSPYTLNQHKKKHDDVTALH 398
+ + C C K ++ ++THM ++C C F L +H + H +
Sbjct: 8 KPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERP-Y 66
Query: 399 HCETC 403
CE C
Sbjct: 67 ACELC 71
Score = 26.2 bits (55), Expect = 0.54
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 317 CHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHM 366
C C + F +LK H+ R H + Y CS C + + +R H+
Sbjct: 12 CPECHKRFTRDHHLKTHM-RLHT---GEKPYHCSHCDRQFVQVANLRRHL 57
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 32.3 bits (70), Expect = 0.008
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 369 FNCDKCPSTFSSPYTLNQHK-KKHDDVTALHHCETCDVTYNSRKSLMAHK 417
+ CD C T S+ TL +HK ++H C C + + SL HK
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHK 421
Score = 31.1 bits (67), Expect = 0.019
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 312 GTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH 365
G C +CG+ LK+H ++ H Q N+ C++C K + ++ H
Sbjct: 369 GVCYTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAV--CALCHKVFRTLNSLNNH 420
Score = 27.9 bits (59), Expect = 0.18
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Query: 347 YSCSVCGKSYSNQGAVRTHMIKFN--------CDKCPSTFSSPYTLNQHK 388
Y+C VCGK+ S + ++ H + + C C F + +LN HK
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHK 421
Score = 25.0 bits (52), Expect = 1.2
Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 10/67 (14%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHL 334
Y C+VC + L+ H + + V C LC ++F +L H
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAV----------CALCHKVFRTLNSLNNHK 421
Query: 335 KRFHNQK 341
+H ++
Sbjct: 422 SIYHRRQ 428
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 31.9 bits (69), Expect = 0.011
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 369 FNCDKCPSTFSSPYTLNQHKKKHDDVTALHHCETCDVTYNSRKSLMAHKRNTFAH 423
F C+KC + + LN H K H +V + C C SL H R ++H
Sbjct: 17 FKCEKCSYSCVNKSMLNSHLKSHSNVYQ-YRCANCTYATKYCHSLKLHLRK-YSH 69
Score = 31.9 bits (69), Expect = 0.011
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 246 FKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHS 298
FKC C+ + K +H+ H +YRC CT L+ H + +S
Sbjct: 17 FKCEKCSYSCVNKSMLNSHLKSHSNVY-QYRCANCTYATKYCHSLKLHLRKYS 68
Score = 27.5 bits (58), Expect = 0.23
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 258 KDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHS 298
K + H+ H S ++CE C+ S+L +H K+HS
Sbjct: 1 KHHLEYHLRNHFGSK-PFKCEKCSYSCVNKSMLNSHLKSHS 40
Score = 25.4 bits (53), Expect = 0.94
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Query: 331 KQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHM------IKFNCDKCPSTFSSPYTL 384
K HL+ ++ + C C S N+ + +H+ ++ C C ++L
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSL 60
Query: 385 NQHKKKH 391
H +K+
Sbjct: 61 KLHLRKY 67
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 24.6 bits (51), Expect = 1.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 184 NEFIEDHVQMINDDGNEGSAKLDD 207
N+ I + + + DDG EG AK D
Sbjct: 180 NDNILESISYVKDDGTEGIAKSGD 203
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.0 bits (47), Expect = 5.0
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 331 KQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHK 388
K+ L K NN Y SV +S SNQ + T + + N + +T+ + LN K
Sbjct: 437 KRKLSDSTMNKINNHEYKRSVSRESNSNQFILMTTVNEGN-NNMAATYMNECLLNIQK 493
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 23.0 bits (47), Expect = 5.0
Identities = 8/29 (27%), Positives = 20/29 (68%)
Query: 345 RTYSCSVCGKSYSNQGAVRTHMIKFNCDK 373
R+ S+ GK+++N +++++I+F +K
Sbjct: 285 RSLQNSLNGKNFNNDDDIKSYLIQFFANK 313
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 23.0 bits (47), Expect = 5.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 329 NLKQHLKRFHNQKNNNR 345
N K + K +NQKNNN+
Sbjct: 433 NQKNNKKNANNQKNNNQ 449
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.6 bits (46), Expect = 6.6
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Query: 104 YVCDERNLDENRKDADD---YHVHQLQDERNY-----IDYYEDLDALNEF 145
YV ++N+ E D YH Q R + +D Y D +A+NEF
Sbjct: 31 YVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEF 80
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 8.7
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 110 NLDENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDN 150
+LDE D DY V + ++ N ++ ++ + F G+D+
Sbjct: 25 SLDEIEWDGGDYEVVESRELTNLVEIFDGRGTI--FEGHDD 63
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.320 0.134 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,108
Number of Sequences: 429
Number of extensions: 6314
Number of successful extensions: 80
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 40
length of query: 433
length of database: 140,377
effective HSP length: 60
effective length of query: 373
effective length of database: 114,637
effective search space: 42759601
effective search space used: 42759601
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)
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