Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001632-TA|BGIBMGA001632-PA|IPR007087|Zinc finger,
C2H2-type
(433 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 43 5e-04
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 43 5e-04
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 41 0.001
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 41 0.002
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 40 0.002
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 40 0.002
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 40 0.004
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 39 0.006
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 39 0.006
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 39 0.006
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 39 0.007
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 39 0.007
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 39 0.007
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 39 0.007
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 39 0.007
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 38 0.010
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 38 0.013
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 38 0.013
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 38 0.013
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 38 0.017
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 38 0.017
At5g53440.1 68418.m06641 expressed protein 37 0.030
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 37 0.030
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 37 0.030
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 36 0.040
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 36 0.040
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 36 0.040
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 35 0.12
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 34 0.16
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 34 0.16
At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein ... 34 0.21
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 33 0.49
At4g21030.1 68417.m03042 Dof-type zinc finger domain-containing ... 33 0.49
At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) famil... 33 0.49
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 32 0.65
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 32 0.65
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 32 0.65
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 32 0.65
At2g27470.1 68415.m03320 CCAAT-box binding transcription factor ... 32 0.65
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 31 1.1
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 31 1.1
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 31 1.1
At2g36930.1 68415.m04529 zinc finger (C2H2 type) family protein ... 31 1.1
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 31 1.5
At5g09750.1 68418.m01129 basic helix-loop-helix (bHLH) family pr... 31 1.5
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ... 31 1.5
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 31 2.0
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 31 2.0
At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein ... 30 2.6
At2g17740.1 68415.m02055 DC1 domain-containing protein 30 2.6
At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein ... 30 2.6
At5g60130.1 68418.m07538 transcriptional factor B3 family protei... 30 3.5
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 30 3.5
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 30 3.5
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 29 4.6
At5g28970.1 68418.m03584 Ulp1 protease family protein contains P... 29 4.6
At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein ... 29 4.6
At4g33740.2 68417.m04791 expressed protein 29 4.6
At4g33740.1 68417.m04790 expressed protein 29 4.6
At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein ... 29 4.6
At3g14900.1 68416.m01884 expressed protein 29 4.6
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 29 4.6
At1g29760.1 68414.m03639 expressed protein 29 4.6
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 29 6.0
At4g22580.1 68417.m03258 exostosin family protein contains Pfam ... 29 6.0
At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein ... 29 6.0
At3g42100.1 68416.m04322 AT hook motif-containing protein-relate... 29 6.0
At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identic... 29 6.0
At2g36230.1 68415.m04447 N'-5'-phosphoribosyl-formimino-5-aminoi... 29 6.0
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 29 6.0
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 29 6.0
At1g07480.2 68414.m00801 transcription factor IIA large subunit ... 29 6.0
At1g07480.1 68414.m00800 transcription factor IIA large subunit ... 29 6.0
At1g03280.1 68414.m00306 transcription initiation factor IIE (TF... 29 6.0
At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein ... 29 8.0
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 29 8.0
At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein ... 29 8.0
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 29 8.0
At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ... 29 8.0
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 29 8.0
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 29 8.0
At1g52410.2 68414.m05915 caldesmon-related weak similarity to Ca... 29 8.0
At1g52410.1 68414.m05914 caldesmon-related weak similarity to Ca... 29 8.0
At1g24260.1 68414.m03058 MADS-box protein (AGL9) strongly simila... 29 8.0
At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein ... 29 8.0
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 42.7 bits (96), Expect = 5e-04
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 19/132 (14%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSL-----ERSRRRVKVDA-NGTQVPCHLCGRIFMDTT 328
Y C+ C + + ++ H ++H ER +VD + + C CG F
Sbjct: 20 YLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQECGAEFKKPA 79
Query: 329 NLKQHLKRFHNQKNNNRTYSCSV--CGKSYSNQGAVRTHMIK-----FNCDK--CPSTFS 379
+LKQH++ H+ + R+++C V C SY + + H++ F C K C S FS
Sbjct: 80 HLKQHMQS-HSLE---RSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFS 135
Query: 380 SPYTLNQHKKKH 391
+ +H KK+
Sbjct: 136 VQGNVGRHVKKY 147
Score = 36.3 bits (80), Expect = 0.040
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 17/86 (19%)
Query: 320 CGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGA---VRTH-------MIKF 369
C + F + LK H++ H N C +CG + + +RTH IK
Sbjct: 254 CMKYFTNEECLKSHIRSCHQHIN------CEICGSKHLKKNIKRHLRTHDEDSSPGEIKC 307
Query: 370 NCDKCPSTFSSPYTLNQHKKK-HDDV 394
+ C STFS L +H K HDD+
Sbjct: 308 EVEGCSSTFSKASNLQKHMKAVHDDI 333
Score = 34.3 bits (75), Expect = 0.16
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 17/104 (16%)
Query: 269 EESNGEYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTT 328
EES+ + C+ C F + L+ H ++HSLERS D C +
Sbjct: 60 EESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDD----------CAASY---- 105
Query: 329 NLKQHLKRFHNQKNNNRTYSC--SVCGKSYSNQGAVRTHMIKFN 370
K HL R H + + + C C +S QG V H+ K++
Sbjct: 106 RRKDHLNR-HLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYH 148
Score = 30.7 bits (66), Expect = 2.0
Identities = 40/189 (21%), Positives = 62/189 (32%), Gaps = 11/189 (5%)
Query: 242 LEAEFKCY--NCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHSL 299
LE F CY +CA + KD H++ H+ + E C F+ + H K +
Sbjct: 90 LERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHS 149
Query: 300 ERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQ 359
+R + G + C D K + N G S
Sbjct: 150 NDNRDKDNTGL-GDGDKDNTCKG---DDDKEKSGSGGCEKENEGNGGSGKDNNGNGDSQP 205
Query: 360 GAVRTHMIKFNCDK--CPSTFSSPYTLNQHKKKH---DDVTALHHCETCDVTYNSRKSLM 414
T + C + C F P L +H+ H D V A C + + + L
Sbjct: 206 AECSTGQKQVVCKEIGCGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLK 265
Query: 415 AHKRNTFAH 423
+H R+ H
Sbjct: 266 SHIRSCHQH 274
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 42.7 bits (96), Expect = 5e-04
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 26/132 (19%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSL----------ERSRRRVKVDANGTQV---PCHLCG 321
Y CE+C F L+ H + H + E R+RV V T + PCH G
Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALG 129
Query: 322 RIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIK-----FNCDKCPS 376
D +K+H +R H+ N++ + C C K Y+ Q + H+ +CD C
Sbjct: 130 ----DLVGIKKHFRRKHS---NHKQWICERCSKGYAVQSDYKAHLKTCGTRGHSCD-CGR 181
Query: 377 TFSSPYTLNQHK 388
FS + +H+
Sbjct: 182 VFSRVESFIEHQ 193
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 41.1 bits (92), Expect = 0.001
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 19/139 (13%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSLE-RSRRRVKVDANGTQV---PCHLC-----G 321
+ + CE+C F L+ H + H+L + ++R K + +V P C
Sbjct: 78 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIKKKVYICPIKTCVHHDAS 137
Query: 322 RIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCPS 376
R D T +K+H R H +K + C C K Y+ Q + H ++ CD C +
Sbjct: 138 RALGDLTGIKKHYSRKHGEKK----WKCEKCSKKYAVQSDWKAHAKTCGTREYKCD-CGT 192
Query: 377 TFSSPYTLNQHKKKHDDVT 395
FS + H+ D +T
Sbjct: 193 LFSRKDSFITHRAFCDALT 211
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 40.7 bits (91), Expect = 0.002
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 18/131 (13%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSL-----ERSRRRVKVDANGT-QVPC--HLCGR 322
+ + CE+C F L+ H + H+L ++S + VK +V C H R
Sbjct: 59 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSCVHHDPSR 118
Query: 323 IFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCPST 377
D T +K+H R H +K + C C K Y+ Q + H ++ CD C +
Sbjct: 119 ALGDLTGIKKHFCRKHGEKK----WKCDKCSKKYAVQSDWKAHSKICGTKEYKCD-CGTL 173
Query: 378 FSSPYTLNQHK 388
FS + H+
Sbjct: 174 FSRRDSFITHR 184
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 40.3 bits (90), Expect = 0.002
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSL---------ERSRRRVKVDANGTQVPCHLCG 321
+ + CEVC F L+ H + H+L + R+RV V T V H
Sbjct: 62 ATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHH-SS 120
Query: 322 RIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCPS 376
R D T +K+H R H +K ++C C K Y+ Q + H ++ CD C +
Sbjct: 121 RALGDLTGIKKHFCRKHGEKK----WTCEKCAKRYAVQSDWKAHSKTCGTREYRCD-CGT 175
Query: 377 TFSSPYTLNQHK 388
FS + H+
Sbjct: 176 IFSRRDSFITHR 187
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 40.3 bits (90), Expect = 0.002
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 26/132 (19%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHS-----LERS-----RRRVKVDANGTQV---PCHLCG 321
Y CE+C F L+ H + H L+R ++RV V T + PCH G
Sbjct: 67 YICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALG 126
Query: 322 RIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIK-----FNCDKCPS 376
D +K+H +R H+ N++ + C C K Y+ Q + H+ +CD C
Sbjct: 127 ----DLVGIKKHFRRKHS---NHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCD-CGR 178
Query: 377 TFSSPYTLNQHK 388
FS + +H+
Sbjct: 179 VFSRVESFIEHQ 190
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 39.5 bits (88), Expect = 0.004
Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 18/131 (13%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSL-----ERSRRRVKVDANGTQVP-C--HLCGR 322
+ + CEVC F L+ H + H+L ++S + VK P C H R
Sbjct: 77 ATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSCVHHDPSR 136
Query: 323 IFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCPST 377
D T +K+H R H +K + C C K Y+ Q + H ++ CD C +
Sbjct: 137 ALGDLTGIKKHYYRKHGEKK----WKCDKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTL 191
Query: 378 FSSPYTLNQHK 388
FS + H+
Sbjct: 192 FSRRDSFITHR 202
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 39.1 bits (87), Expect = 0.006
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 18/131 (13%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSLE-RSRRRVKVDANGTQVPCHLCG-------R 322
+ + CE+C F L+ H + H+L + R+R + C + G R
Sbjct: 57 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSTKEVRKKVYVCPVSGCVHHDPSR 116
Query: 323 IFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCPST 377
D T +K+H R H +K + C C K Y+ Q + H ++ CD C +
Sbjct: 117 ALGDLTGIKKHFCRKHGEKK----WKCEKCSKKYAVQSDWKAHSKICGTKEYKCD-CGTL 171
Query: 378 FSSPYTLNQHK 388
FS + H+
Sbjct: 172 FSRRDSFITHR 182
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 39.1 bits (87), Expect = 0.006
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 21/133 (15%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLC---------- 320
+ + CE+C F L+ H + H+L ++ K + N + ++C
Sbjct: 2 ATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQ-KTNKNQVKKKVYICPEKSCVHHDP 60
Query: 321 GRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCP 375
R D T +K+H R H +K + C C K Y+ + H +F CD C
Sbjct: 61 ARALGDLTGIKKHFSRKHGEKK----WKCDKCSKKYAVISDWKAHNKICGSREFRCD-CG 115
Query: 376 STFSSPYTLNQHK 388
+ FS + H+
Sbjct: 116 TLFSRKDSFISHR 128
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 39.1 bits (87), Expect = 0.006
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 23/134 (17%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQ------VPCHLCG---RIFM 325
+ C VC F + L+ H H + R+ GTQ +PC+ C R +
Sbjct: 145 FSCHVCFKTFNRYNNLQMHMWGHGSQY--RKGPESLKGTQPRAMLGIPCYCCVEGCRNHI 202
Query: 326 DTTNLK-----QHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDK-----CP 375
D K + L+ + +K+ ++ +SC +CGK + +G RTH + NC K C
Sbjct: 203 DHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTH--EKNCGKRWVCVCG 260
Query: 376 STFSSPYTLNQHKK 389
S F +L H K
Sbjct: 261 SDFKHKRSLKDHVK 274
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 38.7 bits (86), Expect = 0.007
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 280 CTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHN 339
C F S LR HS H R+ D G CG+ F+D++ LK+H
Sbjct: 86 CGKTFFDVSALRKHSHIHG----ERQYVCDQEG-------CGKKFLDSSKLKRHYLIHTG 134
Query: 340 QKNNNRTYSCSVCGKSYSNQGAVRTHM---IKFNCDKCPSTFSSPYTLNQHKKKHDDVTA 396
++N TY CGK++S +R+HM + N CP + +++K K + V A
Sbjct: 135 ERNYICTY--EGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLK-NHVAA 191
Query: 397 LH 398
H
Sbjct: 192 YH 193
Score = 34.7 bits (76), Expect = 0.12
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 14/130 (10%)
Query: 243 EAEFKCYNCAVGFLFKDTYQAHMMRHEESNGEYRC--EVCTLRFACASVLRAHSKTHSLE 300
E F C G F D H +Y C E C +F +S L+ H H+ E
Sbjct: 76 EILFLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGE 135
Query: 301 RSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQG 360
R+ G CG+ F NL+ H+K H+Q+N + S C K Y+++
Sbjct: 136 RN---YICTYEG-------CGKAFSLDFNLRSHMKT-HSQENYH-ICPYSGCVKRYAHEY 183
Query: 361 AVRTHMIKFN 370
++ H+ ++
Sbjct: 184 KLKNHVAAYH 193
Score = 29.9 bits (64), Expect = 3.5
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 14/119 (11%)
Query: 232 LDAMRKGKK-YLEAEFKC--YNCAVGFLFKDTYQAHMMRHE-ESNGEYRCEVCTLRFACA 287
+ A+RK + E ++ C C FL + H + H E N E C F+
Sbjct: 93 VSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLD 152
Query: 288 SVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRT 346
LR+H KTHS E N P C + + LK H+ +H + T
Sbjct: 153 FNLRSHMKTHSQE----------NYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGET 201
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 38.7 bits (86), Expect = 0.007
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 270 ESNGEYRCEVCTLRFACASVLRAHSKTH-----SLERSRRRVKVDAN--GTQVPCHLCGR 322
+S +RC++C F C L H + H L R R K D + + P + +
Sbjct: 86 QSKSSHRCQICGKSFECYQALGGHRRLHRPIKGKLARKREYYKDDNSLFDSSGPSRVEEK 145
Query: 323 IFMDTTNLKQHL-------KRFHNQKNNNRTYSCSVCGKSY 356
I +D LKQ +F + ++ +Y C +CGKS+
Sbjct: 146 I-LDCVELKQDFGELLPLNSKFQKRPVSSCSYRCKICGKSF 185
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 38.7 bits (86), Expect = 0.007
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 21/133 (15%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSL----------ERSRRRVKVDANGTQVPCHLC 320
+ + CE+C F L+ H + H+L E+ +++V V T H
Sbjct: 78 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKEQQKKKVYVCPE-TNCAHHHP 136
Query: 321 GRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCP 375
R D T +K+H R H +K + C C K Y+ Q + H + CD C
Sbjct: 137 SRALGDLTGIKKHFCRKHGEKK----WKCEKCSKFYAVQSDWKAHTKICGTRDYRCD-CG 191
Query: 376 STFSSPYTLNQHK 388
+ FS T H+
Sbjct: 192 TLFSRKDTFITHR 204
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 38.7 bits (86), Expect = 0.007
Identities = 35/133 (26%), Positives = 55/133 (41%), Gaps = 27/133 (20%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSL-----------ERSRRRVKVDANGTQV---PCHLC 320
Y CE+C F L+ H + H + E R+RV V T + PCH
Sbjct: 39 YVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRKRVYVCPEPTCLHHDPCHAL 98
Query: 321 GRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIK-----FNCDKCP 375
G D +K+H +R H+ ++ + C C K Y+ Q + H+ +CD C
Sbjct: 99 G----DLVGIKKHFRRKHSV---HKQWVCERCSKGYAVQSDYKAHLKTCGSRGHSCD-CG 150
Query: 376 STFSSPYTLNQHK 388
FS + +H+
Sbjct: 151 RVFSRVESFIEHQ 163
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 38.7 bits (86), Expect = 0.007
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSL-----ERSRRRVKVDANGTQVP-C--HLCGR 322
+ + CEVC F L+ H + H+L ++S + V+ P C H R
Sbjct: 78 ATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSCVHHDPAR 137
Query: 323 IFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCPST 377
D T +K+H R H +K + C C K Y+ Q + H ++ CD C +
Sbjct: 138 ALGDLTGIKKHYYRKHGEKK----WKCDKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTI 192
Query: 378 FS 379
FS
Sbjct: 193 FS 194
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 38.3 bits (85), Expect = 0.010
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 19/132 (14%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSL-----ERSRRRV--KVDANGTQVPC--HLCG 321
+ + CE+C F L+ H + H+L +RS + V K + C H
Sbjct: 95 ATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEASCVHHDPS 154
Query: 322 RIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCPS 376
R D T +K+H R H +K + C C K Y+ Q + H ++ CD C +
Sbjct: 155 RALGDLTGIKKHFCRKHGEKK----WKCDKCSKKYAVQSDCKAHSKTCGTKEYRCD-CGT 209
Query: 377 TFSSPYTLNQHK 388
FS + H+
Sbjct: 210 LFSRRDSFITHR 221
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 37.9 bits (84), Expect = 0.013
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSL-----ERSRRRVKVDANGTQVP-C--HLCGR 322
+ + C+VC F L+ H + H+L ++S + VK P C H R
Sbjct: 79 ATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPSR 138
Query: 323 IFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCPST 377
D T +K+H R H +K + C C K Y+ Q + H ++ CD C +
Sbjct: 139 ALGDLTGIKKHYYRKHGEKK----WKCEKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTI 193
Query: 378 FS 379
FS
Sbjct: 194 FS 195
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 37.9 bits (84), Expect = 0.013
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 326 DTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDK-----CPSTFSS 380
D L+ H KR H K ++C +CGK+++ +G RTH + NC K C S F
Sbjct: 245 DFRTLQTHYKRKHGSK----PFACRMCGKAFAVKGDWRTH--EKNCGKLWYCSCGSDFKH 298
Query: 381 PYTLNQHKK 389
+L H K
Sbjct: 299 KRSLKDHVK 307
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 37.9 bits (84), Expect = 0.013
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 274 EYRCEVCTLRFACASVLRAHSKTHSLE-----RSRRRVKVDANGTQVPCHLCGRIFMDTT 328
++ C +C+ F + ++ H H E S + A ++PC+ C +
Sbjct: 179 QFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNI 238
Query: 329 N------LKQH--LKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDK-----CP 375
N LK L+ + +K+ ++ +SC CGK+ + +G RTH + NC K C
Sbjct: 239 NHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTH--EKNCGKLWYCTCG 296
Query: 376 STFSSPYTLNQH 387
S F +L H
Sbjct: 297 SDFKHKRSLKDH 308
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 37.5 bits (83), Expect = 0.017
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 21/133 (15%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSL----------ERSRRRVKVDANGTQVPCHLC 320
+ + CEVC F L+ H + H+L E+ +++V + T V H
Sbjct: 64 TTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTNKEQVKKKVYICPEKTCVH-HDP 122
Query: 321 GRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCP 375
R D T +K+H R H +K + C C K Y+ + H ++ CD C
Sbjct: 123 ARALGDLTGIKKHFSRKHGEKK----WKCDKCSKKYAVMSDWKAHSKICGTKEYRCD-CG 177
Query: 376 STFSSPYTLNQHK 388
+ FS + H+
Sbjct: 178 TLFSRKDSFITHR 190
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 37.5 bits (83), Expect = 0.017
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 19/132 (14%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSLE-RSRRRVKVDANGTQV------PC--HLCG 321
+ + CEVC F L+ H + H+L + ++R D +V C H
Sbjct: 88 ATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSNKDVVRKKVYVCPEPGCVHHHPS 147
Query: 322 RIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCPS 376
R D T +K+H R H +K + C C K Y+ Q + H ++ CD C +
Sbjct: 148 RALGDLTGIKKHFFRKHGEKK----WKCEKCSKKYAVQSDWKAHAKTCGTKEYKCD-CGT 202
Query: 377 TFSSPYTLNQHK 388
FS + H+
Sbjct: 203 LFSRRDSFITHR 214
>At5g53440.1 68418.m06641 expressed protein
Length = 1181
Score = 36.7 bits (81), Expect = 0.030
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 147 GNDNPIVDKGANALNVLDDDNIDGEIEGSVPEQIKIQNEFIE-DHVQMINDDGNEGSAKL 205
G+ +P D ALN + D+I+G E + I+ E + DH+ +G+E AKL
Sbjct: 1017 GSSSPNPDNSPEALNAVSSDHIEGSEEAMASDHIEGSEEAVALDHI-----EGDEQEAKL 1071
Query: 206 DD 207
DD
Sbjct: 1072 DD 1073
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 36.7 bits (81), Expect = 0.030
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 318 HLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDK---- 373
H R D L+ H KR H R ++C CGK+++ +G RTH + NC K
Sbjct: 315 HPRARPLKDFRTLQTHYKRKHGV----RPFACRRCGKAFAVKGDWRTH--EKNCGKLWYC 368
Query: 374 -CPSTFSSPYTLNQHKK 389
C S F +L H K
Sbjct: 369 SCGSDFKHKRSLKDHVK 385
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 36.7 bits (81), Expect = 0.030
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 18/131 (13%)
Query: 271 SNGEYRCEVCTLRFACASVLRAHSKTHSLE-RSRRRVKVDANGTQVPC-------HLCGR 322
+ + CE+C F L+ H + H+L + ++R + C H R
Sbjct: 66 ATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHHHPTR 125
Query: 323 IFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH-----MIKFNCDKCPST 377
D T +K+H R H +K + C C K Y+ Q + H ++ CD C +
Sbjct: 126 ALGDLTGIKKHFCRKHGEKK----WKCEKCAKRYAVQSDWKAHSKTCGTREYRCD-CGTI 180
Query: 378 FSSPYTLNQHK 388
FS + H+
Sbjct: 181 FSRRDSFITHR 191
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 36.3 bits (80), Expect = 0.040
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 23/135 (17%)
Query: 274 EYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQ------VPCHLCG---RIF 324
++ C VC F + ++ H H + R+ GTQ +PC+ C R
Sbjct: 216 QFSCPVCFKTFNRYNNMQMHMWGHGSQY--RKGPESLRGTQPTGMLRLPCYCCAPGCRNN 273
Query: 325 MDTTNLK-----QHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDK-----C 374
+D K + L+ + +K+ + + C CGK+++ +G RTH + NC K C
Sbjct: 274 IDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTH--EKNCGKLWYCIC 331
Query: 375 PSTFSSPYTLNQHKK 389
S F +L H K
Sbjct: 332 GSDFKHKRSLKDHIK 346
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 36.3 bits (80), Expect = 0.040
Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 9/113 (7%)
Query: 320 CGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCP-STF 378
C I T+ +KQ H + + + + C C K +S+ A+ H K
Sbjct: 20 CLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQK 79
Query: 379 SSPYTLNQHKKKHDDVTALHHCETCDVTYNSRKSLMAHKRNTFAHQQTVYVHP 431
+ N +K H H C C ++ + ++L H R H+ ++ V P
Sbjct: 80 DVKHLSNDYKGNH-----FHKCSICSQSFGTGQALGGHMRR---HRSSMTVEP 124
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 262 QAHMMRHEESN--GEYRCEVCTLRFACASVLRAHSKTHSL------ERSRRRVKVDANGT 313
Q + +H ES+ ++ C+ C RF+ L H +H ++ + + D G
Sbjct: 32 QIGLNQHTESHTSNQFECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGN 91
Query: 314 QV-PCHLCGRIFMDTTNLKQHLKR 336
C +C + F L H++R
Sbjct: 92 HFHKCSICSQSFGTGQALGGHMRR 115
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 36.3 bits (80), Expect = 0.040
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 17/86 (19%)
Query: 320 CGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGA---VRTH-------MIKF 369
C + F + LK H++ H N C +CG + + +RTH IK
Sbjct: 166 CMKYFTNEECLKSHIRSCHQHIN------CEICGSKHLKKNIKRHLRTHDEDSSPGEIKC 219
Query: 370 NCDKCPSTFSSPYTLNQHKKK-HDDV 394
+ C STFS L +H K HDD+
Sbjct: 220 EVEGCSSTFSKASNLQKHMKAVHDDI 245
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 34.7 bits (76), Expect = 0.12
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 340 QKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDVTALHH 399
+K N+ + C C K + + A+ H K T ++ KKK T+ HH
Sbjct: 153 KKKRNKWFECETCEKVFKSYQALGGHRASHK-KKIAET--DQLGSDELKKKKKKSTSSHH 209
Query: 400 -CETCDVTYNSRKSLMAHKRN 419
C C + S ++L HKR+
Sbjct: 210 ECPICAKVFTSGQALGGHKRS 230
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 34.3 bits (75), Expect = 0.16
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 342 NNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDVTA----L 397
++ + Y CSVCGKS+ + A+ H +S T+ + + +
Sbjct: 89 DHQKDYKCSVCGKSFPSYQALGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSGKT 148
Query: 398 HHCETCDVTYNSRKSLMAHKR 418
H+C C ++ S ++L HKR
Sbjct: 149 HNCSICFKSFPSGQALGGHKR 169
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 34.3 bits (75), Expect = 0.16
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 14/106 (13%)
Query: 274 EYRCEVCTLRFACASVLRAHSKTHSLERSR--------RRVKVDANGTQVPCHL-----C 320
++ C+ C+ RF C L H +TH E S + +D NG Q L
Sbjct: 8 KFVCKFCSKRFPCGKSLGGHIRTHMNENSADSDEDEADKLKMIDENGGQSSYGLRENPKK 67
Query: 321 GRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHM 366
+ F+D + LK+ Q+ C CGK + + A+ HM
Sbjct: 68 NKRFVDHRQI-MALKQQQQQQQLQELRRCRECGKGFVSSKALCGHM 112
>At3g10470.1 68416.m01255 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 398
Score = 33.9 bits (74), Expect = 0.21
Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSLER------SRRRVKVDANGTQVPCHLCGRIFMDTT 328
Y+C+ C F L H +H + S K V HL +
Sbjct: 182 YQCKTCDRTFPSFQALGGHRASHKKPKAAMGLHSNHDHKKSNYDDAVSLHLNNVLTTTPN 241
Query: 329 NLKQHLKRF-HNQKNNNRTYSCSVCGKSYSNQGAVRTHM 366
N H + + +NN+ + C +CG +++ A+ HM
Sbjct: 242 NNSNHRSLVVYGKGSNNKVHECGICGAEFTSGQALGGHM 280
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 32.7 bits (71), Expect = 0.49
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSLERSRRRVK-VDANGTQVPCHLCGRIFMDTTNLKQH 333
Y+C+ C F L H +H ++ +D + TT K +
Sbjct: 153 YQCKTCDRTFPSFQALGGHRASHKKPKAASFYSNLDLKKNTYANDAVSLVHTTTTVFKNN 212
Query: 334 LKR---FHNQKNNNRTYSCSVCGKSYSNQGAVRTHM 366
R + + + N+ + C +CG +++ A+ HM
Sbjct: 213 NSRSLVVYGKASKNKVHECGICGAEFTSGQALGGHM 248
Score = 30.3 bits (65), Expect = 2.6
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 342 NNNRTY---SCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDVTALH 398
NNN TY S S SN G + + + C C TF S L H+ H A
Sbjct: 124 NNNNTYRFTSRRFLETSSSNSGGKAGYYV-YQCKTCDRTFPSFQALGGHRASHKKPKAAS 182
Query: 399 HCETCDVTYNS 409
D+ N+
Sbjct: 183 FYSNLDLKKNT 193
>At4g21030.1 68417.m03042 Dof-type zinc finger domain-containing
protein prolamin box binding factor, Zea mays,
PID:g2393775
Length = 194
Score = 32.7 bits (71), Expect = 0.49
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 316 PCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDK 373
P +C R + D T F+N K + Y C C + +++ G +R + CDK
Sbjct: 19 PPRVCPRCYSDQTRFSY----FNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDK 72
>At2g41835.1 68415.m05170 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 279
Score = 32.7 bits (71), Expect = 0.49
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 256 LFKDTYQAHMMRHEESNGEYR-CEVCTLRFACASVLRAH-SKTHSLERSRRRVKVDANGT 313
L D Q + NG C C +F+ + L H KTH ER++++ N T
Sbjct: 193 LGNDISQKLQFSSSKDNGIVEVCPQCGAKFSSVTSLVEHVEKTH--ERNKKQNH--GNVT 248
Query: 314 QVPCHLCGRIFMDTTNLKQHLKRFH 338
C C R F D +L H++R H
Sbjct: 249 VDVCPRCSRGFRDPVDLVNHIERDH 273
Score = 32.3 bits (70), Expect = 0.65
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 311 NGTQVPCHLCGRIFMDTTNLKQHLKRFH--NQKNNNRTYSCSVC 352
NG C CG F T+L +H+++ H N+K N+ + VC
Sbjct: 209 NGIVEVCPQCGAKFSSVTSLVEHVEKTHERNKKQNHGNVTVDVC 252
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 32.3 bits (70), Expect = 0.65
Identities = 16/81 (19%), Positives = 32/81 (39%)
Query: 339 NQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDVTALH 398
N+ Y C CGK + + A+ H ++ + + + ++ +H
Sbjct: 165 NRATTKGRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIH 224
Query: 399 HCETCDVTYNSRKSLMAHKRN 419
C C + S ++L HKR+
Sbjct: 225 ECPICLRVFASGQALGGHKRS 245
Score = 31.5 bits (68), Expect = 1.1
Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 317 CHLCGRIFMDTTNLKQH-LKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCP 375
C CG++F L H N+ +NN+T S Y N V + C C
Sbjct: 175 CETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSET--EYDNVVVVAKRI--HECPICL 230
Query: 376 STFSSPYTLNQHKKKH 391
F+S L HK+ H
Sbjct: 231 RVFASGQALGGHKRSH 246
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 32.3 bits (70), Expect = 0.65
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Query: 339 NQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDVTALH 398
++ N+N + C C + + + A+ H K P + +H+ K +D +H
Sbjct: 41 SKTNHNNHFECKTCNRKFDSFQALGGHRASH---KKPKLIVDQEQV-KHRNKEND---MH 93
Query: 399 HCETCDVTYNSRKSLMAHKR 418
C CD + + ++L H R
Sbjct: 94 KCTICDQMFGTGQALGGHMR 113
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 32.3 bits (70), Expect = 0.65
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 11/87 (12%)
Query: 337 FHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPST----FSSPYTLNQHKKKHD 392
+ + K+ R + C CGK + + A+ H +K T + Y L +KK
Sbjct: 185 YKSSKSRGR-FKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKK-- 241
Query: 393 DVTALHHCETCDVTYNSRKSLMAHKRN 419
+H C C + S ++L HKR+
Sbjct: 242 ----VHECPICFRVFTSGQALGGHKRS 264
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 32.3 bits (70), Expect = 0.65
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHL 334
Y C+ C F+ L H +H R+ K TQ ++ K
Sbjct: 113 YECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEE--GQNSHFKVSG 170
Query: 335 KRFHNQKNN-----NRTYSCSVCGKSYSNQGAVRTHM 366
+Q +N N+ + CS+CG +++ A+ HM
Sbjct: 171 SALASQASNIINKANKVHECSICGSEFTSGQALGGHM 207
>At2g27470.1 68415.m03320 CCAAT-box binding transcription factor
subunit HAP3-related contains Pfam PF00808 :
Histone-like transcription factor (CBF/NF-Y) and
archaeal histone; similar to polymerase epsilon p17
subunit (DNA polymerase epsilon subunit 3) (YB-like
protein 1) (YBL1) (NF-YB-like protein) (SP:Q9JKP7) [Mus
musculus];
Length = 275
Score = 32.3 bits (70), Expect = 0.65
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 107 DERNLDENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALNVLDDD 166
DE N DEN ++ + ++ +DE N + E+ +E GN++ +++ + + D++
Sbjct: 200 DEENDDENTEENGNDEENEKEDEENSM---EENGNESEESGNEDHSMEENGSGVGE-DNE 255
Query: 167 NIDGEIEGSVPE 178
N DG + GS E
Sbjct: 256 NEDGSVSGSGEE 267
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 324 FMDTTN--LKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSP 381
+ D+ N ++ + HN + C S N+ T F+C+ C TF S
Sbjct: 14 YQDSLNQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSS 73
Query: 382 YTLNQHKKKH 391
L H+ H
Sbjct: 74 QALGGHQNAH 83
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 31.5 bits (68), Expect = 1.1
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 112 DENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALNVLDDDNIDGE 171
D++ D DD + +DE + +DLD + G+++ D G + L+ +DN D
Sbjct: 1736 DDSDPDDDD----ETEDEDEDDEEEDDLDRILGLAGDNS---DSGDDDLS--SEDNEDSV 1786
Query: 172 IEGSVPEQIKIQNEFIEDHVQMINDDGNEGSAKLDD 207
+ I I +F+E+ ++ N+D G + DD
Sbjct: 1787 SDFDEEADILIDGDFMEELIEGENEDDGNGEDEDDD 1822
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 31.5 bits (68), Expect = 1.1
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 269 EESNGEYRCEVCTLRFACASVLRAHSKTH 297
++S Y+C +C F C+ L +H + H
Sbjct: 439 KKSRSSYKCSICEKSFVCSQALGSHQRLH 467
Score = 29.9 bits (64), Expect = 3.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 267 RHEESNGEYRCEVCTLRFACASVLRAHSKTH 297
R E S+ Y C+VC F C L H+K H
Sbjct: 90 RPESSSSCYECKVCGKIFGCYRGLGGHTKLH 120
Score = 28.7 bits (61), Expect = 8.0
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 324 FMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTH 365
FMD LK R QK + +Y CS+C KS+ A+ +H
Sbjct: 423 FMDL-ELKPCPLRRKLQKKSRSSYKCSICEKSFVCSQALGSH 463
>At2g36930.1 68415.m04529 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type,
domain; weak similarity to Zinc finger protein T86
(Swiss-Prot:O00488) [Homo sapiens]
Length = 198
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 273 GEYRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFM 325
G++ C +C F+ ASV+ H KT ++ ++++ A +Q+ L G + M
Sbjct: 136 GQFNCLLCHRNFSNASVMDYHFKTKKHKKRVKKIERPAPHSQLDADLAGGMGM 188
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 31.1 bits (67), Expect = 1.5
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 16/93 (17%)
Query: 342 NNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTL--NQHKKKHD---DVTA 396
+++R Y C+VCGKS+S+ A+ H S S L N H +VT
Sbjct: 92 SDHRDYKCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTV 151
Query: 397 -----------LHHCETCDVTYNSRKSLMAHKR 418
+H C C ++ S ++L HKR
Sbjct: 152 NTGNGVSQSGKIHTCSICFKSFASGQALGGHKR 184
>At5g09750.1 68418.m01129 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 224
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/93 (22%), Positives = 34/93 (36%)
Query: 112 DENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALNVLDDDNIDGE 171
+ N K+ D +H H +D Y L N F + P + +L D D E
Sbjct: 24 NNNNKNDDHHHQHNNDPIGMAMDQYTQLHIFNPFSSSHFPPLSSSLTTTTLLSGDQEDDE 83
Query: 172 IEGSVPEQIKIQNEFIEDHVQMINDDGNEGSAK 204
E E++ E + M + D + + K
Sbjct: 84 DEEEPLEELGAMKEMMYKIAAMQSVDIDPATVK 116
>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 215
Score = 31.1 bits (67), Expect = 1.5
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 257 FKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHSLERS--RRRVKVDAN 311
F+ + R+E + C C F+ + L H H ERS +RR +++ N
Sbjct: 49 FRFLFNESSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIEIN 105
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 30.7 bits (66), Expect = 2.0
Identities = 23/100 (23%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Query: 272 NGEYRCEVCTLRFACASVLRAHSKTHSLERSRRRV-----KVDANGTQVPCHLCGRIFMD 326
+G Y+C+ C F L H +H + V K A+ + V G +
Sbjct: 115 DGVYQCKTCDKSFHSFQALGGHRASHKKPKLGASVFKCVEKKTASASTVETVEAGAV--- 171
Query: 327 TTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHM 366
+ L + K +T+ CS+C +S+ A+ HM
Sbjct: 172 GSFLSLQVTSSDGSKKPEKTHECSICKAEFSSGQALGGHM 211
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVP 316
Y C C F A L H H +R+R R++ + + P
Sbjct: 47 YTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTP 88
>At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein
(ZAT7) identical to zinc finger protein ZAT7
[Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains
Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 168
Score = 30.3 bits (65), Expect = 2.6
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHS-LERSRRRVKVDA-----NGTQVPCHLCGRIFMDTT 328
+RC+ C F+ L H +H L S + + T PC +CG F
Sbjct: 40 FRCKTCLKEFSSFQALGGHRASHKKLINSDNPSLLGSLSNKKTKTSHPCPICGVKFPMGQ 99
Query: 329 NLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDK 373
L H++R N+K S S+ +S+ + T + KF+ K
Sbjct: 100 ALGGHMRRHRNEK-----VSGSLVTRSFLPETTTVTALKKFSSGK 139
>At2g17740.1 68415.m02055 DC1 domain-containing protein
Length = 248
Score = 30.3 bits (65), Expect = 2.6
Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 338 HNQKNNNRTYSCSVCGK---SYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDV 394
++ +NNN TY+C CG+ ++ ++ + + C P T ++ +
Sbjct: 77 YSPQNNNSTYTCDACGEYGSGFTYNCSICQYDVHVGCVSVPETMKHDEHVHPLALIYKAP 136
Query: 395 TALHHCETCDV 405
H TCDV
Sbjct: 137 CPKDHIFTCDV 147
>At1g68480.1 68414.m07823 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 253
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 269 EESNGEYRCEVCTLRFACASVLRAHSKTHSLER 301
+ES Y C C+L+F + L H H ER
Sbjct: 45 DESGKVYECRFCSLKFCKSQALGGHMNRHRQER 77
>At5g60130.1 68418.m07538 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 300
Score = 29.9 bits (64), Expect = 3.5
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 112 DENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALNVLDDDNIDGE 171
+E + ++D +Q D+ +D ED D + G DN D A DD++ D E
Sbjct: 98 EEIKVESDSDEQNQASDDVLSLD--EDDDDSDYNCGEDNDSDDYADEAAVEKDDNDADDE 155
Query: 172 IEGSVPEQIKIQ-NEFIE-----DHVQMINDDGNEGSAKLDD 207
+V + + ++ ++++E DH + +DD +E LDD
Sbjct: 156 DVDNVADDVPVEDDDYVEAFDSRDHAKADDDDEDE-RQYLDD 196
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 386 QHKKKHDDVTALHHC--ETCDVTYNSRKSLMAHKRN 419
+ ++ ++ A + C E C ++++S K LM HKRN
Sbjct: 1225 EEEENEEEECAAYQCNMEGCTMSFSSEKQLMLHKRN 1260
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 29.9 bits (64), Expect = 3.5
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 346 TYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDVTALHHCETCDV 405
+Y C+VCG+ + A+ H K P ++ + KK +H C C
Sbjct: 749 SYQCNVCGRELPSYQALGGHKASHRT-KPPVENATGEKMRP--KKLAPSGKIHKCSICHR 805
Query: 406 TYNSRKSLMAHKR 418
+++ +SL HKR
Sbjct: 806 EFSTGQSLGGHKR 818
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 347 YSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDVTA-LHHCETCDV 405
+ CS+C K +++ A+ H + + + + K + +H C+ C V
Sbjct: 193 FKCSICEKVFTSYQALGGHKASHSIKAAQLENAGADAGEKTRSKMLSPSGKIHKCDICHV 252
Query: 406 TYNSRKSLMAHKRNTF 421
+ + ++L HKR +
Sbjct: 253 LFPTGQALGGHKRRHY 268
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 29.5 bits (63), Expect = 4.6
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 226 EEQKAVLDAMRKGKKYLEAEFKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFA 285
EE++ + + R+ ++YL+ + + FL K+T +A MR +E + + EV L+ A
Sbjct: 378 EEERLLREKQREEERYLKEQMRELQRREKFLKKETIRAEKMRQKEEMRKEK-EVARLKAA 436
Query: 286 CASVLRAHSKTHSLE 300
+ S+E
Sbjct: 437 NERAIARKIAKESME 451
>At5g28970.1 68418.m03584 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 1172
Score = 29.5 bits (63), Expect = 4.6
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 136 YEDLDALNEFYGNDNPIVDKGANALNVLDDDNIDGEI--EGSVPEQIKIQNEFIEDHVQM 193
+E D+ + DNPI D GA N + D+ +G+I + S K Q+ E+++
Sbjct: 399 HESQDSYKDDATEDNPIYDTGAKDPNDNEPDD-EGKIQFDSSANVSNKKQSPLEENNIME 457
Query: 194 INDDGNEGS 202
+N + +E S
Sbjct: 458 VNLEADEAS 466
>At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 324
Score = 29.5 bits (63), Expect = 4.6
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 19/112 (16%)
Query: 331 KQHLKRF-HNQKNNNRTYSCSVCGKSYSNQGAVRTHMIKFN------CDKCPSTFSSPYT 383
+Q LKR K T+S GK G RTH + + C KC S F +
Sbjct: 203 RQPLKRHCRPTKKFENTFSDFDSGKDIEYDG--RTHSLPYEKYGPYTCPKCNSVFDTSQK 260
Query: 384 LNQHKKKHDDVTALHH----CETCDVTYNSRKSLMAHKRNTFAHQQTVYVHP 431
H ++++H+ E YN+R KRN H+++ + P
Sbjct: 261 FAAH------ISSMHYKNESIEEKFKRYNARNKKRLRKRNQMIHEESNNIQP 306
>At4g33740.2 68417.m04791 expressed protein
Length = 227
Score = 29.5 bits (63), Expect = 4.6
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 114 NRKDADDYHVHQLQDERNYIDYYEDLDALNEFY-GNDNPIVDKGANALNVLDDDNIDGEI 172
N+K+ ++ HV + +DE E+ + ++ GN V+K V +DD D
Sbjct: 80 NQKE-NEKHVEEDEDEEEISHGGEEKEKKSKVENGNHEEEVEKDEEE-EVAEDDEEDKNK 137
Query: 173 EGS-VPEQIKIQNEFIEDHVQMINDDGNEGSAKLDD 207
+G V E+ + +N+ ED + + N G DD
Sbjct: 138 QGEEVAEEDEEENKHEEDEIDEQDQSKNAGDTDKDD 173
>At4g33740.1 68417.m04790 expressed protein
Length = 227
Score = 29.5 bits (63), Expect = 4.6
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Query: 114 NRKDADDYHVHQLQDERNYIDYYEDLDALNEFY-GNDNPIVDKGANALNVLDDDNIDGEI 172
N+K+ ++ HV + +DE E+ + ++ GN V+K V +DD D
Sbjct: 80 NQKE-NEKHVEEDEDEEEISHGGEEKEKKSKVENGNHEEEVEKDEEE-EVAEDDEEDKNK 137
Query: 173 EGS-VPEQIKIQNEFIEDHVQMINDDGNEGSAKLDD 207
+G V E+ + +N+ ED + + N G DD
Sbjct: 138 QGEEVAEEDEEENKHEEDEIDEQDQSKNAGDTDKDD 173
>At3g23140.1 68416.m02916 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 29.5 bits (63), Expect = 4.6
Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 343 NNRTYSCSVCGKSYSNQGAVRTH--MIKFNCDKCPSTFSSPYT 383
N RTY C +C + ++N A+ H + + ++ PS+ SS ++
Sbjct: 17 NRRTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSHS 59
>At3g14900.1 68416.m01884 expressed protein
Length = 611
Score = 29.5 bits (63), Expect = 4.6
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 6/134 (4%)
Query: 108 ERNLDENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALNVLDDDN 167
E D +D D+ + ++ + ++ ED +A N+ +D+ D V DDDN
Sbjct: 407 ELGCDAPDEDEDEISISGSSEKAEFSEWIED-EADNDDDDDDDD--DDDGEVEEVDDDDN 463
Query: 168 IDGEIEGSVPEQIKIQNEFIEDHVQMINDDGNEGSAKLDDXXXXXXXXXXXXXILTD--L 225
+ ++EG+V E+ +++E E + E K + +++D
Sbjct: 464 MVVDVEGNV-EEDSLEDEIEESDPEEDERYWEEQFNKATNNAERMEKLAEMSMVVSDKFY 522
Query: 226 EEQKAVLDAMRKGK 239
E+Q L+ KG+
Sbjct: 523 EKQLKALEEREKGE 536
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 29.5 bits (63), Expect = 4.6
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 368 KFNCDKCPSTFSSPYTLNQHKKKHDDV 394
+F CD C F S L H+ H DV
Sbjct: 147 RFECDGCKKVFGSHQALGGHRATHKDV 173
>At1g29760.1 68414.m03639 expressed protein
Length = 526
Score = 29.5 bits (63), Expect = 4.6
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 20/103 (19%)
Query: 90 SDSCQTLQTGYSSQYVCDERNLDENRKDADDYHVHQLQDERNYIDYYE----DLDALNEF 145
S S G S YV E+N E R D D V ++ ++ ID DLD ++
Sbjct: 66 SSSSDGFDVGEKSSYV--EKNA-ELRGDIDTSDV--IESTKDSIDLSSEKENDLDVISSS 120
Query: 146 YGNDNPIVDKGANALN----------VLDDDNIDGEIEGSVPE 178
GND ++D G N ++ V DD D + GSVP+
Sbjct: 121 -GNDMDVIDSGRNRVDPFQEESTVTTVSSDDQGDDDYAGSVPQ 162
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 29.1 bits (62), Expect = 6.0
Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 11/142 (7%)
Query: 277 CEVCTLRFACASVLRAHSKTHSLERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKR 336
C++C F + LR H + H E R + + + QH R
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGY--SLKKHYYSCPQHGCR 276
Query: 337 FHNQKNNNRTYSCSVCGKSYSNQGAVRTHMIK-FNCDKCP-STFSSPYTLNQHKKKHDDV 394
++ + + +C K++ R+H K + C +C FS L H+K D+
Sbjct: 277 WNQRHEKFQPLKSVICAKNHYK----RSHCPKMYMCRRCSVKHFSVLSDLRTHEKHCGDI 332
Query: 395 TALHHCETCDVTYNSRKSLMAH 416
+ C +C ++ + LM+H
Sbjct: 333 KWV--C-SCGTKFSRKDKLMSH 351
>At4g22580.1 68417.m03258 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 435
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 132 YIDYYEDLDALNEFYGND-NPIVDKGANALNVLDDD 166
Y+ YY +D+L YG D N D G++ L L D
Sbjct: 121 YLPYYAGIDSLRYLYGPDLNSSADHGSDLLEFLTRD 156
>At3g46070.1 68416.m04985 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 170
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 10/81 (12%)
Query: 275 YRCEVCTLRFACASVLRAHSKTHS-LERS---------RRRVKVDANGTQVPCHLCGRIF 324
+RC+ C F L H +HS L S +++ K T C +CG F
Sbjct: 36 FRCKTCERDFDSFQALGGHRASHSKLTNSDDKSLPGSPKKKPKTTTTTTAHTCPICGLEF 95
Query: 325 MDTTNLKQHLKRFHNQKNNNR 345
L H+++ N+K +
Sbjct: 96 PMGQALGGHMRKHRNEKEREK 116
>At3g42100.1 68416.m04322 AT hook motif-containing protein-related
very low similarity to SP|Q9UUA2 DNA repair and
recombination protein pif1, mitochondrial precursor
{Schizosaccharomyces pombe}; weak hit to Pfam profile
PF02178: AT hook motif
Length = 1752
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/68 (29%), Positives = 27/68 (39%)
Query: 100 YSSQYVCDERNLDENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANA 159
YS Y+ D N +NR + + E ++AL E NP VDK A
Sbjct: 440 YSQLYIVDTENEVDNRATVINKGKGRRNTPAKQKLKKEVIEALIEMLNKVNPYVDKFRQA 499
Query: 160 LNVLDDDN 167
+ DDN
Sbjct: 500 RERIQDDN 507
>At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 548
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 347 YSCSVCGKSYSNQGAVRTHM-IKFNCDKCPSTFSSPYTLNQHKKKH 391
Y C+ C K S G VR + + D C FS LN+HK H
Sbjct: 51 YCCNYCDKDLS--GLVRFKCAVCMDFDLCVECFSVGVELNRHKNSH 94
>At2g36230.1 68415.m04447
N'-5'-phosphoribosyl-formimino-5-aminoimidazole-4-
carboxamide ribonucleotide isomerase identical to
N'-5'-phosphoribosyl-formimino-5-aminoimidazole-
4-carboxamide ribonucleotide isomerase GI:3449284 from
[Arabidopsis thaliana]; contains Pfam profile: PF00977
histidine biosynthesis protein
Length = 304
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 102 SQYVCDERNLDENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALN 161
S + DE++L+ +D++ VH + E + E+L AL GN +PI A +
Sbjct: 201 SDVILDEKSLEFLGGFSDEFLVHGVDVEGKKLGIDEELVAL---LGNYSPIPVTYAGGVT 257
Query: 162 VLDD 165
V+DD
Sbjct: 258 VMDD 261
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 11/66 (16%)
Query: 314 QVPCHLCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVRTHMI---KFN 370
+V C+ C R F D L QH K H + C VC K S + H++ K N
Sbjct: 11 KVWCYYCDREFDDEKILVQHQKAKH--------FKCHVCHKKLSTASGMVIHVLQVHKEN 62
Query: 371 CDKCPS 376
K P+
Sbjct: 63 VTKVPN 68
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 346 TYSCSVCGKSYSNQGAVRTHMI--KFNCDKCPSTFSSPYTLNQHKKKHDDVTA---LHHC 400
+Y CSVC K++S+ A+ H + N + S ++ + T H C
Sbjct: 79 SYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVC 138
Query: 401 ETCDVTYNSRKSLMAHKR 418
C+ ++ S ++L HKR
Sbjct: 139 TICNKSFPSGQALGGHKR 156
>At1g07480.2 68414.m00801 transcription factor IIA large subunit /
TFIIA large subunit (TFIIA-L) identical to transcription
factor IIA large subunit GI:2826884 from [Arabidopsis
thaliana]
Length = 375
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Query: 171 EIEGSVPEQIKIQNEFIEDHVQMINDDGNEGSAKLDD 207
EI+ S P + +QN+ IED +++N+D ++ +LDD
Sbjct: 289 EIQTSTP--VAVQNDIIEDDEELLNEDDDDD--ELDD 321
>At1g07480.1 68414.m00800 transcription factor IIA large subunit /
TFIIA large subunit (TFIIA-L) identical to transcription
factor IIA large subunit GI:2826884 from [Arabidopsis
thaliana]
Length = 375
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Query: 171 EIEGSVPEQIKIQNEFIEDHVQMINDDGNEGSAKLDD 207
EI+ S P + +QN+ IED +++N+D ++ +LDD
Sbjct: 289 EIQTSTP--VAVQNDIIEDDEELLNEDDDDD--ELDD 321
>At1g03280.1 68414.m00306 transcription initiation factor IIE
(TFIIE) alpha subunit family protein / general
transcription factor TFIIE family protein contains Pfam
profile: PF02002 TFIIE alpha subunit
Length = 479
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 319 LCGRIFMDTTNLKQHLKRFHNQKNNNRTYSCSVCGKSYSNQGAVR-THMI--KFNCDKC 374
+C + +K+ LK KN + Y C C + Y+ A+R M+ F+C+ C
Sbjct: 138 ICDVVRFRLHRMKKRLKDELEDKNTVQEYGCPNCQRKYNALDALRLISMVDDSFHCENC 196
>At5g06070.1 68418.m00673 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 226
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 345 RTYSCSVCGKSYSNQGAVRTHM 366
R+YSCS CG+ + + A+ HM
Sbjct: 53 RSYSCSFCGREFKSAQALGGHM 74
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 399 HCETCDVTYNSRKSLMAHKRNTFAHQ 424
+ E C +T+ S+ L HKRN H+
Sbjct: 1218 YLEGCKMTFESKAKLQTHKRNRCTHE 1243
>At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 164
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/74 (25%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Query: 345 RTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFSSPYTLNQHKKKHDDVTALHHCETCD 404
R + C C K +S+ A+ H K S P L K H C C
Sbjct: 35 RVFRCKTCLKEFSSFQALGGHRASH---KKLINSSDPSLLGSLSNKKTKTATSHPCPICG 91
Query: 405 VTYNSRKSLMAHKR 418
V + ++L H R
Sbjct: 92 VEFPMGQALGGHMR 105
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 28.7 bits (61), Expect = 8.0
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 341 KNNNRTYSCSVCGKSYSNQGAVRTHMIKFNCDKCPSTFS-------SPYTLNQHKKKHDD 393
++ N Y C+VC K++ + A+ H K P+ S +P +KH
Sbjct: 100 ESKNLPYKCNVCEKAFPSYQALGGHKASHRI-KPPTVISTTADDSTAPTISIVAGEKHPI 158
Query: 394 VTA--LHHCETCDVTYNSRKSLMAHKR 418
+ +H C C + + ++L HKR
Sbjct: 159 AASGKIHECSICHKVFPTGQALGGHKR 185
>At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ;
contains Pfam profile: PF00096 Zinc finger, C2H2 type
Length = 172
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 342 NNNRTYSCSVCGKSYSNQGAVRTHM 366
N +R+Y CS C + +SN A+ HM
Sbjct: 30 NQSRSYVCSFCIRGFSNAQALGGHM 54
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 28.7 bits (61), Expect = 8.0
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Query: 239 KKYLEAEFKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHS 298
++ + +C C F ++ HM S + RC VC +R H
Sbjct: 10 RRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPD 69
Query: 299 LERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFH 338
S+ K A T+ C LC +IF + L +H + H
Sbjct: 70 -HLSKGNCK--AIFTKRGCTLCLQIFEEAFALAEHKNKCH 106
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 28.7 bits (61), Expect = 8.0
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Query: 239 KKYLEAEFKCYNCAVGFLFKDTYQAHMMRHEESNGEYRCEVCTLRFACASVLRAHSKTHS 298
++ + +C C F ++ HM S + RC VC +R H
Sbjct: 10 RRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNVPD 69
Query: 299 LERSRRRVKVDANGTQVPCHLCGRIFMDTTNLKQHLKRFH 338
S+ K A T+ C LC +IF + L +H + H
Sbjct: 70 -HLSKGNCK--AIFTKRGCTLCLQIFEEAFALAEHKNKCH 106
>At1g52410.2 68414.m05915 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 759
Score = 28.7 bits (61), Expect = 8.0
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 110 NLDENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALNVLDDDNID 169
NLD +D D V+ LQ + + D + + N+ N+ + DK +L++ D+ +
Sbjct: 38 NLDLIERDYQD-SVNALQGKDDE-DQSAKIQSENQ---NNTTVTDKNTISLSLSDESEVG 92
Query: 170 GEIEGSVP-----EQIKIQNEFIEDHVQMINDDGNEGSAKLDD 207
+ SV +QIK++ E + + DG + +K DD
Sbjct: 93 SVSDESVGRSSLLDQIKLEFEAHHNSINQAGSDGVKAESKDDD 135
>At1g52410.1 68414.m05914 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 755
Score = 28.7 bits (61), Expect = 8.0
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 110 NLDENRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALNVLDDDNID 169
NLD +D D V+ LQ + + D + + N+ N+ + DK +L++ D+ +
Sbjct: 38 NLDLIERDYQD-SVNALQGKDDE-DQSAKIQSENQ---NNTTVTDKNTISLSLSDESEVG 92
Query: 170 GEIEGSVP-----EQIKIQNEFIEDHVQMINDDGNEGSAKLDD 207
+ SV +QIK++ E + + DG + +K DD
Sbjct: 93 SVSDESVGRSSLLDQIKLEFEAHHNSINQAGSDGVKAESKDDD 135
>At1g24260.1 68414.m03058 MADS-box protein (AGL9) strongly similar
to GB:O22456, MADS-box protein, Location of EST
gb|H37053
Length = 250
Score = 28.7 bits (61), Expect = 8.0
Identities = 25/138 (18%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 54 RSKCLKRSSEYPSLFSEDVPIRLQRTDTECHILCPKSDSCQTLQTGYSSQYVCDERNLDE 113
R+ LK++ E L +V + + + + C S +TL+ Y E N+
Sbjct: 25 RNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPS 84
Query: 114 NRKDADDYHVHQLQDERNYIDYYEDLDALNEFYGNDNPIVDKGANALNVLDDDNIDGEIE 173
A +L ++ Y+ E DAL N ++ + L+ + ++++ +++
Sbjct: 85 REALA------ELSSQQEYLKLKERYDALQRTQRN---LLGEDLGPLSTKELESLERQLD 135
Query: 174 GSVPEQIKIQNEFIEDHV 191
S+ + ++ +F+ D +
Sbjct: 136 SSLKQIRALRTQFMLDQL 153
>At1g13400.1 68414.m01562 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 240
Score = 28.7 bits (61), Expect = 8.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 274 EYRCEVCTLRFACASVLRAHSKTHSLER 301
EY C C+L+F + L H H ER
Sbjct: 82 EYECRFCSLKFFKSQALGGHMNRHRQER 109
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.134 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,822,408
Number of Sequences: 28952
Number of extensions: 490515
Number of successful extensions: 1736
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 1505
Number of HSP's gapped (non-prelim): 258
length of query: 433
length of database: 12,070,560
effective HSP length: 83
effective length of query: 350
effective length of database: 9,667,544
effective search space: 3383640400
effective search space used: 3383640400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -