GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001631-TA|BGIBMGA001631-PA|undefined
         (260 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    27   0.11 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.3  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 92  DITDIDFPNKYDRFGDEYIDLSDLARGR 119
           D  DID P+  + F D+Y+D    A+ R
Sbjct: 136 DTQDIDLPSFIESFPDKYVDSKVFAKAR 163


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 92  DITDIDFPNKYDRFGDEYIDLSDLARGR 119
           D  ++D P+    F D+Y+D    AR R
Sbjct: 136 DTQNLDLPSFIHVFPDKYVDSQVFARAR 163


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.141    0.435 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,530
Number of Sequences: 317
Number of extensions: 2286
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 2
length of query: 260
length of database: 114,650
effective HSP length: 56
effective length of query: 204
effective length of database: 96,898
effective search space: 19767192
effective search space used: 19767192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)