GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001631-TA|BGIBMGA001631-PA|undefined
         (260 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010127-1|AAQ22596.1|  550|Drosophila melanogaster AT03545p pro...    32   0.69 
AE014297-3311|AAF56123.1|  550|Drosophila melanogaster CG17083-P...    32   0.69 

>BT010127-1|AAQ22596.1|  550|Drosophila melanogaster AT03545p
           protein.
          Length = 550

 Score = 32.3 bits (70), Expect = 0.69
 Identities = 13/48 (27%), Positives = 27/48 (56%)

Query: 24  LQHQTGYPQTNLDVNKQRLRDLLKKTILNEIYNKLYKEVRRVPFYVID 71
           ++ + G+   N D+ +Q +R L  +T  N+ Y K+ +++     Y+ID
Sbjct: 157 VRQECGFTAANADLREQLIRILNHRTFFNDSYTKMVQKLNSEKKYLID 204


>AE014297-3311|AAF56123.1|  550|Drosophila melanogaster CG17083-PA
           protein.
          Length = 550

 Score = 32.3 bits (70), Expect = 0.69
 Identities = 13/48 (27%), Positives = 27/48 (56%)

Query: 24  LQHQTGYPQTNLDVNKQRLRDLLKKTILNEIYNKLYKEVRRVPFYVID 71
           ++ + G+   N D+ +Q +R L  +T  N+ Y K+ +++     Y+ID
Sbjct: 157 VRQECGFTAANADLREQLIRILNHRTFFNDSYTKMVQKLNSEKKYLID 204


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.141    0.435 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,156,952
Number of Sequences: 52641
Number of extensions: 454265
Number of successful extensions: 1026
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1022
Number of HSP's gapped (non-prelim): 4
length of query: 260
length of database: 24,830,863
effective HSP length: 83
effective length of query: 177
effective length of database: 20,461,660
effective search space: 3621713820
effective search space used: 3621713820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)