Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001629-TA|BGIBMGA001629-PA|IPR002018|Carboxylesterase,
type B
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce... 62 1e-10
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 45 2e-05
SPAC8F11.08c |||esterase/lipase|Schizosaccharomyces pombe|chr 1|... 32 0.17
SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces ... 29 1.2
SPBC16A3.11 |eso1||sister chromatid cohesion protein Eso1|Schizo... 29 1.6
SPBC947.09 |||ThiJ domain protein|Schizosaccharomyces pombe|chr ... 29 2.1
SPBC21B10.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 2.7
SPAC57A10.12c |ura3||dihydroorotate dehydrogenase Ura3|Schizosac... 28 2.7
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 2.7
SPBC146.12 |coq6||monooxygenase Coq6|Schizosaccharomyces pombe|c... 27 8.3
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 27 8.3
>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 520
Score = 62.5 bits (145), Expect = 1e-10
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 81 CLHLNIYVPNKATTKNLLPVMVWIHGGGFSIGSGNRADYSPELLIKHD-----VVLVFIN 135
CL LNI+VP PV+ +IHGG +G+ ++ D +LV
Sbjct: 82 CLFLNIWVPAGEKPAEGWPVLYFIHGGWLQVGNPLHYRQCDPQDLQADGSPAKFILVSPG 141
Query: 136 YRLGPYGFLC----LDSEKVPGNQGLKDQYLALKWVKENIRYFGGDPRMVTVFGESAGAV 191
+RL +GFL L+ + N G DQ L L+W ++I FGG+ + V G SAG+
Sbjct: 142 HRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAVGGISAGSY 201
Query: 192 SIEFFLL---SHREL--LFQRAIMQS-GSTLKPIAVSK 223
S F L+ H E + +RA++ S G +++P +V +
Sbjct: 202 SALFQLIYETYHPEANQIIKRALLLSNGLSVQPKSVEE 239
>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 45.2 bits (102), Expect = 2e-05
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 15/134 (11%)
Query: 57 PFEAYNDTTVCPQMSGQTPIGTLQCLHLNIYVPNKATTKNLLPVMVWIHGGGFSIGSGNR 116
P E+ D T+ P+ + P G I+ P+ + P +W HGGG+ +G+ N
Sbjct: 64 PVESTEDITI-PRKHTKAPSGVPS----RIFRPHGTAPEGGWPCFLWFHGGGWVLGNINT 118
Query: 117 AD-YSPELLIKHDVVLVFINYRLGPYGFLCLDSEKVPGNQGLKDQYLALKWVKENIRYFG 175
+ ++ + + V+V ++YRL P + P + D + AL + EN G
Sbjct: 119 ENSFATHMCEQAKCVVVNVDYRLAP---------EDPFPACIDDGWEALLYCYENADTLG 169
Query: 176 GDPRMVTVFGESAG 189
+P + V G SAG
Sbjct: 170 INPNKIAVGGSSAG 183
>SPAC8F11.08c |||esterase/lipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 376
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 150 KVPGNQGLKDQYLALKWVKENIRYFGGDPRMVTVFGESAGAVSIEFFLLSH 200
K P + ++ L + W+ EN Y+ DP + GE GA S+ L H
Sbjct: 230 KFPLSDAVEFVSLCVDWIVENAIYYDADPERIFFLGEDTGA-SVALESLKH 279
>SPAC637.04 |||Cargo-transport protein Ypp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 862
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/60 (26%), Positives = 31/60 (51%)
Query: 250 LSEKDSDLVIAATNEIENVYQIIRPCVDSGSDAVIPDLPQNLGNKKISGLNLMYGSNGEE 309
L++ ++ L A T E++N+ ++ P + ++IP LP + +S LN + N E
Sbjct: 45 LAKIEASLKSALTAELKNIANVLEPKLIDNQYSLIPALPSARTDPLLSQLNSLNIQNATE 104
>SPBC16A3.11 |eso1||sister chromatid cohesion protein
Eso1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 401 VMSKILNIAHSGATHGDELGYLFGNDALKDSPNEEDQLVIDRM 443
V KI +I G G+E+ L G D++KD N +ID++
Sbjct: 274 VSLKITDIRMLGGKFGEEIINLLGTDSIKDVWNMSMDFLIDKL 316
>SPBC947.09 |||ThiJ domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 261
Score = 28.7 bits (61), Expect = 2.1
Identities = 20/85 (23%), Positives = 35/85 (41%)
Query: 296 ISGLNLMYGSNGEEMLAYYNKYFIKGSFGKVLEMGFENLNESIAQIIQQFYVGDAEFNDN 355
++G + GS GEE L+Y + K + EN ++ +I+Q D D
Sbjct: 63 VAGPAIDKGSKGEEFLSYDDHIASGPELSKAEKYVLENKDDMFWRIVQNSKTADEVNPDK 122
Query: 356 IIPEFVQFGSDFFYNHPVERSMNKM 380
FV G ++ P ++ K+
Sbjct: 123 YDIFFVAGGHATLFDFPKATNLQKL 147
>SPBC21B10.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 159
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 354 DNIIPEFVQFGSDFFYNHPVERSMNKMIE--NGAKDIYYYVFNYSGHRNV 401
DNI EF + + F H + + IE +G+KDI+Y+ + S + V
Sbjct: 70 DNIPDEFEEIDAKTFDPHQKYKKVIHAIEQSSGSKDIHYFSYEESSTKTV 119
>SPAC57A10.12c |ura3||dihydroorotate dehydrogenase
Ura3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 443
Score = 28.3 bits (60), Expect = 2.7
Identities = 16/58 (27%), Positives = 27/58 (46%)
Query: 278 SGSDAVIPDLPQNLGNKKISGLNLMYGSNGEEMLAYYNKYFIKGSFGKVLEMGFENLN 335
S +D + +P++L K G+NL NG E+ Y G+F +L + + N
Sbjct: 212 SCTDPAVLGVPRSLIPNKFLGINLGKNKNGNEIEDYVEGVRTFGNFADILVINVSSPN 269
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 421 YLFGNDALKDSPNEEDQLVIDRMTKMWT 448
YL+G+ L SP D MT WT
Sbjct: 64 YLYGSPCLTSSPTSPDSCTFGNMTFQWT 91
>SPBC146.12 |coq6||monooxygenase Coq6|Schizosaccharomyces pombe|chr
2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 477 YMNIDSNLTLKTRPFHDRMAFWDLVYK 503
Y N S+LT TR F D++ WD K
Sbjct: 73 YSNRCSSLTNHTRMFFDKIGAWDFARK 99
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 26.6 bits (56), Expect = 8.3
Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 5/138 (3%)
Query: 360 FVQFGSDFFYNHPVERSMNKMIENGAKDIYYYVF--NYSGHRNVMSKILNIAHSGATHGD 417
F FG+ F H + R NK ++ + ++ ++ N N ++ + + G T
Sbjct: 40 FEPFGN-FSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSADNAIASLNGSSFQGNTLKV 98
Query: 418 ELGYLFGNDALKDSPNEEDQLVIDRMTKMWTDFAKFGNPTPEISDAIPDKWKSVSTKKYY 477
E ++ K N DQ+ K F+K T E + + S KK Y
Sbjct: 99 EYTHIVERYKNK-LENGVDQIHHSNNEKAKIRFSKIEKYTKETRPTVSEVRVSTKDKKEY 157
Query: 478 MNIDSNLTLKTRP-FHDR 494
SNL P HD+
Sbjct: 158 SMNTSNLVQSNPPKVHDK 175
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.138 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,610,749
Number of Sequences: 5004
Number of extensions: 120858
Number of successful extensions: 314
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 303
Number of HSP's gapped (non-prelim): 12
length of query: 516
length of database: 2,362,478
effective HSP length: 76
effective length of query: 440
effective length of database: 1,982,174
effective search space: 872156560
effective search space used: 872156560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
- SilkBase 1999-2023 -