Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001628-TA|BGIBMGA001628-PA|IPR011011|Zinc finger,
FYVE/PHD-type, IPR007087|Zinc finger, C2H2-type
(189 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 35 0.007
SPAC2F7.02c |||phosphoprotein phosphatase|Schizosaccharomyces po... 30 0.25
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 27 1.3
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 27 1.3
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 27 1.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 1.7
SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyce... 27 1.7
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 27 2.3
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 27 2.3
SPCC13B11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 3... 27 2.3
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 26 3.0
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 4.0
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 25 5.3
SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosac... 25 7.0
SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subuni... 25 7.0
SPCC16C4.01 |sif2|SPCC5E4.09|Sad1 interacting factor 2|Schizosac... 25 7.0
SPAC3A12.18 |zwf1|SPAC9.01|glucose-6-phosphate 1-dehydrogenase |... 25 7.0
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 25 7.0
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 25 9.3
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 25 9.3
SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyce... 25 9.3
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 25 9.3
SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|... 25 9.3
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 35.1 bits (77), Expect = 0.007
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 34 NKSVSKKY-AKKHELIHRPDNPLRCQHCPYIARNYRMLNSHQKKLHSNEKQRVIIACTLC 92
NK +++KY + H H D P RC C + L H ++H N + V C C
Sbjct: 451 NKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRH-LRIHENGRPYV---CE-C 505
Query: 93 GKKFDDMNVYFAHKKR 108
K+F+ ++ HK+R
Sbjct: 506 LKRFNRLDALNRHKQR 521
>SPAC2F7.02c |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 29.9 bits (64), Expect = 0.25
Identities = 18/64 (28%), Positives = 26/64 (40%)
Query: 9 FVDVATEYKNVYTPEEPVTETVAVQNKSVSKKYAKKHELIHRPDNPLRCQHCPYIARNYR 68
F D + + K YTP +PV + +V + + E +H P R P AR
Sbjct: 30 FQDASIDEKPTYTPAKPVKKAPSVVQPRRVSRTLRSSESVHTNHGPERVFESPTPARTSI 89
Query: 69 MLNS 72
L S
Sbjct: 90 SLES 93
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1207
Score = 27.5 bits (58), Expect = 1.3
Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 8/91 (8%)
Query: 3 QDGPIVFVDVATEYKNVYTPEEPVTETVAVQNKSVSKKYAKKHELIHRPDNPLRCQHCPY 62
Q G I F + T + +YT T++ + VS Y +++ + R Q P+
Sbjct: 935 QVGAINFSPLKTRFLEIYTASRVYLPTISGLDPLVS--YVRRNA-----ETAERSQALPF 987
Query: 63 IARNYRMLNSHQ-KKLHSNEKQRVIIACTLC 92
I RN + SH+ + + K I+ +C
Sbjct: 988 ITRNLASIKSHELHEAYRLVKANKILEAQIC 1018
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 27.5 bits (58), Expect = 1.3
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 8/91 (8%)
Query: 91 LCGKKFDDMNVYFAHKKRRKQCDECGLEVCHQAMNRHKHEKHGVKRKVRGKDVFTCKICE 150
+ G D + F + EC E+CH+ H K+K+R + F C IC+
Sbjct: 1163 IAGSDPSDFHYCFCRQPEAGMMIEC--ELCHEWY--HAKCMKMSKKKLRADEKFICPICD 1218
Query: 151 WSSVNKVKVLLHIIHHPEQDLSDCSFDLSVL 181
+ +V+V H P +L D+ L
Sbjct: 1219 Y----RVEVPRHSHRPPLIELQKMVDDIPTL 1245
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 27.1 bits (57), Expect = 1.7
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 12 VATEYKNVYTPEEPVTETVAVQNKSVSKKYAKKHELIHRPDNPLRCQHCPYIARNYRMLN 71
+++ Y++ Y+ V+ V +K+V+ + KH L H P +C P A LN
Sbjct: 80 ISSVYQS-YSSTFNVSNHVPSISKTVNIRETSKH-LKHSTKAP-KCS-LPTSALEIDHLN 135
Query: 72 SHQKKLHSNEKQRVIIACTLCGKKFDDMNVYFAHKKRRKQCDECGL 117
+ LHS+ K C + F D V KK + Q +E GL
Sbjct: 136 NF---LHSSAKILDRALCDQSNQLFTDYTVKKKSKKNKSQLEENGL 178
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 1.7
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 12 VATEYKNVYTPEEPVTETVAVQNKSVSKKYAKKHELIHRPDNPLRCQH 59
V T+ NV+ E VT T A +N+ S K ++ I PLR ++
Sbjct: 2066 VTTKTTNVHGDEMVVTTTSAYENEKFSSKTEWRNRAISSISLPLRTKN 2113
>SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 27.1 bits (57), Expect = 1.7
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 28 ETVAVQNKSVSKKYAK--KHELIHRPDNPLRCQHCPYIARNYRMLNSHQKKLHS 79
ET+ K V + AK LI + P++ + PYI R YR S +K S
Sbjct: 147 ETLMTDIKDVVEHAAKLGAQRLITLEELPVQWHNNPYIIRGYRFYTSKRKCFRS 200
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 26.6 bits (56), Expect = 2.3
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 57 CQHCPYIARNYRMLNSHQKKLHSNEKQRVIIACTLCGKKFDDMNVYFAHKK 107
C C + L H + LH++EK V I CGK+F + H++
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVCI----CGKRFSRRDNLRQHER 471
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 26.6 bits (56), Expect = 2.3
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 114 ECGLEVCHQAMNRHKHEKHGVKRKVRGKDVFTCKICEW 151
EC E+CH+ H K+K+R + FTC IC++
Sbjct: 1111 EC--EICHEWY--HAKCLKMSKKKLRQDEKFTCPICDY 1144
>SPCC13B11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 138
Score = 26.6 bits (56), Expect = 2.3
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 105 HKKRRKQCDECGLEVCHQAMNRHKHEKHGVKRKV 138
H +R+ C EC +++ ++ + +H H RK+
Sbjct: 14 HANQRRWCHECTIKIFRRSFDIARHTVHLCVRKI 47
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 39 KKYAKKHELIHRPDNPLRCQHCPYIARNYRMLNSHQKKLH 78
K++ ++HE H C C +LN H +++H
Sbjct: 40 KEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 25.8 bits (54), Expect = 4.0
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 39 KKYAKKHELIHRPDNPLRCQHCPYIARNYRMLNSHQKKLH 78
K++A++H H C HC +LN H + H
Sbjct: 31 KEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKH 70
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 25.4 bits (53), Expect = 5.3
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 45 HELIHRPDNPLRCQHCPY 62
H +++ P+ CQ+CPY
Sbjct: 1322 HGIVYNPEAYSSCQYCPY 1339
>SPAC16C9.02c |||S-methyl-5-thioadenosine
phosphorylase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 25.0 bits (52), Expect = 7.0
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 10 VDVATEYKNVYTPEEPVTETVAVQNKSVSKKYAKKH--ELIHRPDNPLRCQHCPYIARNY 67
V +AT+Y EEPVT +++ S +K AK E + + + PL ++ RN
Sbjct: 217 VCMATDYDCWRMNEEPVTVETVMEHISNNKDNAKIFLLEAVKKLEAPLL---QGFLGRNL 273
Query: 68 RMLNSHQKKLHSNEKQR 84
R S Q + +N K R
Sbjct: 274 R--ESVQNGIQTNHKHR 288
>SPCC297.06c ||SPCC737.01c|mitochondrial ribosomal protein subunit
8|Schizosaccharomyces pombe|chr 3|||Manual
Length = 230
Score = 25.0 bits (52), Expect = 7.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 14 TEYKNVYTPEEPVTETVAVQNKSVSKKYAKKH 45
TE + P+EP A+Q K K+ A KH
Sbjct: 116 TELLDEILPKEPAGSKEAMQQKKKEKRAALKH 147
>SPCC16C4.01 |sif2|SPCC5E4.09|Sad1 interacting factor
2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 7.0
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 73 HQKKLHSNEKQRVIIACTLCGKKFDDMNVYF-----AHKKRRKQCDEC 115
H K H RV CT + D + +F +HK R KQ DEC
Sbjct: 56 HLGKRHREFLPRVTAYCTCDTFRVDLLFKFFQSRRSSHKTRPKQFDEC 103
>SPAC3A12.18 |zwf1|SPAC9.01|glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 500
Score = 25.0 bits (52), Expect = 7.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 6 PIVFVDVATEYKNVYTPEEPVTETVAVQNKSVSKKYAKK 44
P VFV VAT K PE+ + V + V K A++
Sbjct: 128 PDVFVSVATNLKKKCVPEKGIARLVIEKPFGVDLKSAQE 166
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 25.0 bits (52), Expect = 7.0
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 44 KHELIHRPDNPLRCQHCPYIARNYRMLNSHQKKLHSNE 81
KH L +NP PY N R+ +S ++H N+
Sbjct: 55 KHHLSGN-ENPQPSSESPYFTNNERLNSSSFPQIHDNQ 91
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 24.6 bits (51), Expect = 9.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 13 ATEYKNVYTPEEPVTETVAVQNKSVSKKYAKKHELIH 49
A E +N+ + + V + + K VSK +K E +H
Sbjct: 572 AEENRNILSSKLKVLSDLKGEKKDVSKNIERKKETVH 608
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 24.6 bits (51), Expect = 9.3
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 27 TETVAVQNKSVSKKYAKKHELIHRPDNPLRCQHCPYIARNYRMLNSHQKK 76
T V QN+ + +K++ + ELI + P+ + + L S KK
Sbjct: 483 TLVVMTQNEKLKRKFSTEIELIKQHTKPMNTCQLEKVPMYVKALTSLMKK 532
>SPBC887.05c |cwf29||RNA-binding protein Cwf29|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 217
Score = 24.6 bits (51), Expect = 9.3
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 97 DDMNVYFAHKKRRKQCDECGLEVCHQAMNRHK--HEKHGVKRKVRGKD 142
D M Y +KRRK E NRH H +H R+ R D
Sbjct: 169 DPMRDYIHREKRRKLKHESSDRSDKSDSNRHSRHHRRHSRSRRHRDLD 216
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 24.6 bits (51), Expect = 9.3
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Query: 7 IVFVDVATEYKNVYTPEEPVT--ETVAVQNKSVSKKYAKKHELIHR 50
I DVAT + P T E+V SKK KKH H+
Sbjct: 463 IALPDVATPTADDQDPSTAATNEESVVSNEDRTSKKAGKKHHRHHK 508
>SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 24.6 bits (51), Expect = 9.3
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 FDDMNVYFA--HKKRRKQCDECG-LEVCHQAMNRHKHEKHGVKRKVRGKD 142
F D+N + + H R Q + G L++ H H++ GV+ +RG D
Sbjct: 377 FGDVNTHTSDMHIVRVNQTIDLGRLKLVHDIYKAVLHDRMGVEEAIRGLD 426
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.322 0.135 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 940,597
Number of Sequences: 5004
Number of extensions: 38907
Number of successful extensions: 119
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 107
Number of HSP's gapped (non-prelim): 25
length of query: 189
length of database: 2,362,478
effective HSP length: 69
effective length of query: 120
effective length of database: 2,017,202
effective search space: 242064240
effective search space used: 242064240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 51 (24.6 bits)
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