Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001628-TA|BGIBMGA001628-PA|IPR011011|Zinc finger,
FYVE/PHD-type, IPR007087|Zinc finger, C2H2-type
(189 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 45 1e-06
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 33 0.004
Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein. 24 3.4
Z18889-1|CAA79327.1| 274|Anopheles gambiae trypsin protein. 24 3.4
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 7.8
AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein. 23 7.8
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 45.2 bits (102), Expect = 1e-06
Identities = 33/145 (22%), Positives = 56/145 (38%), Gaps = 10/145 (6%)
Query: 36 SVSKKYAKKHELIHRPDNPLRCQHCPYIARNYRMLNSHQKKLHSNEKQRVIIACTLCGKK 95
SV K+H H + P +C HC Y + + L H ++H+ EK +C +C +
Sbjct: 221 SVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHM-RIHTGEKP---YSCDVCFAR 276
Query: 96 FDDMNVYFAHKK----RRKQCDECGLEVCHQAMNRHKHEKHGVKRKVRGKDVFTCKICEW 151
F N AHK K +C ++C R + V+ CK C+
Sbjct: 277 FTQSNSLKAHKMIHQVGNKPVFQC--KLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDS 334
Query: 152 SSVNKVKVLLHIIHHPEQDLSDCSF 176
+ ++ +H H + C +
Sbjct: 335 TFPDRYSYKMHAKTHEGEKCYRCEY 359
Score = 39.1 bits (87), Expect = 8e-05
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 11 DVATEYKNVYTPEEPVTETVAVQNKSVSKKYAKKHELIHRPDNPLRCQHCPYIARNYRML 70
D+ +N++T ++P+ + + + K H H + RC++CPY + + R L
Sbjct: 312 DLRIHVQNLHTADKPI-KCKRCDSTFPDRYSYKMHAKTHEGEKCYRCEYCPYASISMRHL 370
Query: 71 NSHQKKLHSNEKQRVIIACTLCGKKFDDMNVYFAH 105
SH LH+++K C C + F + H
Sbjct: 371 ESH-LLLHTDQKP---YKCDQCAQTFRQKQLLKRH 401
Score = 38.3 bits (85), Expect = 1e-04
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 44 KHELIHRPDNPLRCQHCPYIARNYRMLNSHQKKLHSNEKQRVI---IACTLCGKKFDDMN 100
+H IH + P C C L +H K +H + V + T CG+K D+
Sbjct: 257 RHMRIHTGEKPYSCDVCFARFTQSNSLKAH-KMIHQVGNKPVFQCKLCPTTCGRK-TDLR 314
Query: 101 VYFAHKKRRKQCDECGLEVCHQAM-NRHKHEKHGVKRKVRGKDVFTCKICEWSSVNKVKV 159
++ + + +C + C +R+ ++ H + G+ + C+ C ++S++ +
Sbjct: 315 IHVQNLHTADKPIKC--KRCDSTFPDRYSYKMHAKTHE--GEKCYRCEYCPYASISMRHL 370
Query: 160 LLHIIHHPEQDLSDCSFDLSVLKKCQIL 187
H++ H +Q C ++ Q+L
Sbjct: 371 ESHLLLHTDQKPYKCDQCAQTFRQKQLL 398
Score = 34.3 bits (75), Expect = 0.002
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 36 SVSKKYAKKHELIHRPDNPLRCQHCPYIARNYRMLNSHQKKLHS 79
S+S ++ + H L+H P +C C R ++L H H+
Sbjct: 364 SISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHN 407
Score = 29.9 bits (64), Expect = 0.051
Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 43 KKHELIHRPDNPLRCQHCPYIARNYRMLNSHQKKLHSNEKQRVIIACTLCGKKFDDMNVY 102
+ H H P RC+HC L H + H++E+ C + + +
Sbjct: 171 QNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRH 230
Query: 103 FAHKKRRK--QCDECGLEVCHQAMNRHKHEKHGVKRKVRGKDVFTCKIC 149
K QC C + + ++ K +H R G+ ++C +C
Sbjct: 231 IRTHTGEKPFQCPHC----TYASPDKFKLTRH--MRIHTGEKPYSCDVC 273
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 33.5 bits (73), Expect = 0.004
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 4/103 (3%)
Query: 8 VFVDVATEYKNVYTPEEPVTETVAV---QNKSVSKKYAKKHELIHRPDNPLRCQHCPYIA 64
+FV++ Y + T + P + VAV N+S + I +C C
Sbjct: 300 LFVELTNFYNHSCT-KAPAQDGVAVASSNNQSQPARTGGSAVTITSEGQRFQCNLCDMSY 358
Query: 65 RNYRMLNSHQKKLHSNEKQRVIIACTLCGKKFDDMNVYFAHKK 107
R H+ ++H + I CT+C K F Y H +
Sbjct: 359 RTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMR 401
>Z22930-7|CAA80512.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 23.8 bits (49), Expect = 3.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 163 IIHHPEQDLSDCSFDLSVLK 182
++ HP+ D S FD S+L+
Sbjct: 119 VVQHPKYDSSSIDFDYSLLE 138
>Z18889-1|CAA79327.1| 274|Anopheles gambiae trypsin protein.
Length = 274
Score = 23.8 bits (49), Expect = 3.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 163 IIHHPEQDLSDCSFDLSVLK 182
++ HP+ D S FD S+L+
Sbjct: 119 VVQHPKYDSSSIDFDYSLLE 138
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 22.6 bits (46), Expect = 7.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 2 SQDGPIVFVDVATEYKNVYTPEEPVTETVAVQNKSVSKKYAKKHEL 47
+Q P++ VD + N TP + VA+ S K AK+ L
Sbjct: 1078 NQRQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENL 1123
>AF457551-1|AAL68781.1| 406|Anopheles gambiae calreticulin protein.
Length = 406
Score = 22.6 bits (46), Expect = 7.8
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 74 QKKLHSNEKQRVIIACTLCGKKFDDMNVYFAHK 106
QK LH V+ +CG ++V F++K
Sbjct: 116 QKDLHGETPYLVMFGPDICGPGTKKVHVIFSYK 148
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.322 0.135 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,661
Number of Sequences: 2123
Number of extensions: 8667
Number of successful extensions: 26
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 10
length of query: 189
length of database: 516,269
effective HSP length: 60
effective length of query: 129
effective length of database: 388,889
effective search space: 50166681
effective search space used: 50166681
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 46 (22.6 bits)
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