GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001627-TA|BGIBMGA001627-PA|undefined
         (112 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   0.55 
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   0.55 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   1.3  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   1.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   2.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   3.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   3.9  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    20   5.2  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    19   9.0  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    19   9.0  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    19   9.0  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 0.55
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 11  RKCRAIKRERYAVKELARLKKMLGVKDEEKPAG 43
           RK   I  E     +L ++K ++ V+DE KP G
Sbjct: 150 RKEEYISFESKVFHKLKKMKYLVEVQDEVKPRG 182


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
          homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 0.55
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 63 SKKVLEDIEKDNEDVEMSSDDENVVVDSE 91
          SKK  ED E ++   +   DDEN+ VD +
Sbjct: 21 SKK--EDEEVEHRLSDRDDDDENITVDDD 47


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 85  NVVVDSEGGKKRVFNT 100
           N+ V S+G  K  FNT
Sbjct: 434 NIEVQSQGSSKNTFNT 449


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 5/35 (14%)

Query: 65  KVLEDIEKDNEDVEMSSD--DENVVVDSEGGKKRV 97
           K L+ ++K  ED +M+ D  DE V+V   GG  R+
Sbjct: 139 KTLKPVKKVLEDADMTKDQIDEIVLV---GGSTRI 170



 Score = 20.6 bits (41), Expect = 3.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query: 60  LKKSKKVLEDIEKDNEDVE 78
           LK  KKVLED +   + ++
Sbjct: 141 LKPVKKVLEDADMTKDQID 159


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 8/28 (28%), Positives = 19/28 (67%)

Query: 60   LKKSKKVLEDIEKDNEDVEMSSDDENVV 87
            +KK+KK LE+ +K  E+ +  +  ++++
Sbjct: 1066 VKKTKKELEEEKKQAEEAKRKAKQKSLL 1093


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 8/28 (28%), Positives = 19/28 (67%)

Query: 60   LKKSKKVLEDIEKDNEDVEMSSDDENVV 87
            +KK+KK LE+ +K  E+ +  +  ++++
Sbjct: 1066 VKKTKKELEEEKKQAEEAKRKAKQKSLL 1093


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 8/28 (28%), Positives = 19/28 (67%)

Query: 60   LKKSKKVLEDIEKDNEDVEMSSDDENVV 87
            +KK+KK LE+ +K  E+ +  +  ++++
Sbjct: 1066 VKKTKKELEEEKKQAEEAKRKAKQKSLL 1093


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 8/28 (28%), Positives = 19/28 (67%)

Query: 60   LKKSKKVLEDIEKDNEDVEMSSDDENVV 87
            +KK+KK LE+ +K  E+ +  +  ++++
Sbjct: 1066 VKKTKKELEEEKKQAEEAKRKAKQKSLL 1093


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 29  LKKMLGVKDEEKPAGSEVME 48
           LK+M  V DEE P  +++ E
Sbjct: 325 LKEMEAVLDEEPPTYAKLQE 344


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 29  LKKMLGVKDEEKPAGSEVME 48
           LK+M  V DEE P  +++ E
Sbjct: 325 LKEMEAVLDEEPPTYAKLQE 344


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 68  EDIEKDNEDVEMSSDDENVVVDSEGGK 94
           +D EKD ED    +D    +     GK
Sbjct: 168 DDREKDEEDKRDDTDMHGRIKSERNGK 194


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 83  DENVVVDSEGGKKRVFNTKTLKDQ 106
           D+   + S+GGK    + K L D+
Sbjct: 72  DDKDSITSDGGKNGKLSDKFLDDE 95


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 83  DENVVVDSEGGKKRVFNTKTLKDQ 106
           D+   + S+GGK    + K L D+
Sbjct: 20  DDKDSITSDGGKNGKLSDKFLDDE 43


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query: 83  DENVVVDSEGGKKRVFNTKTLKDQ 106
           D+   + S+GGK    + K L D+
Sbjct: 203 DDKDSITSDGGKNGKLSDKFLDDE 226


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.309    0.128    0.343 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,009
Number of Sequences: 317
Number of extensions: 891
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of query: 112
length of database: 114,650
effective HSP length: 49
effective length of query: 63
effective length of database: 99,117
effective search space:  6244371
effective search space used:  6244371
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (19.9 bits)
S2: 38 (19.4 bits)