SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001627-TA|BGIBMGA001627-PA|undefined
         (112 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces...    30   0.076
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb...    29   0.13 
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc...    29   0.17 
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb...    29   0.23 
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ...    29   0.23 
SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyc...    29   0.23 
SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2 |Sch...    28   0.40 
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po...    28   0.40 
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po...    27   0.70 
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S...    27   0.93 
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22...    26   1.2  
SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces...    26   1.2  
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi...    26   1.2  
SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy...    26   1.2  
SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi...    26   1.2  
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom...    26   1.6  
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos...    26   1.6  
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom...    26   1.6  
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom...    26   1.6  
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p...    26   1.6  
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha...    26   1.6  
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub...    25   2.2  
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po...    25   2.8  
SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyce...    25   2.8  
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    25   2.8  
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb...    25   2.8  
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera...    25   3.8  
SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz...    25   3.8  
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa...    25   3.8  
SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyc...    24   5.0  
SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyc...    24   5.0  
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac...    24   5.0  
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ...    24   5.0  
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|...    24   6.6  
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa...    24   6.6  
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF...    24   6.6  
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe...    24   6.6  
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy...    24   6.6  
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M...    24   6.6  
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb...    24   6.6  
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha...    24   6.6  
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar...    23   8.7  
SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces pombe...    23   8.7  
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr...    23   8.7  
SPBC337.10c |||anamorsin family protein|Schizosaccharomyces pomb...    23   8.7  
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc...    23   8.7  
SPBC16G5.12c |top3||DNA topoisomerase III|Schizosaccharomyces po...    23   8.7  
SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase E3|Schizosac...    23   8.7  

>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 324

 Score = 30.3 bits (65), Expect = 0.076
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 3   KSIRSRWKRKCRAIKRERYAVKELARLK--KMLGVKDEEKPAGSEVMESEQVIFLD 56
           K  R+R K +    K E   + E A L+  KM  +K+EEK   S+++E   ++ +D
Sbjct: 134 KKSRNRQKERLERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKILEEAGLVAVD 189


>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 775

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 11/23 (47%), Positives = 19/23 (82%)

Query: 24  KELARLKKMLGVKDEEKPAGSEV 46
           +E+A L+KMLG+K ++K A S++
Sbjct: 115 REIAHLEKMLGIKSKDKSAHSKI 137


>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 682

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 2/81 (2%)

Query: 22  AVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSS 81
           A KE+ RL ++           SE+ ++E+V    +   K  +  L D E ++E+V   +
Sbjct: 77  ATKEIDRLYELENEGSSSSSESSEITDNEEVASASSKSTKSEE--LTDEESEDEEVYDPA 134

Query: 82  DDENVVVDSEGGKKRVFNTKT 102
             E ++  SE   +    ++T
Sbjct: 135 RGEGIISTSESSDESDAESET 155


>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 394

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 64  KKVLEDI-EKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQY 110
           K VLED+ +KDNE     SD+E+ V D E      F+ K     N +Y
Sbjct: 160 KGVLEDVLKKDNELKFNDSDEEDEVDDEEIESFNSFSRKMQTISNSRY 207


>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
           type |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 782

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 41  PAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVD--SEGGKKRVF 98
           P G  V  S+++I L    +   +  ++ +  ++E + +SSDD+ ++ D   + G+K   
Sbjct: 51  PNGILVSVSDKLIKLLLSRIDTLQNCVKSVSPNHESLIVSSDDQKIIDDIYEKFGEKPAE 110

Query: 99  NTKTLKDQNGQYPV 112
           +T   KD+N   P+
Sbjct: 111 DT---KDENRSQPI 121


>SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 573

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)

Query: 7   SRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 66
           SR +R+ R  +  R A + L R +KM  + D     G  V +   +  +   D+  SK V
Sbjct: 481 SRAERRQRFRQSLRAAERILVRSQKMNSLDDMSY--GLLVFQVNLMAIMSM-DMGLSKDV 537

Query: 67  LEDIEKDNEDVEMSS 81
            ED+ +D ED++ SS
Sbjct: 538 AEDLLQDLEDIQSSS 552


>SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 437

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 66  VLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 107
           +LED E  N D E   DD++++      +   +N+K+LK++N
Sbjct: 6   MLEDDE--NYDFEFEDDDDDMIEPYVDVENCYYNSKSLKEEN 45


>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 670

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 5   IRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIF--LDAGDLKK 62
           ++   +R  + +   + A+ E+  LK  L    EE    +  +E   ++   L++  LK 
Sbjct: 452 VQEETQRLSQLLISSQPALTEVKHLKLCLSDSQEELLQLNAKLEKANIVIDELNSAKLKL 511

Query: 63  SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKD 105
           SK+V E+    ++  EM+   +  +   E        ++TLK+
Sbjct: 512 SKQVEEESSMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKE 554


>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1076

 Score = 27.1 bits (57), Expect = 0.70
 Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 1/98 (1%)

Query: 1   MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMES-EQVIFLDAGD 59
           +  S+R  + ++  ++ + RY+++ +A  +K   VK  E     + +E   + +     D
Sbjct: 823 LQNSVREDFDKQTSSLAQLRYSIQNVAHAQKESEVKYNELNEQVKTLEGYVETVLEKFND 882

Query: 60  LKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRV 97
           LK   KV E            + + NV V S+   K V
Sbjct: 883 LKIENKVPETAPDVVPSSYPPAAESNVSVSSDTSTKDV 920


>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
            Mok11|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2397

 Score = 26.6 bits (56), Expect = 0.93
 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 13/95 (13%)

Query: 2    AKSIRSRWKRKCRAIKR-ERYAVKE-LARLKKMLG--VKDEEKPAGSEVMESEQVIFLDA 57
            +KS+R+    K RAI   +R+ V E +++L   +   +K   K    E    E VI +D 
Sbjct: 1582 SKSVRT----KLRAISTIQRFPVSEWVSKLDTHVRNCIKFSHKQNLEEDFIHEPVIDVDE 1637

Query: 58   GDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEG 92
              +  SK    DI+ D ED+E+    +N  +DS G
Sbjct: 1638 FAISSSK----DIDAD-EDLEIIGSSDNKAIDSNG 1667


>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
            Snf22|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1680

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 1/28 (3%)

Query: 48   ESEQVIFLDAGDLKKS-KKVLEDIEKDN 74
            E   +++ DA  ++K+ K+V+ED+EK+N
Sbjct: 1600 EEHSIVYEDAKLMEKTLKEVIEDLEKNN 1627


>SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 879

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 68  EDIEKDNEDVEMSSD--DENVVVDSEGGKKRVFNTKTLKDQN 107
           ED   D+ D+E S +  D N+V+DS  G +RV  ++    Q+
Sbjct: 696 EDDNSDDMDIEESEEEMDTNMVIDS--GSRRVTRSQNATSQS 735


>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
          |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 451

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 48 ESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSS 81
          + E + +L   D+ K KK  E +EK N+D +  S
Sbjct: 54 QKEFLPYLTTEDVGKHKKTKESLEKSNDDSQKIS 87


>SPBC15C4.04c |||amino acid permease, unknown
          10|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 542

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 44 SEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVF 98
          S V  +EQ  F D  +   + K L+ +     D E+S+D++N ++  E G K VF
Sbjct: 5  SNVSVNEQGKFNDKEEGFSNLKSLKHVSHSETDFEVSNDEDNQLL--ELGYKPVF 57


>SPBC14C8.02 |tim44||TIM23 translocase complex subunit
           Tim44|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 427

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 9   WKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVME 48
           WK K   IK E   V+++  LKK    ++ E P  S + +
Sbjct: 211 WKNKVEQIKNESRLVRKIQELKK--SYQESEHPIVSSIRD 248


>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1016

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 20/94 (21%), Positives = 38/94 (40%)

Query: 14  RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 73
           R I+RER  +     +K++   +   +   S + ES++ I      L+K K     + K 
Sbjct: 13  RKIERERSVIHGALSMKRLTQNQTVHQQLHSNIEESKKSIIYLEERLEKLKLRKNGVRKS 72

Query: 74  NEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 107
           N +      ++N    +    K   +T +  D N
Sbjct: 73  NSEKPSVGIEKNPSFSTTKSAKSFSSTSSNIDSN 106


>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 297

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 29  LKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVV 88
           LK  +G+K+ E    S   +SE ++F  + D    K  L D+E + +    S     +V 
Sbjct: 215 LKSYIGLKNMEYRVRSSFNQSETIVFSGSED---GKVYLWDLENETQITSTSVVGTPIVT 271

Query: 89  D 89
           D
Sbjct: 272 D 272


>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
            pombe|chr 3|||Manual
          Length = 1690

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 73   DNEDVEMSSDDENVVVDSEGGKK 95
            + EDVEM S+D++   +SE G K
Sbjct: 1322 NEEDVEMRSEDQSDTSESEVGSK 1344


>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 259

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 15/69 (21%), Positives = 34/69 (49%)

Query: 23  VKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSD 82
           VK +   ++   V++  K   S+   S   + LD  DLK    V+E + K+  D+++  +
Sbjct: 32  VKLILAARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLIN 91

Query: 83  DENVVVDSE 91
           +  + + ++
Sbjct: 92  NAGLALGTD 100


>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 352

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 14/52 (26%), Positives = 22/52 (42%)

Query: 58  GDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQ 109
           GDLKK  +V +  E    D+  S   E +   S   K R++  +      G+
Sbjct: 17  GDLKKDVEVAQPPEDSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQSIGK 68


>SPCC364.06 |nap1||nucleosome assembly protein Nap1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 393

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 2/23 (8%)

Query: 69  DIEKDNEDVEMSSDDENVVVDSE 91
           D+E+D +DVE SS++E  V DS+
Sbjct: 351 DVEEDEDDVESSSNEE--VSDSD 371


>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
           subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 544

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)

Query: 68  EDIEKDNEDVEMS----SDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 112
           ED+E ++E+V+ S     D +N  VD E   K   N       +G   V
Sbjct: 357 EDLESEDEEVDNSDDIVEDGDNAFVDDEDDDKDSVNASNTHRSSGPLEV 405


>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
          pombe|chr 1|||Manual
          Length = 433

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 32 MLGVKDEEKPAG-SEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSS 81
          ++ +  E  P+  S   +  +++  +  DLK  K  LE +EK   D E+SS
Sbjct: 30 IIAIDAEPVPSSMSAANDINKIVRPEYADLKYMKLALEAMEKWRNDPELSS 80


>SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 218

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 14  RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 73
           RA ++E+    E+A  + +LG++ E     +E+ME + V+     +L+ S + ++  EKD
Sbjct: 102 RARRKEKNRRDEVA--EAILGLQHEIVRI-NEIMEKQFVLQKKKNELQSSTEEIDSTEKD 158

Query: 74  NEDV 77
            +++
Sbjct: 159 FDEL 162


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 36  KDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMS--SDDENVVVDSEG 92
           K+EE+P  SE  +++   + D  D  ++   L  +   ++ ++++  S+D +  + +EG
Sbjct: 503 KEEERPLPSEPSQNQPAEYRDTPDTPRNIMPLPGLMSADQPIKVTEPSNDADKAIVAEG 561


>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 779

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%)

Query: 61  KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 107
           K  +KVL+ ++ + E+ +++S  + V+VDS+  ++   N   +KD N
Sbjct: 63  KVVEKVLDTLKAEVEE-KLASSQDLVLVDSDMEEQSDSNLMEVKDTN 108


>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
           isomerase|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 361

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 59  DLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQ 109
           DL ++    E+ E+++E  + S+ +E+ + DS   KK     K  KD++ Q
Sbjct: 145 DLVETVSGDEESEEESESEDNSASEEDEL-DSAPAKKAQVKKKRTKDESEQ 194


>SPCC1919.03c |||AMP-activated protein kinase beta subunit
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 298

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 7   SRWKRKCRAIKRERYAV 23
           SRWK+K + +K E Y V
Sbjct: 119 SRWKKKIQLLKSEDYTV 135


>SPAC23C4.19 |spt5||transcription elongation factor
           Spt5|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 990

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 10/41 (24%), Positives = 25/41 (60%)

Query: 56  DAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKR 96
           D  +++++++  +  E++ ED E   +DE    +S GG+++
Sbjct: 96  DEDNVEENEEEADANEEEEEDEEDDEEDEEDEDESGGGRRK 136


>SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 493

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 53  IFLDAGDLKKSKKVLEDIEKDNEDVEMSSD 82
           IF + GDLKK   + +D+    + V+  S+
Sbjct: 166 IFSETGDLKKGIAIFQDLSDAEQAVQYLSN 195


>SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 536

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)

Query: 60  LKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 101
           L K KK+L+ +EKD++  E +  +E+ +  S+      F  K
Sbjct: 281 LGKLKKILKMLEKDSKKDEKTKFEESDICISQCSSMGSFGPK 322


>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
           Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 815

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 68  EDIEKDNEDVEMSSDDENVVVDSEGGKKRV 97
           EDI+++NE  E  +DD  VV+D +    +V
Sbjct: 724 EDIKRENETGEAPADD--VVMDEDASVSQV 751


>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 598

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 36  KDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIE----KDNEDVEMSS-DDENVVVDS 90
           K++ K    E     +   L++   K+++KVLED+     K    V +++ DDEN +  S
Sbjct: 235 KEKTKKQLEEEEHGYERFLLESAQSKEARKVLEDLSSSYVKQRPSVLVNTEDDENGIKPS 294

Query: 91  E 91
           +
Sbjct: 295 D 295


>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1402

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 8   RWKRKCRAIKRERYAVKE-LARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKS 63
           R+K++  A+ R   A +E   R K++      E  AGSE   S   IF ++ + K+S
Sbjct: 193 RFKKRISALFRVFLAKQEEKKRAKRLNDAVPLEDMAGSESRPSYDSIFRESFEAKRS 249


>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
          Brl2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 680

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)

Query: 56 DAGDLKKSKKVLEDIEKDNEDV-EMSSDD 83
          DA  +   K+ LED+E  ++D+ E+S +D
Sbjct: 8  DAPTILGQKRELEDVEIQDDDIQEVSKED 36


>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
          eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 918

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 14/55 (25%), Positives = 25/55 (45%)

Query: 37 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSE 91
          +EE  + SE   SE+    +  +++  KK      +D+E    SS++E      E
Sbjct: 44 EEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEE 98


>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 456

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 7/31 (22%), Positives = 21/31 (67%)

Query: 47  MESEQVIFLDAGDLKKSKKVLEDIEKDNEDV 77
           +E+E+ + +  G++ K K++++D+   + D+
Sbjct: 216 LEAEEYVPMPKGEVHKRKEIVQDVTLHDLDI 246


>SPCC364.02c |bis1||stress response protein
          Bis1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 384

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 37 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNED 76
          D  K     V+ESE+V   DA +  + +K+   I K++ED
Sbjct: 50 DLPKLKAEVVLESEEVGSFDAQNESRDEKLKYLIAKNSED 89


>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 500

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 14/60 (23%), Positives = 25/60 (41%)

Query: 36  KDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKK 95
           K ++K   S   ESE           +S+    + E  + +   S  +E V+V +E  K+
Sbjct: 76  KSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKE 135


>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 231

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 54  FLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKD 105
           F D  + KK  K  E  E+D  ++E + +D+    D+ G   ++ + K  K+
Sbjct: 104 FTDKKEKKKIAKRKEKRERDWNEIEENFEDKTWEADTTGQFIQIESRKKRKN 155


>SPCC1235.05c |fft2||fun thirty related protein
            Fft2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1284

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 43   GSEVMESEQVIFLDAGDLK---KSKKVLEDIEKDNEDVEMSSDDENVVVDS 90
            GS+    E+    D GD K   K++   E +E DN+++  +   ENV  DS
Sbjct: 1136 GSQPNSVEKTDLAD-GDEKANIKTEMKSETVEGDNKELRETMKGENVQTDS 1185


>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
            subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1689

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 60   LKKSKKVLEDIEKDNEDVEMSSDDENV 86
            LK S KV ED+  D E+ E    DE+V
Sbjct: 1417 LKGSNKV-EDVNMDEEEDEGFKSDESV 1442


>SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces
          pombe|chr 1|||Manual
          Length = 564

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 67 LEDIEKDNEDVEMSSDDENVVVDSEGGK 94
          LE         E +SD+EN   D EGG+
Sbjct: 25 LEPASSRRRLAEENSDEENEEFDEEGGR 52


>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
            3|||Manual
          Length = 1516

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/44 (22%), Positives = 25/44 (56%)

Query: 59   DLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKT 102
            +L++++ ++ D  +D E  E+  + EN ++  E   ++V +  T
Sbjct: 973  ELEQTRVLISDQSQDGELKELLEEKENALIMMEEEMRQVNDANT 1016


>SPBC337.10c |||anamorsin family protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 288

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 58  GDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSE 91
           G      K+L+ ++ D E++ +S DD+  ++D +
Sbjct: 136 GQSASKNKILDFLKSDKENL-ISGDDDQELIDED 168


>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
           homolog|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 997

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 38  EEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSE 91
           E+K    EV++S+ ++     D  +  KV ED  +    V    D EN  ++SE
Sbjct: 536 EKKRKFQEVLQSKNILVSSTEDSHEPVKVTED-SQTAIHVSKFEDLENKSMESE 588


>SPBC16G5.12c |top3||DNA topoisomerase III|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 622

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 32  MLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNE 75
           +L + D    + S + E E +  +DA  +     + E IEK  E
Sbjct: 476 ILDMMDSSTSSPSYITEPELIALMDANGIGTDATMAEHIEKVQE 519


>SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase
           E3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 905

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/37 (29%), Positives = 23/37 (62%)

Query: 37  DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 73
           D E  + S+V E+++  FL+   L+ ++ V+E ++ D
Sbjct: 480 DTELTSMSDVFEAKESKFLEKKILRLARDVIERLDLD 516


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.309    0.128    0.343 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,874
Number of Sequences: 5004
Number of extensions: 21947
Number of successful extensions: 136
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 103
Number of HSP's gapped (non-prelim): 52
length of query: 112
length of database: 2,362,478
effective HSP length: 64
effective length of query: 48
effective length of database: 2,042,222
effective search space: 98026656
effective search space used: 98026656
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 48 (23.4 bits)

- SilkBase 1999-2023 -