BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001627-TA|BGIBMGA001627-PA|undefined (112 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 30 0.076 SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 29 0.13 SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 0.17 SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.23 SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 29 0.23 SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyc... 29 0.23 SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2 |Sch... 28 0.40 SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 28 0.40 SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 27 0.70 SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 0.93 SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 1.2 SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces... 26 1.2 SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 26 1.2 SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomy... 26 1.2 SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi... 26 1.2 SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 26 1.6 SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 26 1.6 SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 26 1.6 SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 26 1.6 SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 26 1.6 SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 26 1.6 SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 25 2.2 SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po... 25 2.8 SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyce... 25 2.8 SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 2.8 SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 25 2.8 SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 25 3.8 SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz... 25 3.8 SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 25 3.8 SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyc... 24 5.0 SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyc... 24 5.0 SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 24 5.0 SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 24 5.0 SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 24 6.6 SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 24 6.6 SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 24 6.6 SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 24 6.6 SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 24 6.6 SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 24 6.6 SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 24 6.6 SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 24 6.6 SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 23 8.7 SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces pombe... 23 8.7 SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 23 8.7 SPBC337.10c |||anamorsin family protein|Schizosaccharomyces pomb... 23 8.7 SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 23 8.7 SPBC16G5.12c |top3||DNA topoisomerase III|Schizosaccharomyces po... 23 8.7 SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase E3|Schizosac... 23 8.7 >SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces pombe|chr 1|||Manual Length = 324 Score = 30.3 bits (65), Expect = 0.076 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%) Query: 3 KSIRSRWKRKCRAIKRERYAVKELARLK--KMLGVKDEEKPAGSEVMESEQVIFLD 56 K R+R K + K E + E A L+ KM +K+EEK S+++E ++ +D Sbjct: 134 KKSRNRQKERLERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKILEEAGLVAVD 189 >SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 775 Score = 29.5 bits (63), Expect = 0.13 Identities = 11/23 (47%), Positives = 19/23 (82%) Query: 24 KELARLKKMLGVKDEEKPAGSEV 46 +E+A L+KMLG+K ++K A S++ Sbjct: 115 REIAHLEKMLGIKSKDKSAHSKI 137 >SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 682 Score = 29.1 bits (62), Expect = 0.17 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 2/81 (2%) Query: 22 AVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSS 81 A KE+ RL ++ SE+ ++E+V + K + L D E ++E+V + Sbjct: 77 ATKEIDRLYELENEGSSSSSESSEITDNEEVASASSKSTKSEE--LTDEESEDEEVYDPA 134 Query: 82 DDENVVVDSEGGKKRVFNTKT 102 E ++ SE + ++T Sbjct: 135 RGEGIISTSESSDESDAESET 155 >SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 394 Score = 28.7 bits (61), Expect = 0.23 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 64 KKVLEDI-EKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQY 110 K VLED+ +KDNE SD+E+ V D E F+ K N +Y Sbjct: 160 KGVLEDVLKKDNELKFNDSDEEDEVDDEEIESFNSFSRKMQTISNSRY 207 >SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster type |Schizosaccharomyces pombe|chr 1|||Manual Length = 782 Score = 28.7 bits (61), Expect = 0.23 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 5/74 (6%) Query: 41 PAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVD--SEGGKKRVF 98 P G V S+++I L + + ++ + ++E + +SSDD+ ++ D + G+K Sbjct: 51 PNGILVSVSDKLIKLLLSRIDTLQNCVKSVSPNHESLIVSSDDQKIIDDIYEKFGEKPAE 110 Query: 99 NTKTLKDQNGQYPV 112 +T KD+N P+ Sbjct: 111 DT---KDENRSQPI 121 >SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 573 Score = 28.7 bits (61), Expect = 0.23 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%) Query: 7 SRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 66 SR +R+ R + R A + L R +KM + D G V + + + D+ SK V Sbjct: 481 SRAERRQRFRQSLRAAERILVRSQKMNSLDDMSY--GLLVFQVNLMAIMSM-DMGLSKDV 537 Query: 67 LEDIEKDNEDVEMSS 81 ED+ +D ED++ SS Sbjct: 538 AEDLLQDLEDIQSSS 552 >SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 437 Score = 27.9 bits (59), Expect = 0.40 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Query: 66 VLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 107 +LED E N D E DD++++ + +N+K+LK++N Sbjct: 6 MLEDDE--NYDFEFEDDDDDMIEPYVDVENCYYNSKSLKEEN 45 >SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces pombe|chr 1|||Manual Length = 670 Score = 27.9 bits (59), Expect = 0.40 Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 2/103 (1%) Query: 5 IRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIF--LDAGDLKK 62 ++ +R + + + A+ E+ LK L EE + +E ++ L++ LK Sbjct: 452 VQEETQRLSQLLISSQPALTEVKHLKLCLSDSQEELLQLNAKLEKANIVIDELNSAKLKL 511 Query: 63 SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKD 105 SK+V E+ ++ EM+ + + E ++TLK+ Sbjct: 512 SKQVEEESSMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKE 554 >SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 1076 Score = 27.1 bits (57), Expect = 0.70 Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 1/98 (1%) Query: 1 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMES-EQVIFLDAGD 59 + S+R + ++ ++ + RY+++ +A +K VK E + +E + + D Sbjct: 823 LQNSVREDFDKQTSSLAQLRYSIQNVAHAQKESEVKYNELNEQVKTLEGYVETVLEKFND 882 Query: 60 LKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRV 97 LK KV E + + NV V S+ K V Sbjct: 883 LKIENKVPETAPDVVPSSYPPAAESNVSVSSDTSTKDV 920 >SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|Schizosaccharomyces pombe|chr 1|||Manual Length = 2397 Score = 26.6 bits (56), Expect = 0.93 Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 13/95 (13%) Query: 2 AKSIRSRWKRKCRAIKR-ERYAVKE-LARLKKMLG--VKDEEKPAGSEVMESEQVIFLDA 57 +KS+R+ K RAI +R+ V E +++L + +K K E E VI +D Sbjct: 1582 SKSVRT----KLRAISTIQRFPVSEWVSKLDTHVRNCIKFSHKQNLEEDFIHEPVIDVDE 1637 Query: 58 GDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEG 92 + SK DI+ D ED+E+ +N +DS G Sbjct: 1638 FAISSSK----DIDAD-EDLEIIGSSDNKAIDSNG 1667 >SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22|Schizosaccharomyces pombe|chr 3|||Manual Length = 1680 Score = 26.2 bits (55), Expect = 1.2 Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Query: 48 ESEQVIFLDAGDLKKS-KKVLEDIEKDN 74 E +++ DA ++K+ K+V+ED+EK+N Sbjct: 1600 EEHSIVYEDAKLMEKTLKEVIEDLEKNN 1627 >SPCC1682.02c |mcm3||MCM complex subunit Mcm3|Schizosaccharomyces pombe|chr 3|||Manual Length = 879 Score = 26.2 bits (55), Expect = 1.2 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%) Query: 68 EDIEKDNEDVEMSSD--DENVVVDSEGGKKRVFNTKTLKDQN 107 ED D+ D+E S + D N+V+DS G +RV ++ Q+ Sbjct: 696 EDDNSDDMDIEESEEEMDTNMVIDS--GSRRVTRSQNATSQS 735 >SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schizosaccharomyces pombe|chr 2|||Manual Length = 451 Score = 26.2 bits (55), Expect = 1.2 Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 48 ESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSS 81 + E + +L D+ K KK E +EK N+D + S Sbjct: 54 QKEFLPYLTTEDVGKHKKTKESLEKSNDDSQKIS 87 >SPBC15C4.04c |||amino acid permease, unknown 10|Schizosaccharomyces pombe|chr 2|||Manual Length = 542 Score = 26.2 bits (55), Expect = 1.2 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 44 SEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVF 98 S V +EQ F D + + K L+ + D E+S+D++N ++ E G K VF Sbjct: 5 SNVSVNEQGKFNDKEEGFSNLKSLKHVSHSETDFEVSNDEDNQLL--ELGYKPVF 57 >SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schizosaccharomyces pombe|chr 2|||Manual Length = 427 Score = 26.2 bits (55), Expect = 1.2 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 9 WKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVME 48 WK K IK E V+++ LKK ++ E P S + + Sbjct: 211 WKNKVEQIKNESRLVRKIQELKK--SYQESEHPIVSSIRD 248 >SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharomyces pombe|chr 2|||Manual Length = 1016 Score = 25.8 bits (54), Expect = 1.6 Identities = 20/94 (21%), Positives = 38/94 (40%) Query: 14 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 73 R I+RER + +K++ + + S + ES++ I L+K K + K Sbjct: 13 RKIERERSVIHGALSMKRLTQNQTVHQQLHSNIEESKKSIIYLEERLEKLKLRKNGVRKS 72 Query: 74 NEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 107 N + ++N + K +T + D N Sbjct: 73 NSEKPSVGIEKNPSFSTTKSAKSFSSTSSNIDSN 106 >SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 297 Score = 25.8 bits (54), Expect = 1.6 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Query: 29 LKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVV 88 LK +G+K+ E S +SE ++F + D K L D+E + + S +V Sbjct: 215 LKSYIGLKNMEYRVRSSFNQSETIVFSGSED---GKVYLWDLENETQITSTSVVGTPIVT 271 Query: 89 D 89 D Sbjct: 272 D 272 >SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces pombe|chr 3|||Manual Length = 1690 Score = 25.8 bits (54), Expect = 1.6 Identities = 11/23 (47%), Positives = 16/23 (69%) Query: 73 DNEDVEMSSDDENVVVDSEGGKK 95 + EDVEM S+D++ +SE G K Sbjct: 1322 NEEDVEMRSEDQSDTSESEVGSK 1344 >SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pombe|chr 1|||Manual Length = 259 Score = 25.8 bits (54), Expect = 1.6 Identities = 15/69 (21%), Positives = 34/69 (49%) Query: 23 VKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSD 82 VK + ++ V++ K S+ S + LD DLK V+E + K+ D+++ + Sbjct: 32 VKLILAARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLPKEFADIDVLIN 91 Query: 83 DENVVVDSE 91 + + + ++ Sbjct: 92 NAGLALGTD 100 >SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces pombe|chr 2|||Manual Length = 352 Score = 25.8 bits (54), Expect = 1.6 Identities = 14/52 (26%), Positives = 22/52 (42%) Query: 58 GDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQ 109 GDLKK +V + E D+ S E + S K R++ + G+ Sbjct: 17 GDLKKDVEVAQPPEDSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQSIGK 68 >SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 393 Score = 25.8 bits (54), Expect = 1.6 Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 2/23 (8%) Query: 69 DIEKDNEDVEMSSDDENVVVDSE 91 D+E+D +DVE SS++E V DS+ Sbjct: 351 DVEEDEDDVESSSNEE--VSDSD 371 >SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual Length = 544 Score = 25.4 bits (53), Expect = 2.2 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Query: 68 EDIEKDNEDVEMS----SDDENVVVDSEGGKKRVFNTKTLKDQNGQYPV 112 ED+E ++E+V+ S D +N VD E K N +G V Sbjct: 357 EDLESEDEEVDNSDDIVEDGDNAFVDDEDDDKDSVNASNTHRSSGPLEV 405 >SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces pombe|chr 1|||Manual Length = 433 Score = 25.0 bits (52), Expect = 2.8 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Query: 32 MLGVKDEEKPAG-SEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSS 81 ++ + E P+ S + +++ + DLK K LE +EK D E+SS Sbjct: 30 IIAIDAEPVPSSMSAANDINKIVRPEYADLKYMKLALEAMEKWRNDPELSS 80 >SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 218 Score = 25.0 bits (52), Expect = 2.8 Identities = 17/64 (26%), Positives = 37/64 (57%), Gaps = 3/64 (4%) Query: 14 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 73 RA ++E+ E+A + +LG++ E +E+ME + V+ +L+ S + ++ EKD Sbjct: 102 RARRKEKNRRDEVA--EAILGLQHEIVRI-NEIMEKQFVLQKKKNELQSSTEEIDSTEKD 158 Query: 74 NEDV 77 +++ Sbjct: 159 FDEL 162 >SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 1611 Score = 25.0 bits (52), Expect = 2.8 Identities = 13/59 (22%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Query: 36 KDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMS--SDDENVVVDSEG 92 K+EE+P SE +++ + D D ++ L + ++ ++++ S+D + + +EG Sbjct: 503 KEEERPLPSEPSQNQPAEYRDTPDTPRNIMPLPGLMSADQPIKVTEPSNDADKAIVAEG 561 >SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pombe|chr 2|||Manual Length = 779 Score = 25.0 bits (52), Expect = 2.8 Identities = 14/47 (29%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Query: 61 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 107 K +KVL+ ++ + E+ +++S + V+VDS+ ++ N +KD N Sbjct: 63 KVVEKVLDTLKAEVEE-KLASSQDLVLVDSDMEEQSDSNLMEVKDTN 108 >SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomerase|Schizosaccharomyces pombe|chr 2|||Manual Length = 361 Score = 24.6 bits (51), Expect = 3.8 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Query: 59 DLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQ 109 DL ++ E+ E+++E + S+ +E+ + DS KK K KD++ Q Sbjct: 145 DLVETVSGDEESEEESESEDNSASEEDEL-DSAPAKKAQVKKKRTKDESEQ 194 >SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 298 Score = 24.6 bits (51), Expect = 3.8 Identities = 9/17 (52%), Positives = 12/17 (70%) Query: 7 SRWKRKCRAIKRERYAV 23 SRWK+K + +K E Y V Sbjct: 119 SRWKKKIQLLKSEDYTV 135 >SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosaccharomyces pombe|chr 1|||Manual Length = 990 Score = 24.6 bits (51), Expect = 3.8 Identities = 10/41 (24%), Positives = 25/41 (60%) Query: 56 DAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKR 96 D +++++++ + E++ ED E +DE +S GG+++ Sbjct: 96 DEDNVEENEEEADANEEEEEDEEDDEEDEEDEDESGGGRRK 136 >SPBC11C11.01 ||SPBC17D1.08|RNA-binding protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 493 Score = 24.2 bits (50), Expect = 5.0 Identities = 10/30 (33%), Positives = 17/30 (56%) Query: 53 IFLDAGDLKKSKKVLEDIEKDNEDVEMSSD 82 IF + GDLKK + +D+ + V+ S+ Sbjct: 166 IFSETGDLKKGIAIFQDLSDAEQAVQYLSN 195 >SPCP31B10.05 |||tyrosyl-DNA phosphodiesterase |Schizosaccharomyces pombe|chr 3|||Manual Length = 536 Score = 24.2 bits (50), Expect = 5.0 Identities = 13/42 (30%), Positives = 23/42 (54%) Query: 60 LKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 101 L K KK+L+ +EKD++ E + +E+ + S+ F K Sbjct: 281 LGKLKKILKMLEKDSKKDEKTKFEESDICISQCSSMGSFGPK 322 >SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosaccharomyces pombe|chr 1|||Manual Length = 815 Score = 24.2 bits (50), Expect = 5.0 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%) Query: 68 EDIEKDNEDVEMSSDDENVVVDSEGGKKRV 97 EDI+++NE E +DD VV+D + +V Sbjct: 724 EDIKRENETGEAPADD--VVMDEDASVSQV 751 >SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 598 Score = 24.2 bits (50), Expect = 5.0 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 5/61 (8%) Query: 36 KDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIE----KDNEDVEMSS-DDENVVVDS 90 K++ K E + L++ K+++KVLED+ K V +++ DDEN + S Sbjct: 235 KEKTKKQLEEEEHGYERFLLESAQSKEARKVLEDLSSSYVKQRPSVLVNTEDDENGIKPS 294 Query: 91 E 91 + Sbjct: 295 D 295 >SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1402 Score = 23.8 bits (49), Expect = 6.6 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Query: 8 RWKRKCRAIKRERYAVKE-LARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKS 63 R+K++ A+ R A +E R K++ E AGSE S IF ++ + K+S Sbjct: 193 RFKKRISALFRVFLAKQEEKKRAKRLNDAVPLEDMAGSESRPSYDSIFRESFEAKRS 249 >SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosaccharomyces pombe|chr 3|||Manual Length = 680 Score = 23.8 bits (49), Expect = 6.6 Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%) Query: 56 DAGDLKKSKKVLEDIEKDNEDV-EMSSDD 83 DA + K+ LED+E ++D+ E+S +D Sbjct: 8 DAPTILGQKRELEDVEIQDDDIQEVSKED 36 >SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF3c|Schizosaccharomyces pombe|chr 1|||Manual Length = 918 Score = 23.8 bits (49), Expect = 6.6 Identities = 14/55 (25%), Positives = 25/55 (45%) Query: 37 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSE 91 +EE + SE SE+ + +++ KK +D+E SS++E E Sbjct: 44 EEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSEEEEETESEE 98 >SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 456 Score = 23.8 bits (49), Expect = 6.6 Identities = 7/31 (22%), Positives = 21/31 (67%) Query: 47 MESEQVIFLDAGDLKKSKKVLEDIEKDNEDV 77 +E+E+ + + G++ K K++++D+ + D+ Sbjct: 216 LEAEEYVPMPKGEVHKRKEIVQDVTLHDLDI 246 >SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces pombe|chr 3|||Manual Length = 384 Score = 23.8 bits (49), Expect = 6.6 Identities = 14/40 (35%), Positives = 22/40 (55%) Query: 37 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNED 76 D K V+ESE+V DA + + +K+ I K++ED Sbjct: 50 DLPKLKAEVVLESEEVGSFDAQNESRDEKLKYLIAKNSED 89 >SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual Length = 500 Score = 23.8 bits (49), Expect = 6.6 Identities = 14/60 (23%), Positives = 25/60 (41%) Query: 36 KDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKK 95 K ++K S ESE +S+ + E + + S +E V+V +E K+ Sbjct: 76 KSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKE 135 >SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 231 Score = 23.8 bits (49), Expect = 6.6 Identities = 14/52 (26%), Positives = 26/52 (50%) Query: 54 FLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKD 105 F D + KK K E E+D ++E + +D+ D+ G ++ + K K+ Sbjct: 104 FTDKKEKKKIAKRKEKRERDWNEIEENFEDKTWEADTTGQFIQIESRKKRKN 155 >SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccharomyces pombe|chr 3|||Manual Length = 1284 Score = 23.8 bits (49), Expect = 6.6 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 43 GSEVMESEQVIFLDAGDLK---KSKKVLEDIEKDNEDVEMSSDDENVVVDS 90 GS+ E+ D GD K K++ E +E DN+++ + ENV DS Sbjct: 1136 GSQPNSVEKTDLAD-GDEKANIKTEMKSETVEGDNKELRETMKGENVQTDS 1185 >SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 1689 Score = 23.4 bits (48), Expect = 8.7 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%) Query: 60 LKKSKKVLEDIEKDNEDVEMSSDDENV 86 LK S KV ED+ D E+ E DE+V Sbjct: 1417 LKGSNKV-EDVNMDEEEDEGFKSDESV 1442 >SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 564 Score = 23.4 bits (48), Expect = 8.7 Identities = 11/28 (39%), Positives = 14/28 (50%) Query: 67 LEDIEKDNEDVEMSSDDENVVVDSEGGK 94 LE E +SD+EN D EGG+ Sbjct: 25 LEPASSRRRLAEENSDEENEEFDEEGGR 52 >SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr 3|||Manual Length = 1516 Score = 23.4 bits (48), Expect = 8.7 Identities = 10/44 (22%), Positives = 25/44 (56%) Query: 59 DLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKT 102 +L++++ ++ D +D E E+ + EN ++ E ++V + T Sbjct: 973 ELEQTRVLISDQSQDGELKELLEEKENALIMMEEEMRQVNDANT 1016 >SPBC337.10c |||anamorsin family protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 288 Score = 23.4 bits (48), Expect = 8.7 Identities = 9/34 (26%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 58 GDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSE 91 G K+L+ ++ D E++ +S DD+ ++D + Sbjct: 136 GQSASKNKILDFLKSDKENL-ISGDDDQELIDED 168 >SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Schizosaccharomyces pombe|chr 3|||Manual Length = 997 Score = 23.4 bits (48), Expect = 8.7 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Query: 38 EEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSE 91 E+K EV++S+ ++ D + KV ED + V D EN ++SE Sbjct: 536 EKKRKFQEVLQSKNILVSSTEDSHEPVKVTED-SQTAIHVSKFEDLENKSMESE 588 >SPBC16G5.12c |top3||DNA topoisomerase III|Schizosaccharomyces pombe|chr 2|||Manual Length = 622 Score = 23.4 bits (48), Expect = 8.7 Identities = 12/44 (27%), Positives = 20/44 (45%) Query: 32 MLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNE 75 +L + D + S + E E + +DA + + E IEK E Sbjct: 476 ILDMMDSSTSSPSYITEPELIALMDANGIGTDATMAEHIEKVQE 519 >SPAC12G12.01c ||SPAC630.02|ubiquitin-protein ligase E3|Schizosaccharomyces pombe|chr 1|||Manual Length = 905 Score = 23.4 bits (48), Expect = 8.7 Identities = 11/37 (29%), Positives = 23/37 (62%) Query: 37 DEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 73 D E + S+V E+++ FL+ L+ ++ V+E ++ D Sbjct: 480 DTELTSMSDVFEAKESKFLEKKILRLARDVIERLDLD 516 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.309 0.128 0.343 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 524,874 Number of Sequences: 5004 Number of extensions: 21947 Number of successful extensions: 136 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 29 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 103 Number of HSP's gapped (non-prelim): 52 length of query: 112 length of database: 2,362,478 effective HSP length: 64 effective length of query: 48 effective length of database: 2,042,222 effective search space: 98026656 effective search space used: 98026656 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.7 bits) S2: 48 (23.4 bits)
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