GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001626-TA|BGIBMGA001626-PA|undefined
         (235 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   1.5  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   2.6  
AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding pr...    24   4.5  
AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding pr...    24   4.5  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)

Query: 212 QAVFSTSEGPVTKNI 226
           Q VF T +GPVT+N+
Sbjct: 628 QLVFDTDDGPVTRNL 642


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/15 (60%), Positives = 13/15 (86%)

Query: 212 QAVFSTSEGPVTKNI 226
           + VF TS+GPVT++I
Sbjct: 675 ELVFETSDGPVTRSI 689


>AY146730-1|AAO12090.1|  131|Anopheles gambiae odorant-binding
           protein AgamOBP22 protein.
          Length = 131

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 51  LENEDGNEERIKALTIKLLKASRLKTASKVGDHYDTTVQCTCEDCEL 97
           L N D  +E   A     L+A  L+T   + +   +  QC  ED E+
Sbjct: 75  LGNSDDADEEFVAKHRACLEAKNLETIEDLCERAYSAFQCLREDYEM 121


>AJ618929-1|CAF02008.1|  144|Anopheles gambiae odorant-binding
           protein OBPjj83b protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 51  LENEDGNEERIKALTIKLLKASRLKTASKVGDHYDTTVQCTCEDCEL 97
           L N D  +E   A     L+A  L+T   + +   +  QC  ED E+
Sbjct: 88  LGNSDDADEEFVAKHRACLEAKNLETIEDLCERAYSAFQCLREDYEM 134


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,782
Number of Sequences: 2123
Number of extensions: 7452
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 4
length of query: 235
length of database: 516,269
effective HSP length: 62
effective length of query: 173
effective length of database: 384,643
effective search space: 66543239
effective search space used: 66543239
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)