GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001626-TA|BGIBMGA001626-PA|undefined
         (235 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001692-1|AAN71447.1|  949|Drosophila melanogaster RE59052p pro...    33   0.34 
AE014298-2651|AAF48788.2|  949|Drosophila melanogaster CG6867-PA...    33   0.34 
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P...    29   4.2  
AY095061-1|AAM11389.1| 1158|Drosophila melanogaster LP03070p pro...    29   5.5  
AF236106-1|AAF36990.1| 1701|Drosophila melanogaster receptor pro...    29   5.5  
AE013599-2319|AAF57973.1| 1701|Drosophila melanogaster CG8250-PA...    29   5.5  
AF210315-1|AAF19646.1| 1133|Drosophila melanogaster bonus protein.     29   7.3  
AE014297-2826|AAF55786.2| 1133|Drosophila melanogaster CG5206-PA...    29   7.3  

>BT001692-1|AAN71447.1|  949|Drosophila melanogaster RE59052p
           protein.
          Length = 949

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 6   RAVDGTVANLDPS-RYSLRSYSDPQKFIV-LDLEGTRPQDFGDYFAVLENE 54
           RA DG +  LDPS +Y + SY +  K  + L +   R  DFG Y  V  NE
Sbjct: 564 RAYDGKI--LDPSDKYGIESYPEGFKTTMRLTISNLRKDDFGYYHCVARNE 612


>AE014298-2651|AAF48788.2|  949|Drosophila melanogaster CG6867-PA
           protein.
          Length = 949

 Score = 33.1 bits (72), Expect = 0.34
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 6   RAVDGTVANLDPS-RYSLRSYSDPQKFIV-LDLEGTRPQDFGDYFAVLENE 54
           RA DG +  LDPS +Y + SY +  K  + L +   R  DFG Y  V  NE
Sbjct: 564 RAYDGKI--LDPSDKYGIESYPEGFKTTMRLTISNLRKDDFGYYHCVARNE 612


>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
            protein.
          Length = 4129

 Score = 29.5 bits (63), Expect = 4.2
 Identities = 11/47 (23%), Positives = 25/47 (53%)

Query: 21   SLRSYSDPQKFIVLDLEGTRPQDFGDYFAVLENEDGNEERIKALTIK 67
            S++  ++P   + L++   +P D G Y  ++ N  G +  + A+ +K
Sbjct: 2177 SIKISTNPDGLVKLEINSCQPNDSGAYKLIISNPHGEKVALCAVAVK 2223


>AY095061-1|AAM11389.1| 1158|Drosophila melanogaster LP03070p
           protein.
          Length = 1158

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 1   MGVMLRAVDGTVANLDPSRYSLRSYSDPQKFIVLDLEGTRPQDFGDYFAVLENEDGNE 58
           MGV+  A  GT  +LD ++YS RS  D  K I ++  G      G Y  +L N+  NE
Sbjct: 291 MGVLKEAGCGTDHDLDLAQYSFRSKQDMVKNIYIE-NGAGGGGGGSYVFLL-NQAKNE 346


>AF236106-1|AAF36990.1| 1701|Drosophila melanogaster receptor
           protein tyrosine kinaseALK splice variant A protein.
          Length = 1701

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 1   MGVMLRAVDGTVANLDPSRYSLRSYSDPQKFIVLDLEGTRPQDFGDYFAVLENEDGNE 58
           MGV+  A  GT  +LD ++YS RS  D  K I ++  G      G Y  +L N+  NE
Sbjct: 834 MGVLKEAGCGTDHDLDLAQYSFRSKQDMVKNIYIE-NGAGGGGGGSYVFLL-NQAKNE 889


>AE013599-2319|AAF57973.1| 1701|Drosophila melanogaster CG8250-PA
           protein.
          Length = 1701

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 1   MGVMLRAVDGTVANLDPSRYSLRSYSDPQKFIVLDLEGTRPQDFGDYFAVLENEDGNE 58
           MGV+  A  GT  +LD ++YS RS  D  K I ++  G      G Y  +L N+  NE
Sbjct: 834 MGVLKEAGCGTDHDLDLAQYSFRSKQDMVKNIYIE-NGAGGGGGGSYVFLL-NQAKNE 889


>AF210315-1|AAF19646.1| 1133|Drosophila melanogaster bonus protein.
          Length = 1133

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 52  ENEDGNEERIKALTIKLLKASRLKTASKVGDHYDTTVQCTCEDCELTD 99
           ++E  NE+   A  +  L   +L    K+    +T  + TC DC+L+D
Sbjct: 220 KDEANNEQLAGAAGVDKLHMCQLHPQEKLSLFCETCDKLTCRDCQLSD 267


>AE014297-2826|AAF55786.2| 1133|Drosophila melanogaster CG5206-PA
           protein.
          Length = 1133

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 52  ENEDGNEERIKALTIKLLKASRLKTASKVGDHYDTTVQCTCEDCELTD 99
           ++E  NE+   A  +  L   +L    K+    +T  + TC DC+L+D
Sbjct: 220 KDEANNEQLAGAAGVDKLHMCQLHPQEKLSLFCETCDKLTCRDCQLSD 267


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,214,245
Number of Sequences: 52641
Number of extensions: 372110
Number of successful extensions: 822
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 817
Number of HSP's gapped (non-prelim): 10
length of query: 235
length of database: 24,830,863
effective HSP length: 83
effective length of query: 152
effective length of database: 20,461,660
effective search space: 3110172320
effective search space used: 3110172320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)