Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001623-TA|BGIBMGA001623-PA|IPR007087|Zinc finger,
C2H2-type
(306 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 38 7e-05
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 38 1e-04
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 36 3e-04
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 36 3e-04
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 36 4e-04
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 28 0.075
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 28 0.075
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 26 0.30
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 24 1.2
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 24 1.6
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 4.9
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 22 6.5
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 22 6.5
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 22 6.5
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 38.3 bits (85), Expect = 7e-05
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Query: 123 IKDQTRG--IQCVICNRYMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSH 180
+KD +R C +CNR YK+ + H CQ C +F L H++ H
Sbjct: 126 VKDSSRDRPFTCEVCNRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRLH 185
Query: 181 ---KPYLNCTICGYTASRDSYFTEHLEKH 206
+PY C C + + HL H
Sbjct: 186 TGERPY-RCEHCDRQFVQVANLRRHLRVH 213
Score = 21.8 bits (44), Expect = 6.5
Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 68 RPQESKDSLLKHTKTDHLLSSPTARKVEREIFVCDHCNGVFFNKFMLTAH 117
RP + +K + ++ L + E+ F CD C G F + L H
Sbjct: 217 RPYGCEHCSMKFSDSNQLKAHVLIHTNEKP-FECDKCRGRFRRRHHLVHH 265
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 37.5 bits (83), Expect = 1e-04
Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 99 FVCDHCNGVFFNKFMLTAHFYFKHIKDQTRGIQCVICNRYMHYKNTW-FHLNNVHMVNTK 157
F C C+ V K H HI++ R + C C YK+ +HL N H +
Sbjct: 202 FKCKQCDFVAITKLEQWNHSKV-HIREDKR-LTCPKCPFITEYKHHLEYHLRN-HAGSKP 258
Query: 158 TACQICLNQFQTTAKLNEHLKSHKPY--LNCTICGYTASRDSYFTEHLEKH 206
C C + LN H+KSH +C C Y HL ++
Sbjct: 259 FQCNKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIHLRRY 309
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 36.3 bits (80), Expect = 3e-04
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%)
Query: 58 ETNHMCLICMRPQESKDSLLKHTKTDHLLSSPTARKVEREIFVCDHCNGVFFNKFMLTAH 117
E + C+ C + +L H +T H P F C C+ F +T H
Sbjct: 19 EKPYRCIDCNKSFSQAANLTAHVRT-HSGEKP---------FRCPVCDRRFSQSSSVTTH 68
Query: 118 FYFKHIKDQTRGIQCVICNRYMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHL 177
R +C +C + +T +H C++CL +F + LN H+
Sbjct: 69 M---RTHSGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRHM 125
Query: 178 KSH 180
+ H
Sbjct: 126 RVH 128
Score = 32.7 bits (71), Expect = 0.003
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 160 CQICLNQFQTTAKLNEHLKSH---KPYLNCTICGYTASRDSYFTEHLEKH 206
C C F A L H+++H KP+ C +C S+ S T H+ H
Sbjct: 24 CIDCNKSFSQAANLTAHVRTHSGEKPF-RCPVCDRRFSQSSSVTTHMRTH 72
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 36.3 bits (80), Expect = 3e-04
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%)
Query: 58 ETNHMCLICMRPQESKDSLLKHTKTDHLLSSPTARKVEREIFVCDHCNGVFFNKFMLTAH 117
E + C+ C + +L H +T H P F C C+ F +T H
Sbjct: 275 EKPYRCIDCNKSFSQAANLTAHVRT-HSGEKP---------FRCPVCDRRFSQSSSVTTH 324
Query: 118 FYFKHIKDQTRGIQCVICNRYMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHL 177
R +C +C + +T +H C++CL +F + LN H+
Sbjct: 325 M---RTHSGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRHM 381
Query: 178 KSH 180
+ H
Sbjct: 382 RVH 384
Score = 35.9 bits (79), Expect = 4e-04
Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Query: 124 KDQTRGIQCVICNR-YMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSH-- 180
+D + C IC + Y HL H C C F A L H+++H
Sbjct: 244 EDNQKPNVCRICGKSYARPSTLKTHLRT-HSGEKPYRCIDCNKSFSQAANLTAHVRTHSG 302
Query: 181 -KPYLNCTICGYTASRDSYFTEHLEKH 206
KP+ C +C S+ S T H+ H
Sbjct: 303 EKPF-RCPVCDRRFSQSSSVTTHMRTH 328
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 35.9 bits (79), Expect = 4e-04
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 131 QCVICNRYMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSH--KPYL---- 184
QCVIC+R + K+ H C+IC F T L H+ H KP +
Sbjct: 136 QCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLH 195
Query: 185 NCTICGYTASRDSYFTEHLEKH 206
C +C + +H+ H
Sbjct: 196 QCPVCHKKFTNALVLQQHIRLH 217
Score = 29.5 bits (63), Expect = 0.032
Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 13/108 (12%)
Query: 33 WLSETEADLHRKIAHFPELIS--KSKCETNHMCLICMRPQESKDSLLKHTKTDHLLSSPT 90
W S E + + +L+ + K + C+IC R K +L H +T H P
Sbjct: 105 WESLIEVTKTSETSKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRT-HTGERP- 162
Query: 91 ARKVEREIFVCDHCNGVFFNKFMLTAHFYFKHIKDQTRGI-QCVICNR 137
F C C F K L H K R + QC +C++
Sbjct: 163 --------FKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHK 202
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 28.3 bits (60), Expect = 0.075
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%)
Query: 173 LNEHLKSH---KPYLNCTICGYTASRDSYFTEHLEKHRKSNV 211
L HL++H KP+ C C YT S H++ H SNV
Sbjct: 4 LEYHLRNHAGSKPF-QCNKCDYTCVNKSMLNSHMKSH--SNV 42
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 28.3 bits (60), Expect = 0.075
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 104 CNGVFFNKFMLTAHFYFKHIKDQTRGIQCVICN-RYMHYKNTWFHLNNVHMVNTKTACQI 162
C V+ L AH + H ++ + C R+ HL H + AC I
Sbjct: 322 CGKVYGKTSHLKAHLRW-HTGERPFVCNWLFCGKRFTRSDELQRHLRT-HTGEKRFACPI 379
Query: 163 CLNQFQTTAKLNEHLKSH 180
C +F + L +H+K+H
Sbjct: 380 CNKRFMRSDHLAKHVKTH 397
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 58 ETNHMCLICMRPQESKDSLLKHTKT 82
E C IC + D L KH KT
Sbjct: 372 EKRFACPICNKRFMRSDHLAKHVKT 396
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 26.2 bits (55), Expect = 0.30
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 131 QCVICN-RYMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSH---KPYLNC 186
+C C+ R+ + H+ +H C+ C QF A L HL+ H +PY C
Sbjct: 11 ECQECHKRFTRDHHLKTHMR-LHTGERPYRCEHCDRQFVQVANLRRHLRVHTGERPY-GC 68
Query: 187 TIC 189
C
Sbjct: 69 EHC 71
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 99 FVCDHCNGVFFNKFMLTAHFYFKHIKDQTRGIQCVICNR 137
F+C +CN F + L H + R C IC +
Sbjct: 80 FICKYCNRQFTKSYNLLIH---ERTHTDERPYSCDICGK 115
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 132 CVICNR-YMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEH 176
C CNR + N H H +C IC F+ L +H
Sbjct: 82 CKYCNRQFTKSYNLLIH-ERTHTDERPYSCDICGKAFRRQDHLRDH 126
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 70 QESKDSLLKHTKTDHLLSSPTARKVEREIFVC 101
QE + + K TK HL +SP ++KV +C
Sbjct: 495 QEVLNRVRKPTKKLHLKNSPISKKVRPPQVLC 526
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.2 bits (45), Expect = 4.9
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 160 CQICLNQFQTTAKLNEHLKSHKPYLN 185
C C F++ A++ H++ + Y N
Sbjct: 481 CMWCGQSFRSLAEMTSHMQQTQHYTN 506
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 177 LKSHKPYLNCTICGYTASRDSYFTEHLEKH 206
+++H CTIC SR H+ H
Sbjct: 1 IRTHTLPCKCTICPKAFSRPWLLQGHIRTH 30
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 98 IFVCDHCNGVFFNKFMLTAHFYFKHIKDQ 126
IF CD C G FF + + Y KD+
Sbjct: 52 IFACDGCAG-FFKRSIRRNRQYVCKAKDE 79
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 98 IFVCDHCNGVFFNKFMLTAHFYFKHIKDQ 126
IF CD C G FF + + Y KD+
Sbjct: 52 IFACDGCAG-FFKRSIRRNRQYVCKAKDE 79
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.319 0.131 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,827
Number of Sequences: 317
Number of extensions: 3897
Number of successful extensions: 30
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 22
length of query: 306
length of database: 114,650
effective HSP length: 57
effective length of query: 249
effective length of database: 96,581
effective search space: 24048669
effective search space used: 24048669
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)
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