Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001623-TA|BGIBMGA001623-PA|IPR007087|Zinc finger,
C2H2-type
(306 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 33 0.051
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 32 0.12
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 31 0.16
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 31 0.16
SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual 30 0.36
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 30 0.36
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 30 0.48
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 29 1.1
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 28 1.5
SPAC688.14 |||lysine methyltransferase |Schizosaccharomyces pomb... 28 1.5
SPCC1827.05c |||nucleolar RNA-binding protein NIFK |Schizosaccha... 28 1.9
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 28 1.9
SPAC16E8.10c |||mitochondrial ribosomal protein subunit S7|Schiz... 27 3.4
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 27 3.4
SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon... 27 3.4
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 27 3.4
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.5
SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|... 27 4.5
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 5.9
SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27 |Schizo... 26 5.9
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 26 7.8
SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual 26 7.8
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 33.1 bits (72), Expect = 0.051
Identities = 22/123 (17%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 139 MHYKNTWFHLNNVHMVNT--KTACQICLNQFQTTAKLNEHL-KSHKPYLNCTICGYTASR 195
+H+K+ W H N V + + ++ + + K NE + K + Y NC +C
Sbjct: 22 IHWKSDWHHYNLKRKVASLPPLSAEVFAGKILSIQKQNEEVQKKAEFYQNCEVCNKKFYS 81
Query: 196 DSYFTEHL-EKHRKSNVTSVKNHKQYFTRMKKYHNYSLYSDDNEVPEAQISDNENSEVDI 254
+ ++ H+ K + N++ + + + +++ S+ S + E + E D+
Sbjct: 82 EGAYSSHMASKKHRDNLSKFQRNSR-IKKLQSEDASSIASSTLSMGEPVVDSEIEEEEDL 140
Query: 255 SDK 257
+ +
Sbjct: 141 ASQ 143
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 31.9 bits (69), Expect = 0.12
Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 6/115 (5%)
Query: 68 RPQESKDSLLKHTKTDHLLSSPTARKVERE-IFVCDH--CNGVFFNKFMLTAHFYFKHIK 124
RP+ + L K+++ SS + + + +VC CN F + L +H +
Sbjct: 538 RPRSRSLNSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHM---NTH 594
Query: 125 DQTRGIQCVICNRYMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHLKS 179
R QC IC + ++ +H AC C +F LN H KS
Sbjct: 595 TNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 31.5 bits (68), Expect = 0.16
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 99 FVCDHCNGVFFNKFMLTAHFYFKHIKDQTRGIQ 131
F+C HC+ F +L H KH+K G Q
Sbjct: 47 FICPHCSSSFTRSDVLNRHVNQKHVKQNDAGSQ 79
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 31.5 bits (68), Expect = 0.16
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 7/106 (6%)
Query: 183 YLNCTICGYTASRDSYFTEHLEKHR---KSNVTSVKNHKQYFTRMKKYHNYSLYSDDNEV 239
Y TI + E L K R K + + N ++ K +L +++
Sbjct: 9 YTQTTIPTQQKRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQM 68
Query: 240 PEAQISDN---ENSEVDISDKEIPETQISDIENTYIQINDDKEINT 282
EA +S E ++D D+E ETQ D+ NT +Q +D +I T
Sbjct: 69 -EADLSQKHATERQKLDKGDEETNETQQEDLLNTLLQQMEDTKITT 113
>SPBC4F6.12 |||LIM domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 30.3 bits (65), Expect = 0.36
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 88 SPTARKVEREIFVCDHCN------GVFFNKFMLTAHF-YFKHIKDQTRGIQCVICNRYMH 140
S + +K+ + F CD C+ G ++ + H Y + + + + I ++ +H
Sbjct: 272 SASGKKLHPQCFKCDTCSQNLEHVGFYYREGKFYCHLDYHEQFSPRCKHCKTPIEDQAVH 331
Query: 141 YKNTWFHLNN 150
N WFH N+
Sbjct: 332 INNDWFHENH 341
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 30.3 bits (65), Expect = 0.36
Identities = 34/162 (20%), Positives = 72/162 (44%), Gaps = 21/162 (12%)
Query: 77 LKHTKTDHLLSSPTARKVEREIFVCDHCNGV--FFNKFMLTAHFYFKH---IKDQTRGIQ 131
L+H +T +S+ A+ ++REI+ N F + +FY H +K+ + I+
Sbjct: 288 LEH-RTFLTISNSAAKDMKREIYEKSLVNWEYDFLVPSKIQDYFYDVHSLLLKNLSSKIK 346
Query: 132 CVICNRYMHYKNTWFHLNN-----------VHMVNTKTACQICLNQFQTTAKLNEHLKSH 180
+CN + Y+ T+ + N + M N + + Q +N++L
Sbjct: 347 --LCNHILMYQATFNEVKNFLQTYSLNMLSIEMENIEGSLYFGNAQLSNLICVNQYLSEQ 404
Query: 181 KP-YLNCTICGYTASRDSYFTEHLEKHRKSNVTSVKNHKQYF 221
+P + N + ++ + ++K R ++++K HK+YF
Sbjct: 405 RPVFFNRLLALGNVENNNSIYDDIQK-RTERISTIKRHKKYF 445
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 29.9 bits (64), Expect = 0.48
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 147 HLNNVHMVNTKTACQICLNQFQTTAKLNEHL------KSHKPYLNCTICGYTASRDSYFT 200
H++ +H N C C +F L HL K+HKPY+N +
Sbjct: 256 HISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAHKPYINECGIKHDGIEGVAIH 315
Query: 201 EHLEKHRKSNVTS 213
+ EK SN+ S
Sbjct: 316 DQKEKELSSNLVS 328
Score = 29.1 bits (62), Expect = 0.84
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 145 WFHLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSHKPYL------NCTI--CGYTASRD 196
W L N +C IC QF+T A L H+ H+ L +C + C + +R
Sbjct: 191 WSQLQNHIREAHVPSCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRS 250
Query: 197 SYFTEHLEKHRKSNV 211
S +H+ + N+
Sbjct: 251 SALKKHISVIHEGNM 265
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 28.7 bits (61), Expect = 1.1
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 209 SNVTSVKNHKQYFTRMKKYHNYSLYSDDNEVPEAQISDNENSEVDISDKEIPETQISDIE 268
+N+TS+ K+ T +K SL+ ++ ++ S EN + D+S E D
Sbjct: 453 ANITSINERKENLTDKRK----SLWREEAKLK----SSIENVKDDLSRSEKALGTTMD-R 503
Query: 269 NTYIQINDDKEINTNIEMEGNLTKECHVYAVQEEYEI 305
NT I K+I +++EG C ++ V +++
Sbjct: 504 NTSNGIRAVKDIAERLKLEGYYGPLCELFKVDNRFKV 540
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 187 TICGYTASRDSYFTEHLEKHRKSNVTSVKNHKQYFTRMKKYHNYSLYS-DDNEVPEAQIS 245
TI + +S+F E L H + +++VKN+ + K H+++ S DN P + S
Sbjct: 307 TIQSPLKTSNSFFKE-LSPHSQITLSNVKNNHSHVGSQTKSHSFATPSVFDNNKPVS--S 363
Query: 246 DNENS 250
DN N+
Sbjct: 364 DNHNN 368
>SPAC688.14 |||lysine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 461
Score = 28.3 bits (60), Expect = 1.5
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 205 KHRKSNVTSVKNHKQYFTRMKKYHNYSLYSDDNEV-PEAQISDNENSEVDISDKEIPETQ 263
K K+ + KN +K H+ SL ++ EV E + SD E SEVD + E
Sbjct: 195 KEDKNGDAAKKNEGSANQDDEKLHSQSLVGNNCEVNSEDEFSDLE-SEVDPDELEKAMCP 253
Query: 264 ISDIENTYIQINDDKEINTNI-EMEGNLT 291
ISD+ N DD+ N + ++ G LT
Sbjct: 254 ISDMFN-----GDDELCNIRLYDINGTLT 277
>SPCC1827.05c |||nucleolar RNA-binding protein NIFK
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 276
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 228 HNYSLYS---DDNEVPEAQISDNENSEVDISDKEIPETQISDIEN 269
HNY LY +PE Q+ +N D+ K IP I+ +++
Sbjct: 167 HNYLLYGKLLQCKVIPEDQVHENMFKGADVPFKRIPHATIARLQH 211
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 130 IQCVICNRYMHYKNTWFHLNNVHMVNTKTACQICLNQ 166
I C IC R HY + N + +K C IC+ Q
Sbjct: 1368 IDCTICERRFHYDCVGLN-NEIADSVSKFTCPICMEQ 1403
>SPAC16E8.10c |||mitochondrial ribosomal protein subunit
S7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 259
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 247 NENSEVDISDKEIPETQISDIENTYIQINDDKEINTNIEMEGNLTKECHV 296
NE E DI+++ P+ + +EN Q+ D E + + + G L K+ V
Sbjct: 44 NEKIE-DINERSNPQWDNAGLENLLNQLQDSVEQSASDDFMGELEKKIEV 92
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 267 IENTYIQINDDKEINTNIEMEG--NLTKECHVYAVQEEYEI 305
I +Y+++ND E+NT++ ++G + K + Y Q + E+
Sbjct: 565 IPASYVKLND--ELNTSVTLDGDSSYVKALYAYTAQSDMEL 603
>SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 27.1 bits (57), Expect = 3.4
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 223 RMKKYHNYSLYSDDNEVPEAQISDNENSEVDISDKEIPETQISDIEN-TYIQINDDKE-- 279
R ++YH D+ E EA +E+ +SD E ET S E+ +I + ++
Sbjct: 442 RGQEYHAEEDSDDEGEFMEASGLIESTNELHLSDSESSETSSSSEEDMEFIPFSARRDSA 501
Query: 280 --INTNIEMEGNLTKECH---VYAVQEEYEIE 306
IN+ EG+ KE A +E ++I+
Sbjct: 502 NTINSEDFDEGDFNKEAQQSLERAFEENHQID 533
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 182 PYLNCTICGYTASRDSYFTEHLEKHRKSNVTSVKNHKQYFTRMKKYHNYSLYSDDNE 238
P L+C+ G RD FT+ H N+T+ K+ + K + + +DNE
Sbjct: 22 PTLSCSSKGAMQERDVMFTD----HNTFNITNNKSRPGSLMKSMKRKDVYEFDEDNE 74
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 242 AQISDNENSEVDISDKEIPETQISDIENTYIQINDDKE 279
+QISD+E E +D+E + + SD+E + ++DD++
Sbjct: 228 SQISDDEEDEEGSADEE--DEEDSDVELSESSLSDDED 263
>SPBC1604.09c |||exoribonuclease Rex4 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 260
Score = 26.6 bits (56), Expect = 4.5
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 215 KNHKQYFTRMKKYHNYSLYSDDNEVPEAQISD 246
+N Y K+ + ++ +N++PE+Q+ D
Sbjct: 41 ENENSYIVDKKRMNELKKFAKENDIPESQVLD 72
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/82 (20%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 204 EKHRKSNVTSVKNHKQYFTRMKKYHNYSLYSDDNEVPEAQISDNENSEVDISDKEIPETQ 263
++ ++S K+ K+ ++ K+ + S S+D+E+P + + N+ + ++ + I E
Sbjct: 934 DEEKQSGKKKKKDRKKRKSKSKQESSDSGVSEDDEIPLSD-ARNKTKKRRVNRRVISEEY 992
Query: 264 ISDIENTYIQINDDKEINTNIE 285
D +++ + N ++E++ IE
Sbjct: 993 TFD-QDSDAEGNQEEEVSRTIE 1013
>SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 413
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 211 VTSVKNHKQYFTRMKKYHNYSLYSDDNE 238
+T+++ Y ++ + Y+LYSD+NE
Sbjct: 71 LTNIQKKSLYSLQLGRSRGYALYSDENE 98
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 218 KQYFTRMKKYHNYSLYSDDNEVPEAQISDN 247
K F + K+H Y L+S + E+P +D+
Sbjct: 582 KSVFLKWLKWHLYHLFSKEGELPFFSFTDS 611
>SPBC409.19c |||metaxin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 450
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 236 DNEVPEAQISDNENSEVDISDKEIPETQISDIENTYIQINDDKEINTNIEMEGN 289
+ E EA + ++++ I +KEI ET S + + + KE+ E E +
Sbjct: 347 ETEDDEASFEEVDDAKESIQEKEIDETTESKATHDSSETSSSKELPKEEEKESS 400
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.131 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,568,165
Number of Sequences: 5004
Number of extensions: 70905
Number of successful extensions: 312
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 296
Number of HSP's gapped (non-prelim): 30
length of query: 306
length of database: 2,362,478
effective HSP length: 72
effective length of query: 234
effective length of database: 2,002,190
effective search space: 468512460
effective search space used: 468512460
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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