Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001623-TA|BGIBMGA001623-PA|IPR007087|Zinc finger,
C2H2-type
(306 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g16090.1 68415.m01845 zinc finger protein-related contains si... 33 0.18
At5g27000.1 68418.m03221 kinesin motor protein-related non-conse... 32 0.55
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 32 0.55
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 32 0.55
At2g42450.1 68415.m05252 lipase class 3 family protein similar t... 31 0.73
At1g22060.1 68414.m02759 expressed protein 31 0.73
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 31 0.97
At3g14120.2 68416.m01786 expressed protein similar to Nuclear po... 30 1.7
At3g14120.1 68416.m01785 expressed protein similar to Nuclear po... 30 1.7
At1g16630.1 68414.m01992 expressed protein 30 2.2
At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing pr... 30 2.2
At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains ... 30 2.2
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 29 3.0
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 29 3.0
At2g37990.1 68415.m04663 ribosome biogenesis regulatory protein ... 29 3.0
At1g55700.1 68414.m06378 DC1 domain-containing protein contains ... 29 3.0
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 29 3.0
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 29 3.9
At4g15090.1 68417.m02318 far-red impaired response protein (FAR1... 29 3.9
At3g26260.1 68416.m03276 Ulp1 protease family protein contains P... 29 3.9
At5g49680.1 68418.m06151 cell expansion protein, putative simila... 29 5.2
At5g20610.1 68418.m02448 expressed protein 29 5.2
At3g25680.1 68416.m03196 expressed protein 29 5.2
At2g39640.1 68415.m04860 glycosyl hydrolase family 17 protein 29 5.2
At5g16500.1 68418.m01928 protein kinase family protein contains ... 28 6.8
At4g26030.1 68417.m03748 hypothetical protein 28 6.8
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 28 6.8
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 28 6.8
At5g41140.1 68418.m05001 expressed protein 28 9.0
At5g12360.1 68418.m01454 expressed protein ; expression supporte... 28 9.0
At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger) fa... 28 9.0
At4g33880.1 68417.m04807 basic helix-loop-helix (bHLH) family pr... 28 9.0
At2g24210.1 68415.m02892 myrcene/ocimene synthase (TPS10) nearly... 28 9.0
At1g53420.1 68414.m06054 serine/threonine protein kinase-related... 28 9.0
At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01... 28 9.0
>At2g16090.1 68415.m01845 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 593
Score = 33.5 bits (73), Expect = 0.18
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 186 CTICGYTASRDSYFTE----HLEKHRKSNVTSVKNHKQYFTRMKKYHN-YSLYSDDNEVP 240
C +CG RD + + ++ ++ K+ R YHN Y + D +++
Sbjct: 309 CWLCGEATGRDHTWARISGHSCGRFQEDKEKQMERAKRDLKRYMHYHNRYKAHIDSSKL- 367
Query: 241 EAQISDNENSEVDISDKEIPETQISD 266
EA++S+N + +V IS+K E Q+ D
Sbjct: 368 EAKLSNNISKKVSISEKR--ELQLKD 391
>At5g27000.1 68418.m03221 kinesin motor protein-related
non-consensus AT donor splice site at exon 12;
non-consensus AC acceptor splice site at exon 13
Length = 987
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 173 LNEHLKSHKP-YLNCTICGYTASRDSYFTEHLEKHRKSNVTSVKNHKQYFTRMKKYHNYS 231
++E +KS P + + G R+S E ++KH + N + F + S
Sbjct: 822 IHELMKSSSPAWPRQPLNGKDEDRESKSGEWIDKHEELIQNQNPNSPEQFYQSMVPQQQS 881
Query: 232 LYSDDNEVPEAQISDNENSEVDISD 256
LY + I+DNE+ E SD
Sbjct: 882 LYGGKQDFEVQSITDNESDEAATSD 906
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 122 HIKDQTRGIQCVICNRYMHYKNTWFHLNNVHMVNT--KTACQI--CLNQFQTTAKLNEHL 177
HI+ + I C IC KN HL ++ + C++ C + F + L +H+
Sbjct: 267 HIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHM 326
Query: 178 KSHKPYLNCTICGYTASRDSYFTEHL-EKHRKS 209
K+ + +CG+ + +H+ KH S
Sbjct: 327 KAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 359
Score = 31.5 bits (68), Expect = 0.73
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 12/90 (13%)
Query: 160 CQICLNQFQTTAKLNEHLKSH--KPYLNCTI--CGYTASRDSYFTEHLEKHR-KSNVTSV 214
CQ C +F+ A L +H++SH + C + C + R + HL H+ K
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKGKLFKCPK 127
Query: 215 KNHKQYFT-------RMKKYHNYSLYSDDN 237
+N K F+ +KKYH+ DN
Sbjct: 128 ENCKSEFSVQGNVGRHVKKYHSNDNRDKDN 157
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 163 CLNQFQTTAKLNEHLKSHKPYLNCTICGYTASRDSYFTEHLEKH 206
C+ F L H++S ++NC ICG + + HL H
Sbjct: 254 CMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKN-IKRHLRTH 296
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 31.9 bits (69), Expect = 0.55
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 122 HIKDQTRGIQCVICNRYMHYKNTWFHLNNVHMVNT--KTACQI--CLNQFQTTAKLNEHL 177
HI+ + I C IC KN HL ++ + C++ C + F + L +H+
Sbjct: 179 HIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHM 238
Query: 178 KSHKPYLNCTICGYTASRDSYFTEHL-EKHRKS 209
K+ + +CG+ + +H+ KH S
Sbjct: 239 KAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 271
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 163 CLNQFQTTAKLNEHLKSHKPYLNCTICGYTASRDSYFTEHLEKH 206
C+ F L H++S ++NC ICG + + HL H
Sbjct: 166 CMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKN-IKRHLRTH 208
>At2g42450.1 68415.m05252 lipase class 3 family protein similar to
calmodulin-binding heat-shock protein CaMBP [Nicotiana
tabacum] GI:1087073; contains Pfam profile PF01764:
Lipase, PF03893: Lipase 3 N-terminal region
Length = 546
Score = 31.5 bits (68), Expect = 0.73
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 199 FTEHLEKHRKSNVTS-VKNHKQYFTRM----KKYHNYSLYSDDNEVPEAQISDNENSEVD 253
+T +EK NV V N KQ T + +K +Y+ + + EVPE S N S +
Sbjct: 392 WTSVIEKEEWKNVLDLVTNAKQVVTSVQDVARKVSDYANFGNKKEVPEIPSSKNNQSGIL 451
Query: 254 ISD 256
ISD
Sbjct: 452 ISD 454
>At1g22060.1 68414.m02759 expressed protein
Length = 1999
Score = 31.5 bits (68), Expect = 0.73
Identities = 27/148 (18%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 150 NVHMVNTKTACQICLNQF--QTTAKLNEHLKSHKPYLNC-TICGYTASRDSYFTEHLEKH 206
+V ++ TK IC+N+F Q + N HL+ K Y + + + + T +++++
Sbjct: 1357 DVQLIFTKIQSDICINEFAEQLSCCSNSHLEFQKKYTDVESALNHCLVNE---TRYMDEN 1413
Query: 207 RKSNVTSVKNHKQYFTRMKKYHNYSLYSDDNEVP-EAQISDNENSEVDISDKEIPETQIS 265
+ + + + M K + +D+ E + +EN+E S++ + ++
Sbjct: 1414 NQLLINLEVLKSELESSMAKSRALADRNDEMSAELEEHATRDENAERSYSERSLCAPEVE 1473
Query: 266 DIENTYIQINDDKEINTNIEMEGNLTKE 293
+++ ++ E T ++ E +T E
Sbjct: 1474 QLKSLLFGYEEEIENLTVLKAEAEITVE 1501
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 31.1 bits (67), Expect = 0.97
Identities = 24/101 (23%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 192 TASRDSYFTEHLEKHRKSNVTSVKNHKQYFTRMK-KYHNYSLYSDDNEVPEAQISDNENS 250
++S++ E E K +S + ++ T +K K + S ++N+ E + S+++
Sbjct: 361 SSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKKSSESQRK 420
Query: 251 EVDISDKEIPETQISDIENTYIQINDDKEINTNIEMEGNLT 291
E S+K+I + + +D NT Q D+++ + + GN T
Sbjct: 421 ENTNSEKKIEQVESTDSSNT--QKGDEQKTDESKRESGNDT 459
>At3g14120.2 68416.m01786 expressed protein similar to Nuclear pore
complex protein Nup107 (Nucleoporin Nup107) (107 kDa
nucleoporin) (p105) (Swiss-Prot:P52590) [Rattus
norvegicus]
Length = 1077
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 187 TICGYTASRDSYFTEH---LEKHRKSNVTSVKNHKQYFTRMKKYHNYSLYSDDN-EVPEA 242
T+ Y A +E+ LE + N+ ++ +Y++ KY N+ + +N EV E
Sbjct: 763 TLLSYLAEPLKQLSENPDTLEDYVSENLQEFQDWNEYYSCDAKYRNWLKFQLENAEVTE- 821
Query: 243 QISDNENSEVDISDKEIPETQIS 265
+S+ EN + ++ KE ++ +S
Sbjct: 822 -LSEEENQKAVVAAKETLDSSLS 843
>At3g14120.1 68416.m01785 expressed protein similar to Nuclear pore
complex protein Nup107 (Nucleoporin Nup107) (107 kDa
nucleoporin) (p105) (Swiss-Prot:P52590) [Rattus
norvegicus]
Length = 1101
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 187 TICGYTASRDSYFTEH---LEKHRKSNVTSVKNHKQYFTRMKKYHNYSLYSDDN-EVPEA 242
T+ Y A +E+ LE + N+ ++ +Y++ KY N+ + +N EV E
Sbjct: 763 TLLSYLAEPLKQLSENPDTLEDYVSENLQEFQDWNEYYSCDAKYRNWLKFQLENAEVTE- 821
Query: 243 QISDNENSEVDISDKEIPETQIS 265
+S+ EN + ++ KE ++ +S
Sbjct: 822 -LSEEENQKAVVAAKETLDSSLS 843
>At1g16630.1 68414.m01992 expressed protein
Length = 845
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 235 DDNEVPEAQISDNENSEVDISDKEIPETQISDIENTYIQINDDKEINTNIEMEGNLTKEC 294
DDNEV + N E+ E E +I+ T ++N + + ++ EG+ +E
Sbjct: 505 DDNEVEQENEEGKVNLEIVDECDEQAEIKIA----TDTEVNGGERYSESLSEEGHGGQET 560
Query: 295 HVYAVQEEYE 304
V QEEYE
Sbjct: 561 DVVEGQEEYE 570
>At1g15340.1 68414.m01835 methyl-CpG-binding domain-containing
protein contains Pfam profile PF01429: Methyl-CpG
binding domain
Length = 384
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 225 KKYHNYSLYSDDNEVPEAQISDNENSEVDISDKEIPETQISDIENTYIQI-----NDDKE 279
K+Y + ++ N+ + Q SD + +E ++KE ETQ SD++ T + ND K
Sbjct: 303 KEYDEKTTEAEANKENDTQESDEKKTEA-AANKE-NETQESDVKKTEAAVAEEKSNDMKA 360
Query: 280 INTNIEMEGNLTKE 293
+TN +E N ++
Sbjct: 361 EDTNRSLEANQVQQ 374
>At1g09920.1 68414.m01116 TRAF-type zinc finger-related contains
Pfam PF02176: TRAF-type zinc finger; similar to TNF
receptor associated factor 4 (GI:7274404) [Mus musculus]
(GI:7274404); similar to Cysteine rich motif Associated
to Ring and Traf domains protein (mCART1)(GI:1041446)
[Mus musculus]
Length = 192
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 130 IQCVICNRYMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSHKPYLNCTIC 189
I C C+R + N L+ VH C+IC + +L +H P + C++C
Sbjct: 10 IVCNHCDRDIPSLN--IDLHRVHCARNLEKCKICGDMVPKKHAEEHYLNTHAP-IACSMC 66
Query: 190 GYTASRDSY 198
T R+ +
Sbjct: 67 KETIEREIF 75
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 29.5 bits (63), Expect = 3.0
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 18/146 (12%)
Query: 129 GIQCVICN--------RYMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSH 180
G+ C CN R +HYK+ W N V L + + +A E KS+
Sbjct: 3 GLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNKSN 62
Query: 181 K-PYL-NCTIC--GYTASR--DSYFTEHLEKHRKSNVTSVKNHKQY-FTRM--KKYHNYS 231
+ P L C IC GY +S+ + + R S TS+ + R ++ +
Sbjct: 63 EAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLPRRVQHRG 122
Query: 232 LYSDDNEVPEAQI-SDNENSEVDISD 256
DD+E ++ SD E + + SD
Sbjct: 123 SIDDDSEDEWVEVDSDEELAAEEASD 148
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 29.5 bits (63), Expect = 3.0
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 18/146 (12%)
Query: 129 GIQCVICN--------RYMHYKNTWFHLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSH 180
G+ C CN R +HYK+ W N V L + + +A E KS+
Sbjct: 3 GLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTEALFEARQSALAQEKNKSN 62
Query: 181 K-PYL-NCTIC--GYTASR--DSYFTEHLEKHRKSNVTSVKNHKQY-FTRM--KKYHNYS 231
+ P L C IC GY +S+ + + R S TS+ + R ++ +
Sbjct: 63 EAPMLYTCAICAKGYRSSKAHEQHLQSRSHVLRVSQGTSINGEEDIAIIRQLPRRVQHRG 122
Query: 232 LYSDDNEVPEAQI-SDNENSEVDISD 256
DD+E ++ SD E + + SD
Sbjct: 123 SIDDDSEDEWVEVDSDEELAAEEASD 148
>At2g37990.1 68415.m04663 ribosome biogenesis regulatory protein
(RRS1) family protein contains Pfam profile PF04939:
Ribosome biogenesis regulatory protein (RRS1); similar
to Ribosome biogenesis regulatory protein homolog
(Swiss-Prot:Q15050) [Homo sapiens]
Length = 318
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 203 LEKHRKSNVTSVKNHKQYFTRMKKYHNYSLYSDDNEVPEAQISDNENSEVDISDKEIPE 261
++K +K V + Q+ K+ H Y +DDN+VP + +++ VD K + +
Sbjct: 103 IQKRKKEKVVWDEQTNQF----KRRHGYDRVNDDNDVPIIEAKESDEPGVDPFAKRLDD 157
>At1g55700.1 68414.m06378 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 679
Score = 29.5 bits (63), Expect = 3.0
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 17/162 (10%)
Query: 131 QCVICNRYMHYKNTWFHLN-NVHMVNTKTACQICLNQFQTTAKLNEH-LKSHKPY-LNCT 187
+C+IC H++ T +HL+ + + +C + L + ++ H L+ Y +C
Sbjct: 39 KCLICRTKKHHR-TKYHLHCDTCDYDIHKSCYL-LPRCRSMPLTRPHTLREGNDYHSSCD 96
Query: 188 ICGYTASRD--SYFTEHLEK--HRKSNVT--SVKN--HKQYFTRMKKYHNYSLYSDDNEV 239
CG S + SY E H+ N+ +++ H Q+ ++ + + S ++D E+
Sbjct: 97 TCGDEVSENDRSYHCPTCEMCYHKVCNLYPHEIRHPFHAQHPLKLT-FSSDSSFTDLKEL 155
Query: 240 P---EAQISDNENSEVDISDKEIPETQISDIENTYIQINDDK 278
P + + SD+E + D SD ++ ISD ++ I+D K
Sbjct: 156 PASWQEEPSDSETEDSDASDDVSSDSSISDDVSSDSSISDLK 197
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/56 (26%), Positives = 22/56 (39%)
Query: 147 HLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSHKPYLNCTICGYTASRDSYFTEH 202
H H V+ + C+ C + + HLK+ + CG SR F EH
Sbjct: 107 HFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKTCGSRGHSCDCGRVFSRVESFIEH 162
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 180 HKPYLNCTICGYTASRDSYFTEHLEKHRKSNVTSVKNHKQ 219
H+ Y CT+CG + S H HRK TS+ + Q
Sbjct: 94 HRDY-KCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQ 132
>At4g15090.1 68417.m02318 far-red impaired response protein (FAR1) /
far-red impaired responsive protein (FAR1) identical to
far-red impaired response protein FAR1 [Arabidopsis
thaliana] gi|5764395|gb|AAD51282; contains Pfam:PF03101
domain: FAR1 family
Length = 768
Score = 29.1 bits (62), Expect = 3.9
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Query: 188 ICGYTASRDSYFTEHLEKHRKSNVTSVKNHKQYFTRMKKYHNYSLYSDDNEVPEAQISDN 247
+CG+ + Y + K KS V + + Q TR+++Y++ L S E+ E
Sbjct: 530 MCGFASIPPQYILKRWTKDAKSGVLAGEGADQIQTRVQRYND--LCSRATELSEEGCVSE 587
Query: 248 ENSEVDISDKEIPETQISDIENTYIQIND-DKEINTNIEMEGN 289
EN + + D+ N I + + ++N E N
Sbjct: 588 ENYNIALRTLVETLKNCVDMNNARNNITESNSQLNNGTHEEEN 630
>At3g26260.1 68416.m03276 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 989
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Query: 232 LYSDDNEVPEAQISDNENSEVDISDKEIPETQISDIENTYIQINDDKEINTNIEMEGNLT 291
+ D +EVP+ D+ +S + E P+ Q+ +N D E N IE E N+T
Sbjct: 544 IVGDSDEVPQDGNHDSPSSSDSPNPDEAPQLQVP--------VNPDTEYNAYIESEPNIT 595
Query: 292 K 292
+
Sbjct: 596 E 596
>At5g49680.1 68418.m06151 cell expansion protein, putative similar
to SABRE [Arabidopsis thaliana] GI:719291
Length = 1378
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 221 FTRMKKYHNYSLYSDDNEVPEAQISDNENSEVDISDKEIPETQISDIENTYIQINDD-KE 279
F R+ K HN SL E E + +E I + E+ + ++ E + + DD ++
Sbjct: 764 FARLPKAHNDSLKLSGEEDDEVEEEIDEVVPDGIEEVELAKIELEAKERDRMMLLDDIRK 823
Query: 280 INTNIEMEGNLTKE 293
+ N GN+ E
Sbjct: 824 LTQNESNSGNINLE 837
>At5g20610.1 68418.m02448 expressed protein
Length = 1164
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 225 KKYHNYSLYSDDNEVPEAQISDNENSEVDISDKEIPETQISDIENTYIQINDDKE 279
K Y S +E EA SD + E + ++ IP+ +I+++ T ++ DK+
Sbjct: 1032 KIYSTVSELKKTDEEEEADASDAKKEEKPMEEQGIPQYKITEVHLTGMKSETDKK 1086
>At3g25680.1 68416.m03196 expressed protein
Length = 558
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 213 SVKNHKQYFTRMKKYHNYSLYSDDNEVPEAQISDNENSEVDISDKEI 259
S K + F+ + +Y N L +DNE E +D NS + + + +
Sbjct: 108 SRKGFRFSFSNLLQYQNVELDQNDNEESETLFNDENNSPSEANSESV 154
>At2g39640.1 68415.m04860 glycosyl hydrolase family 17 protein
Length = 549
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 191 YTASRDSYFTEHLEKHRKSNVTSVKNHKQYFTRMKKYHNYSLYSDDNEVPEAQISDNENS 250
+T + FT+ LE HR++ + N +FT NY+++ N + + +
Sbjct: 176 FTNDQKDIFTKILEFHRQAKSPFMINAYTFFTMDTNNVNYAIFGPSNAITDTNTQQTYTN 235
Query: 251 EVD 253
D
Sbjct: 236 MFD 238
>At5g16500.1 68418.m01928 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 636
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 227 YHNYSLYSDDNEVPEAQISDNENSEVDISDKEIPETQISDIENTYIQIN----DDKE 279
Y NYS +DNE ++ S N E S + NT ++IN DDKE
Sbjct: 491 YSNYSSEEEDNEKLSSKSSCKSNEESTFSRYDSGRDHDDSSRNTSMRINSLAHDDKE 547
>At4g26030.1 68417.m03748 hypothetical protein
Length = 220
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 99 FVCDHCNGVFFNKFMLTAHFYFKHIKDQTR 128
F+C CN +F ML H H K++T+
Sbjct: 158 FICLKCNSLFDTSQMLVVHTELIHSKNETK 187
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 147 HLNNVHMVNTKTACQICLNQFQTTAKLNEHLKSHK 181
HL+N + N C IC F T L H++ H+
Sbjct: 83 HLSNDYKGNHFHKCSICSQSFGTGQALGGHMRRHR 117
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 24 FKCDLCKACWLSETEADLHRKIAHFP-ELISKSKCETNHMCLICMRP 69
F CD+C + E LHR+ + P +L KS E +C P
Sbjct: 83 FICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEP 129
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 27.9 bits (59), Expect = 9.0
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 5/120 (4%)
Query: 190 GYTASRDSYFTEHLEKHRKSNVTSVKNHKQYFTRMKKY-HNYSLYSDDNEVPEAQISDNE 248
G A R L+ RK V K + + L DNE +A SD
Sbjct: 300 GALARRTDLSELELQSLRKQIVKETKRSQDLLREVTSLKQERDLLKADNESNKA--SDKR 357
Query: 249 NSEVDISDKEIPETQISDI--ENTYIQINDDKEINTNIEMEGNLTKECHVYAVQEEYEIE 306
E I +K E + + E T +++ +K++N+N+ ++ T+E + + ++E
Sbjct: 358 KEEAKIRNKLQLEGRDPHVLLEETREELDYEKDLNSNLRLQLQKTQESNTELILAVQDLE 417
>At5g12360.1 68418.m01454 expressed protein ; expression supported
by MPSS
Length = 194
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 196 DSYFTEHLEKHRKSNVTSVKNHKQYFTRMKKYHNYSLYSDDNEVPEAQISD 246
DSYF+EH+ H + T++K + +++ + + + E+P + SD
Sbjct: 101 DSYFSEHIILH--GHETNIKEGVPQYNNIQEIDAENSWDELKEIPMEEFSD 149
>At5g10380.1 68418.m01204 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 301
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 158 TACQICLNQFQTTAKLNEHLK-SHKPYLNC 186
T C +CLN+F+ L K SH +LNC
Sbjct: 133 TECSVCLNEFEEDESLRLLPKCSHAFHLNC 162
>At4g33880.1 68417.m04807 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 352
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 201 EHLEKHRKSNVTSVKNHKQYFTRMKKYHNY-SLYSDDNEVPEAQISDNENSEVDISDKEI 259
+H S + +H+ + + +HN+ SL S+ +Q S + ++ +
Sbjct: 33 DHPGTGSSSGAAASGDHQGLYWNLGSHHNHLSLVSEAGSFCFSQESSSYSAGNSGYYTVV 92
Query: 260 PETQISDIENTYIQIN-DDKEINTNIEMEGNLTKECHV 296
P T + + +N + +D INTN + G T EC V
Sbjct: 93 PPT-VEENQNETMDFGMEDVTINTNSYLVGEETSECDV 129
>At2g24210.1 68415.m02892 myrcene/ocimene synthase (TPS10) nearly
identical to GI:9957293; contains Pfam profile: PF01397
terpene synthase family
Length = 591
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 1 MFRTHSDLVRTPPVQKASCDSEVFKCDLCKA--CWLSETEADLHRKIAHFPELISKSKCE 58
+FR +DLV +P E+ + D+CK+ C++SET A + +H ++I+ E
Sbjct: 479 VFRLANDLVTSP--------DELARGDVCKSIQCYMSETGASEDKARSHVRQMINDLWDE 530
Query: 59 TNH 61
N+
Sbjct: 531 MNY 533
>At1g53420.1 68414.m06054 serine/threonine protein kinase-related
contains 1 predicted transmembrane domain; low
similarity to receptor-like serine/threonine kinase
[Arabidopsis thaliana] GI:2465923
Length = 953
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 228 HNYSLYSDDNEVPEAQISDNENSEVDISDKEI-PETQISDIENTY 271
+N ++ DD VPE ++ +SE+++ D + + +IS I TY
Sbjct: 403 NNVGVFVDDKHVPERVTIESNSSELNVVDFGLYTQARISAISLTY 447
>At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM
TIGR01612: reticulocyte binding protein; contains
TIGRFAM TIGR00864: polycystin cation channel protein;
similar to fimbriae-associated protein Fap1
[Streptococcus parasanguinis] (GI:3929312)
Length = 1498
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/65 (20%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 224 MKKYHNYSLYSDD---NEVPEAQISDNENSEVDISDKEIPETQISDIENTYIQINDDKEI 280
+++ H+ + S D N V E ++ +SE D+ + + + + + + ++ D ++
Sbjct: 172 VEQLHDSEVGSKDLTKNNVEEPEVEIESDSETDVEGHQGDKIEAQEKSDRDLDVSQDLKL 231
Query: 281 NTNIE 285
N N+E
Sbjct: 232 NENVE 236
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.319 0.131 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,763,167
Number of Sequences: 28952
Number of extensions: 333891
Number of successful extensions: 1338
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1320
Number of HSP's gapped (non-prelim): 45
length of query: 306
length of database: 12,070,560
effective HSP length: 81
effective length of query: 225
effective length of database: 9,725,448
effective search space: 2188225800
effective search space used: 2188225800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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