GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001622-TA|BGIBMGA001622-PA|undefined
         (279 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006A2711 Cluster: UPI00006A2711 related cluster; n...    33   8.0  

>UniRef50_UPI00006A2711 Cluster: UPI00006A2711 related cluster; n=2;
           Xenopus tropicalis|Rep: UPI00006A2711 UniRef100 entry -
           Xenopus tropicalis
          Length = 234

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 8/83 (9%)

Query: 39  SYDNGYDDIANVISYYRLNNAQTDIENIFKKHTKGKGIKALTG------SHRLIAQAIWD 92
           S D G   +A + +YY+    +T +     ++T G+ IKALTG      S +L+ +   D
Sbjct: 107 SEDPGVKSVAKIYNYYKKFGYKTIVMGASFRNT-GE-IKALTGCDYLTISPKLLGELAKD 164

Query: 93  LSKLFSLLTVLGALANGYRTGHL 115
            SKL  +LTV  A A+     HL
Sbjct: 165 SSKLTPVLTVKEAQASNLEKVHL 187


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.134    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,477,392
Number of Sequences: 1657284
Number of extensions: 6938593
Number of successful extensions: 11953
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11953
Number of HSP's gapped (non-prelim): 1
length of query: 279
length of database: 575,637,011
effective HSP length: 100
effective length of query: 179
effective length of database: 409,908,611
effective search space: 73373641369
effective search space used: 73373641369
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 72 (33.1 bits)