GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001622-TA|BGIBMGA001622-PA|undefined
         (279 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    23   4.0  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   7.0  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   9.2  

>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/41 (19%), Positives = 20/41 (48%)

Query: 20  IIDDKGICRSDFGKHYGWRSYDNGYDDIANVISYYRLNNAQ 60
           II +     +++  +  + +Y+N Y+     + YY + N +
Sbjct: 81  IISNNNSLSNNYNYNNNYNNYNNNYNTNYKKLQYYNIINIE 121


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 33  KHYGWRSYDNGYDDIANVISYYRLNNAQ 60
           K+  + +Y+N Y+     + YY + N +
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 33  KHYGWRSYDNGYDDIANVISYYRLNNAQ 60
           K+  + +Y+N Y+     + YY + N +
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 33  KHYGWRSYDNGYDDIANVISYYRLNNAQ 60
           K+  + +Y+N Y+     + YY + N +
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 33  KHYGWRSYDNGYDDIANVISYYRLNNAQ 60
           K+  + +Y+N Y+     + YY + N +
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 33  KHYGWRSYDNGYDDIANVISYYRLNNAQ 60
           K+  + +Y+N Y+     + YY + N +
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 33  KHYGWRSYDNGYDDIANVISYYRLNNAQ 60
           K+  + +Y+N Y+     + YY + N +
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query: 33  KHYGWRSYDNGYDDIANVISYYRLNNAQ 60
           K+  + +Y+N Y+     + YY + N +
Sbjct: 90  KYSNYNNYNNNYNTNYKKLQYYNIINIE 117


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 52 SYYRLNNAQTDIENIFKKHTKGKG 75
          +Y++ N+ +TDIE   +   +G G
Sbjct: 64 NYWQCNDKKTDIEETGRGKGRGHG 87


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.134    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,325
Number of Sequences: 429
Number of extensions: 1761
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 279
length of database: 140,377
effective HSP length: 57
effective length of query: 222
effective length of database: 115,924
effective search space: 25735128
effective search space used: 25735128
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 43 (21.4 bits)