Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001621-TA|BGIBMGA001621-PA|IPR007087|Zinc finger,
C2H2-type
(663 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 47 1e-05
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 47 1e-05
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 43 1e-04
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 42 4e-04
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 38 0.003
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 38 0.003
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 38 0.004
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 36 0.018
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 35 0.031
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 34 0.073
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 33 0.13
SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|... 31 0.39
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 31 0.51
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 31 0.68
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 30 0.89
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 30 0.89
SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|c... 30 1.2
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 29 1.6
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 29 1.6
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 29 1.6
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 29 2.1
SPAC959.02 |sec17||alpha SNAP |Schizosaccharomyces pombe|chr 1||... 29 2.1
SPAC6G9.09c |rpl24||60S ribosomal protein L24|Schizosaccharomyce... 29 2.1
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 29 2.7
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 29 2.7
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 28 3.6
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 28 3.6
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 28 3.6
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 28 3.6
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 28 4.8
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 27 6.3
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 27 6.3
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 27 6.3
SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyc... 27 6.3
SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces... 27 8.3
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 27 8.3
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 27 8.3
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 27 8.3
SPAC3F10.15c |spo12||Spo12 family protein|Schizosaccharomyces po... 27 8.3
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 27 8.3
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 573 GRCGECGATFQRYEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHN-HAKQL 631
G G G+ +R + +R + +P G C +C K+F + L RH+ + H +
Sbjct: 391 GTIGTDGSMKRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLHTSEK 450
Query: 632 YRCVVCKASFARADQLAQHLNSHLANYKRL 661
+C F+R D L QH H+ RL
Sbjct: 451 PFVCICGKRFSRRDNLRQHERLHVNASPRL 480
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 504 YECDCCNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHDRTHTD 557
+ C C++ F R E L H H C +C K F L H+R H +
Sbjct: 423 FVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVN 475
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 46.8 bits (106), Expect = 1e-05
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 27/161 (16%)
Query: 504 YEC--DCCNETFNRREKLWEHKAEAHRGSMTVRC--EVCRKCFEDDSELAAH-DRTHTDD 558
Y C + C+E F++ ++L H + H + C + C F +L H +R H
Sbjct: 113 YACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAH--- 169
Query: 559 ERAAMADLSRDDTAGRCGECGATFQRYEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAH 618
E+ + G G F+++ QL+ H AH +P +C+ CG++F A
Sbjct: 170 EKIISYSCPHESCVGHEG-----FEKWSQLQNHIREAH------VP-SCSICGRQFKTAA 217
Query: 619 SLTRH--LHN---HAKQLYRCVV--CKASFARADQLAQHLN 652
L H LH ++ Y C + CK SF R+ L +H++
Sbjct: 218 HLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHIS 258
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Query: 510 NETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHDRTHTDDERAAMADLSRD 569
+E F + +L H EAH S C +C + F+ AAH R H + + + R
Sbjct: 185 HEGFEKWSQLQNHIREAHVPS----CSICGRQFKT----AAHLRHHVVLHQTTLEE--RK 234
Query: 570 DTAGRCGECGATFQRYEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHL 624
C +F R L++H S H M C CG +F + H L RHL
Sbjct: 235 TYHCPMEGCKKSFTRSSALKKHISVIHEG---NMAFHCDSCGTKFGYKHMLQRHL 286
Score = 36.3 bits (80), Expect = 0.014
Identities = 43/160 (26%), Positives = 59/160 (36%), Gaps = 26/160 (16%)
Query: 504 YECDC--CNETFNRREKLWEHKAEAHRGSMTVRCEV--CRKCFEDDSELAAHDRTHTDDE 559
+ CD C++ F R+ L HK H C C F L H H +
Sbjct: 53 FVCDYTGCSKAFYRKSHLKIHK-RCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPK 111
Query: 560 RAAMADLSRDDTAGRCGECGATFQRYEQLRRHRSCAHGAAPDGMPHACA--QCGKRFSHA 617
A T C EC F +++QLR H S H +P+ C C RF+
Sbjct: 112 PYAC-------TWEGCDEC---FSKHQQLRSHISACHTHL---LPYPCTYQDCELRFATK 158
Query: 618 HSLTRHLHN-HAKQL-YRC----VVCKASFARADQLAQHL 651
L H++ H K + Y C V F + QL H+
Sbjct: 159 QKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQNHI 198
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 609 QCGKRFSHAHSLTRHLHNHAKQLYRCVVCK-ASFARADQLAQHLNSHLANYKRLKP 663
+CGK++S L +HL H+ + R VC ++A HL H + +KP
Sbjct: 29 ECGKKYSRPSLLEQHLRTHSNE--RPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKP 82
Score = 30.3 bits (65), Expect = 0.89
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 504 YEC--DCCNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAH 551
Y C + C ++F R L +H + H G+M C+ C F L H
Sbjct: 236 YHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRH 285
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 43.2 bits (97), Expect = 1e-04
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 546 SELAAHDRTHTDDERAAMADLSRDDTAGRCGECGATFQRYEQLRRHRSCAHGAAPDGMPH 605
+ L + ++ +A S+ + C F R L+ H + H + P
Sbjct: 545 NSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMN-TH---TNYRPF 600
Query: 606 ACAQCGKRFSHAHSLTRHLHNHAK-QLYRCVVCKASFARADQLAQHLNSHL 655
C+ C K F+ H RH H + + CV C FAR D L +H S +
Sbjct: 601 QCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEV 651
Score = 35.1 bits (77), Expect = 0.031
Identities = 22/83 (26%), Positives = 31/83 (37%), Gaps = 13/83 (15%)
Query: 509 CNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHDRTHTDDERAAMADLSR 568
CN+ F R L H H +C +C+K F + H++ HT + A
Sbjct: 577 CNKRFTRAYNLKSHM-NTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFA------ 629
Query: 569 DDTAGRCGECGATFQRYEQLRRH 591
C C F R + L RH
Sbjct: 630 ------CVTCNQRFARMDALNRH 646
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 574 RCGECGATFQRYEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNHAKQ 630
+C C +F R RRH G AC C +RF+ +L RH + Q
Sbjct: 601 QCSICKKSFARQHDKRRHEQLHTGIKA----FACVTCNQRFARMDALNRHYKSEVGQ 653
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 610 CGKRFSHAHSLTRHLHNH-AKQLYRCVVCKASFARADQLAQHLNSH 654
C KR + +++ H+ H + + YRC +CKA F R L +HL H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
Score = 36.3 bits (80), Expect = 0.014
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 570 DTAGRCGECGATFQRYEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRH 623
D RC C A F R+ L+RH H +G P+ C +C KRF+ +L RH
Sbjct: 470 DRPYRCDLCKAGFVRHHDLKRHLR-IH---ENGRPYVC-ECLKRFNRLDALNRH 518
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/47 (34%), Positives = 18/47 (38%)
Query: 604 PHACAQCGKRFSHAHSLTRHLHNHAKQLYRCVVCKASFARADQLAQH 650
P+ C C F H L RHL H C F R D L +H
Sbjct: 472 PYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCECLKRFNRLDALNRH 518
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 509 CNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHDRTH 555
CN+ R+ + H + H RC++C+ F +L H R H
Sbjct: 450 CNKRIARKYNVESH-IQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 504 YECDCCNETFNRREKLWEHKAEAHRGSMTVRCEV--CRKCFEDDSELAAHDRTH 555
YEC C F+R+E H +H G C C+K F EL H RTH
Sbjct: 4 YECPFCKRVFHRQEHQVRH-IRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 605 HACAQCGKRFSHAHSLTRHLHNHA-KQLYRCVV--CKASFARADQLAQHLNSHL 655
+ C C + F RH+ +H ++ + C CK F R D+L +H+ +HL
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHL 57
Score = 30.3 bits (65), Expect = 0.89
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Query: 575 CGECGATFQRYEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNHAKQ 630
C C F R E RH G P + C KRF+ L RH+ H ++
Sbjct: 6 CPFCKRVFHRQEHQVRHIRSHTGEKPFECSYP--SCKKRFTRRDELIRHVRTHLRK 59
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 607 CAQCGKRFSHAHSLTRHLHNHAK-QLYRCVVCKASFARADQLAQHL 651
C QC KRF+ +LTRH H+K + C C+ R D L +H+
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHI 78
Score = 35.1 bits (77), Expect = 0.031
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 575 CGECGATFQRYEQLRRHRSCAHGAAPDGMPHACAQCGKR 613
C +C F R+E L RH++C A P P+ +C ++
Sbjct: 33 CDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRK 71
Score = 33.9 bits (74), Expect = 0.073
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 504 YECDCCNETFNRREKLWEHKAEAHRGSMTVRCEVCR-KCFEDDSELAAHDRTHTD 557
+ CD C + F R E L HKA H + + C C KC D R H D
Sbjct: 31 FPCDQCAKRFTRHENLTRHKA-CHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHND 84
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 600 PDG-MPHACAQCGKRFSHAHSLTRHLHNH-AKQLYRCVV--CKASFARADQLAQHLNSHL 655
PD P+ C C K F TRH+ H ++ + C C F+R+D+L +H H
Sbjct: 20 PDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Query: 656 -ANYKR 660
AN +R
Sbjct: 80 NANSRR 85
Score = 37.1 bits (82), Expect = 0.008
Identities = 29/86 (33%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Query: 574 RCGECGATFQRYEQLRRHRSCAHGAAPDGMPHACA--QCGKRFSHAHSLTRHLHNHAKQL 631
+C C F R E RH G P H C C KRFS + LTRH H
Sbjct: 27 KCPLCTKAFYRLEHQTRHIRTHTGEKP----HVCTFPGCAKRFSRSDELTRHARIHTNAN 82
Query: 632 YRCVVCKASFARADQLAQHLNSHLAN 657
R A+ A A+ A+ NS N
Sbjct: 83 SRRNA--AAAAAANNSARSSNSPAGN 106
Score = 33.9 bits (74), Expect = 0.073
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 504 YECDCCNETFNRREKLWEHKAEAHRGSMTVRCEV--CRKCFEDDSELAAHDRTHT--DDE 559
Y+C C + F R E H H G C C K F EL H R HT +
Sbjct: 26 YKCPLCTKAFYRLEHQTRH-IRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHTNANSR 84
Query: 560 RAAMADLSRDDTA 572
R A A + +++A
Sbjct: 85 RNAAAAAAANNSA 97
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 35.9 bits (79), Expect = 0.018
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 586 EQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNHAK-QLYRCVVCKASFARA 644
E+ + RS AH C K F+ L RH H + + C C +FAR+
Sbjct: 9 EKPLKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARS 68
Query: 645 DQLAQHLNS-HL 655
D L +H+ HL
Sbjct: 69 DVLNRHVQQMHL 80
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 610 CGKRFSHAHSLTRHLHNHAK-QLYRCVVCKASFARADQLAQHLN 652
C K F+ RH +H + + C C +SF R+D L +H+N
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVN 67
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 33.9 bits (74), Expect = 0.073
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Query: 535 CEVCRKCFEDDSELAAHDRTHTDDERAAMADLSRDDTAGRCGECGATFQRYEQLRRHRSC 594
CE C + F L H R+HT+++ +++ T CG F R + L RH+
Sbjct: 72 CETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTG-----CGRQFSRRDLLLRHQQK 126
Query: 595 AH 596
H
Sbjct: 127 IH 128
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 632 YRCVVCKASFARADQLAQHLNSH 654
Y C C +FAR + L +H+ SH
Sbjct: 70 YVCETCTRAFARLEHLKRHIRSH 92
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 33.1 bits (72), Expect = 0.13
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 80 KQEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKR--TPD-SKKESNT 136
K+ A A+++ +K + + + A S+ ++ PK +K KR +P+ SKK
Sbjct: 14 KETASKKGAIEKPSKSKKITKEAAKEIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKK 73
Query: 137 TDKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSS--EPINLDSDEE 186
K K K +SE S++++ + S+ +SS E + +S+EE
Sbjct: 74 QKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEE 125
>SPBC1861.01c |cnp3|SPBC56F2.13|CENP-C|Schizosaccharomyces pombe|chr
2|||Manual
Length = 643
Score = 31.5 bits (68), Expect = 0.39
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 129 DSKKESNTTDKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPD 188
+S KE + VK KRGRPRK++ N+ Q +A +V+ P + ++++
Sbjct: 321 NSVKEGESNPVVKRKRGRPRKNKLEIGNSVQTSEA-TQVKGAKKPAIRNAKKMSNEKDDS 379
Query: 189 LGNGS 193
L + S
Sbjct: 380 LNSQS 384
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 31.1 bits (67), Expect = 0.51
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 3/98 (3%)
Query: 106 SATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRK-SEQVSANNKQMPQAK 164
+A SS T +P+ + TP K S + + + + K S+Q + N +
Sbjct: 792 AAPSSQTA--VPQTIHQSNAFTPRGKHASGSRNSISSTKSPQHKLSDQPRSRNNSISNVS 849
Query: 165 IRVRSNLMPDSSEPINLDSDEEPDLGNGSVKDLDSRVE 202
R RSN + S + E D + +D ++E
Sbjct: 850 HRERSNSVSSKSRETRTSASNESDPKKSTQRDSSKKLE 887
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 30.7 bits (66), Expect = 0.68
Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 11/103 (10%)
Query: 534 RCEVCRKCFEDDSELAAHDRTHTDDERAAMADLSRDDTAGRCGECGATFQRYEQLRRHRS 593
+CE C F DD EL H R ER + D AGR F+ Y+ L RH
Sbjct: 246 KCEFCNTHFYDDDELFKHCR--EKHERCYIC----DQVAGR--PTHQYFKNYDSLERHFE 297
Query: 594 CAHGAAPDG--MPHACAQCGKRFS-HAHSLTRHLHNHAKQLYR 633
H + + G AH L H HN ++ R
Sbjct: 298 KDHYICRERECLERKFVVFGTEIDLKAHQLDEHPHNFTQRELR 340
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 30.3 bits (65), Expect = 0.89
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 410 EDERPKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDK 462
ED++P + P + H D +S +D P EN V+E+E+ S D+
Sbjct: 367 EDDQPSADSPTLMHPSDLISSLVNSQNQTTSVSDNTGPNEN-VNEAEHISEDE 418
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 30.3 bits (65), Expect = 0.89
Identities = 23/95 (24%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 86 AQALDRKAKKEHKRRTGGADSATSSATGELI-PKAKRKYTKRTPDSKKESNTTDKVKGKR 144
A + D +++ K+ + S ++TG + PK K TK+ KKE K K K
Sbjct: 157 ASSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKKLEKITKK---KKKEH----KKKDKE 209
Query: 145 GRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPI 179
+K + S++ ++ + KI+++ P+S+ +
Sbjct: 210 SSSKKRKSGSSDKEEKKKKKIKLKDK--PESTSSV 242
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 87 QALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVK 141
+ + +K KKEHK++ S+ +G + K+K + D + +++ +KVK
Sbjct: 193 EKITKKKKKEHKKK-DKESSSKKRKSGSSDKEEKKKKKIKLKDKPESTSSVEKVK 246
>SPAC5D6.02c |mug165||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 300
Score = 29.9 bits (64), Expect = 1.2
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 4/112 (3%)
Query: 97 HKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQVSAN 156
HK + G + + T +P A R +S + KR + RK E V
Sbjct: 35 HKPSSTGLFATLVADTNSSVPSASRSPESIASSQSNDSAAIPSYRRKRRKVRKPEIVKPT 94
Query: 157 NKQMPQAKIRVRSNLMPDSSEP-INLDSDEEPDLGNGSVKD--LDSRVEKLE 205
++ + K + S L D S+P I+ DE+ +L + L+SR +LE
Sbjct: 95 LRKRGR-KPKNISTLEHDKSKPVISSLIDEDANLSQIKARKSVLESRFSRLE 145
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1328
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 115 LIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQVSANNKQM--PQAKIRV 167
LI K+K K++K S + + GKRG+P +S++++ + + P K+++
Sbjct: 1273 LIHKSKSKFSKGNHHSTNGTQSIRGRGGKRGKPLRSKELNRKHDHIVQPMGKLQI 1327
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 29.5 bits (63), Expect = 1.6
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Query: 100 RTGGADSATSSATGELIPKAKRK-YTKRTPDSKKESNTTDKVKGKRGRPRKSEQVSANNK 158
RT D +S T P +K +TK T K + TTD+ R E V ++
Sbjct: 589 RTHSLDENVNSPTSISSPSSKSSPFTKTTSKDTKSATTTDERPSDFIRLNSEESVGTSSL 648
Query: 159 QMPQAKIRVRSNLMPDSSEPINLDS 183
+ Q + SN DSS ++ S
Sbjct: 649 RTSQTTSTIVSN---DSSSTASIPS 670
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 116 IPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQV-SANNKQMPQAKIRVRSNLMPD 174
IP++ K + + D K N+ K +G PRK++Q+ S+ K + ++ +S+ + D
Sbjct: 36 IPRSSAKTKEHSADRKPHRNSEKKTQGM---PRKNQQLASSERKTKNKKRLEKQSSAIAD 92
Query: 175 S 175
S
Sbjct: 93 S 93
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 607 CAQCGKRFSHAHSLTRHLHNHA-KQLYRCVV--CKASFARADQLAQHLNS 653
C + G + +L HL +H ++ + C V C SF R+D LA+H+ +
Sbjct: 80 CPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRT 129
>SPAC959.02 |sec17||alpha SNAP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 289
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 542 FEDDSELAAHDRTHTDDERAAMADLSRDDTAGRCGECGATFQRYEQLRR 590
+ED E + D+ D A A L D AG CGE +++EQ+ R
Sbjct: 138 YEDAGEWYSSDQA---DALANKAYLKAADLAGLCGEYSLAIRKFEQVAR 183
>SPAC6G9.09c |rpl24||60S ribosomal protein L24|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 149
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 87 QALDRKAKKEHKRRTGGADSATSSATGELIPKAK 120
Q D+KA E +++ A SA SSA G+ I AK
Sbjct: 111 QRKDKKAASESEKKAIKAKSAASSARGQAIKNAK 144
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Query: 106 SATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQVSANNKQMPQAKI 165
S+ ++ G+++ A ++ +P N+T + KS + +N + K
Sbjct: 115 SSPNAKAGDIL--ASSLFSSGSPPDTTRRNSTSNLSSVSTNSDKSRTIGSNYNMLQSTKS 172
Query: 166 RVRSNLMPDSSEPINLDSDEE 186
M DSS P S E+
Sbjct: 173 TASQRRMSDSSTPSTTKSKEK 193
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 252 QVYTPTAPLKWT--PKFTPQVYTPRVP--LKCTPQEYPSSVQPKMTPQ 295
Q TP PL T PK P+ ++ + TP++ P S PKM P+
Sbjct: 417 QSSTPRKPLPTTTSPKVNPEPHSESISDTRPSTPRKVPPSTVPKMNPK 464
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 28.3 bits (60), Expect = 3.6
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 412 ERPKEEQPPMAHNEDDSGPAS-----DSDTDPERAADVPPPQENDVSESENESPD--KSF 464
E+PKE P + +E + PAS + T ER+ V P + ++ + +PD KS
Sbjct: 251 EQPKEHSPATSKHEPEETPASPTPSVSASTSRERSTSVAP---SFITSDQAATPDVLKSE 307
Query: 465 QCHI 468
+ H+
Sbjct: 308 EAHV 311
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 612 KRFSHAHSLTRHLHNHAKQLYRCVVCKASFARADQLAQHLNSH 654
++ + +H+ + + A YRC C F+R L H SH
Sbjct: 448 RKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSH 490
Score = 27.5 bits (58), Expect = 6.3
Identities = 28/92 (30%), Positives = 37/92 (40%), Gaps = 19/92 (20%)
Query: 514 NRREKLWEHKAEAHRGSMTV--------RCEVCRKCFEDDSELAAHDRTHTDDERAAMAD 565
+RR A++H GS + RC C + F S L H +HT ER + D
Sbjct: 441 SRRHSTSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHT-GERPFVCD 499
Query: 566 LSRDDTAGRCGECGATFQRYEQLRRHRSCAHG 597
AG CG F +RRH+ HG
Sbjct: 500 Y-----AG----CGKAFNVRSNMRRHQR-IHG 521
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 28.3 bits (60), Expect = 3.6
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 410 EDERPKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPD 461
E P+++ PP + PA D + D + A + DV E + ++ D
Sbjct: 12 EKHAPEQQAPPPQQPAHAAAPAQDDEPDDDIDALIEELFSEDVQEEQEDNDD 63
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 28.3 bits (60), Expect = 3.6
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Query: 268 PQVYTPRVPLKCTPQEYPSSVQPKMTPQEYXXXXXXXXXXXXXXXXXXKWTPKLP-LQVY 326
P ++ P +P+ C P P V P++ P + P LP LQV+
Sbjct: 139 PPLHNP-LPVSCQPVLRPPPV-PQV-PSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVH 195
Query: 327 ASRVP--LKCTPQEYPSSVHPKMTPEEYPSSGPLRL 360
+R+P + P P+S P + P Y S P +L
Sbjct: 196 PNRLPHPIHNHPYSSPTSYPPPLCPATYCPSNPPQL 231
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 413 RPKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPD 461
+P E+ + D SD + D E +AD +++DV SE+ D
Sbjct: 212 KPNIEKQSCSSESDRVSQISDDEEDEEGSADEEDEEDSDVELSESSLSD 260
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 27.5 bits (58), Expect = 6.3
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 90 DRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKR--TPDSKKESNTTDKVKGKRGRP 147
D + K + + + T + ++ PKAK+K +K + SK++ + TD K +
Sbjct: 72 DTQLKGQDSNHKKASLTETKTEKAKVKPKAKKKNSKEKISKSSKQDEHKTDVHKESVSKL 131
Query: 148 RKSEQVSANNKQMPQAKIRVRSN 170
K+ + S NN+ AK R ++N
Sbjct: 132 SKNLE-SRNNRDENSAK-REKNN 152
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 410 EDERPKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSE---SENESPDKS 463
EDE ++ + ++E+D PA S + ER + E +V+E +E E DK+
Sbjct: 110 EDEEKDKDSAGLINDEEDKSPAKQSVLE-ERTSQEDVKSEREVAEKLANELEKSDKT 165
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 411 DERPKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDKSF 464
DE+ EE M ED++ D++ E+ P+EN + + + ++ SF
Sbjct: 53 DEKSGEEDVEMDTMEDENENDEDTEQTSEKKETEETPKENPLEKLKQKASTASF 106
>SPCC594.01 ||SPCC736.16|DUF1769 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 791
Score = 27.5 bits (58), Expect = 6.3
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 92 KAKKEHKRRTGGADSATSSA-----TGELIP-KAKRKYTKRTPDS---KKESNTTDKVKG 142
+ H + DSA+S+ TG L P + + T P S KK +T +K+
Sbjct: 522 RPSSSHSTLSYANDSASSAVNVAGETGSLPPLREQTSITSGVPPSNRLKKHVSTPEKIVE 581
Query: 143 KRGRPRKSEQVSANNKQMPQA 163
+R S+ + ++KQ+PQ+
Sbjct: 582 ERSIDEVSQSNTPSSKQLPQS 602
>SPCC622.10c |||exocyst complex subunit Sec5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 815
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/93 (21%), Positives = 36/93 (38%)
Query: 94 KKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQV 153
+ E RTGGA S T+ P KR+ S + S ++ G P + ++
Sbjct: 49 RSEDILRTGGATSETTKDASAAGPVTPSFAMKRSQTSVQPSMSSQIAIGGMRNPMATRKI 108
Query: 154 SANNKQMPQAKIRVRSNLMPDSSEPINLDSDEE 186
+ + P ++ S + SS + D +
Sbjct: 109 AGTYRDAPDNSMQQTSTGVHRSSSWLTTDGTHQ 141
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 240 QVPLKWTLKCTLQVYTPTAPLKWTPKFTPQVYTPRVPLKCTPQEYPSSVQPKMTPQ 295
Q PL ++K + ++ P + T Y PR P + Y + +MTPQ
Sbjct: 471 QSPLPVSMKPSADDHSRATPTRSVEAPTLPSYAPRHPTQANGSRYMNPSTSRMTPQ 526
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 27.1 bits (57), Expect = 8.3
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 11/94 (11%)
Query: 58 VDYRSPVSHFVPPAVELYAARHKQEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIP 117
+DY P + PA + A EA D K +K + D A
Sbjct: 392 IDYSDPNAEVAKPAPVVAPAAPTVEAEVNGVEDSKKRKSVESSEKDEDEA---------- 441
Query: 118 KAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSE 151
AK++ +R ++KKE + K K+ + +KSE
Sbjct: 442 -AKKEEKRRKKEAKKEKKEKKEKKEKKEKKKKSE 474
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 425 EDDSGPASDSDTDPERAADVPPPQENDVSESENESPDKS 463
E+ S +D + +A+ QE+D++E+ ++PD S
Sbjct: 66 EEPGADFDRSGSDQQYSAEAEANQEDDLNETSQQAPDPS 104
>SPAC3F10.15c |spo12||Spo12 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 90
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 79 HKQEA-MHAQALDRKAKKEHKRRTGG-ADSATSSATGELIPKAKRKYTKRTPDSKKESNT 136
H++ A + Q L + +H DS S T +L K+ Y KR P NT
Sbjct: 22 HQESATLRQQVLQKHELPKHALNVASPTDSLMSPCTAKLQAHKKKYYMKRKPPVMSLQNT 81
Query: 137 TDKVKGKR 144
V+ ++
Sbjct: 82 LQSVQTEK 89
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 27.1 bits (57), Expect = 8.3
Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 11/122 (9%)
Query: 8 LDSGLGKLKREGKSAEVPKDSPEKRLKMDHNGIYNLDQVPAGLPGGLPLSVDYRSPVSHF 67
LD + K +E K E+ ++H P+ P G+P+ + S
Sbjct: 263 LDKVAAWIYEHSKPSETVKS--EQETAVEHPKPTATTSAPSASPTGVPVEEESHKATSDA 320
Query: 68 VPPAVELYAARHKQEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRT 127
VPP A K E + A A +R E T ++ +S T + A R T T
Sbjct: 321 VPP------AEAKPEPVPASAAERAPTSE---STTVPETIVASTTKVISEPAPRVTTAAT 371
Query: 128 PD 129
D
Sbjct: 372 AD 373
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.129 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,975,335
Number of Sequences: 5004
Number of extensions: 122926
Number of successful extensions: 504
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 423
Number of HSP's gapped (non-prelim): 90
length of query: 663
length of database: 2,362,478
effective HSP length: 77
effective length of query: 586
effective length of database: 1,977,170
effective search space: 1158621620
effective search space used: 1158621620
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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