Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001621-TA|BGIBMGA001621-PA|IPR007087|Zinc finger,
C2H2-type
(663 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 44 2e-04
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 43 7e-04
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 40 0.004
At2g22795.1 68415.m02704 expressed protein 37 0.049
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 36 0.086
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 36 0.086
At1g22310.1 68414.m02791 DNA-binding protein-related contains Pf... 36 0.086
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 36 0.11
At3g28770.1 68416.m03591 expressed protein 36 0.11
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 36 0.11
At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profi... 35 0.15
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 35 0.20
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 35 0.20
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 34 0.26
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 34 0.26
At5g16920.1 68418.m01983 expressed protein 34 0.35
At5g08430.1 68418.m00993 SWIB complex BAF60b domain-containing p... 34 0.35
At4g12620.1 68417.m01988 replication control protein, putative s... 34 0.35
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 34 0.35
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 34 0.35
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 33 0.46
At3g55580.1 68416.m06171 regulator of chromosome condensation (R... 33 0.46
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 33 0.46
At5g55660.1 68418.m06940 expressed protein similar to unknown pr... 33 0.80
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 33 0.80
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 33 0.80
At5g60030.1 68418.m07527 expressed protein 32 1.4
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 32 1.4
At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein ... 32 1.4
At1g19485.1 68414.m02427 AT hook motif-containing protein contai... 32 1.4
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 31 1.8
At5g41020.1 68418.m04986 myb family transcription factor contain... 31 1.8
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 31 1.8
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 31 1.8
At3g48710.1 68416.m05319 expressed protein putative protein - Ar... 31 1.8
At1g15200.1 68414.m01817 protein-protein interaction regulator f... 31 1.8
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 31 1.8
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 31 2.4
At5g15140.1 68418.m01774 aldose 1-epimerase family protein simil... 31 2.4
At5g07170.1 68418.m00817 hypothetical protein 31 2.4
At4g27380.1 68417.m03931 expressed protein 31 3.2
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 31 3.2
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 31 3.2
At3g15040.1 68416.m01903 expressed protein contains Pfam profile... 31 3.2
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 31 3.2
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 31 3.2
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 30 4.3
At5g48610.1 68418.m06012 expressed protein ; expression supporte... 30 4.3
At5g38690.1 68418.m04678 expressed protein 30 4.3
At4g39690.1 68417.m05616 expressed protein 30 4.3
At3g59800.1 68416.m06673 expressed protein 30 4.3
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 30 4.3
At3g13700.1 68416.m01731 RNA-binding protein, putative similar t... 30 4.3
At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein... 30 5.6
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 30 5.6
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 30 5.6
At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related... 30 5.6
At1g66500.1 68414.m07554 zinc finger (C2H2-type) family protein ... 30 5.6
At1g33770.1 68414.m04174 protein kinase family protein contains ... 30 5.6
At1g19270.1 68414.m02397 ubiquitin interaction motif-containing ... 30 5.6
At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein ... 30 5.6
At5g63740.1 68418.m08000 zinc finger protein-related 29 7.5
At5g43620.1 68418.m05332 S-locus protein-related contains some s... 29 7.5
At4g10010.1 68417.m01638 protein kinase family protein contains ... 29 7.5
At4g04030.1 68417.m00573 ovate family protein 65% similar to ova... 29 7.5
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 29 7.5
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 29 7.5
At1g23540.1 68414.m02960 protein kinase family protein contains ... 29 7.5
At1g05920.1 68414.m00621 hypothetical protein contains Pfam prof... 29 7.5
At5g62260.1 68418.m07817 AT hook motif-containing protein contai... 29 9.9
At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly id... 29 9.9
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 29 9.9
At4g39920.1 68417.m05654 tubulin folding cofactor C / Porcino (P... 29 9.9
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 29 9.9
At4g25210.1 68417.m03628 expressed protein weak similarity to st... 29 9.9
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 29 9.9
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 29 9.9
At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein ... 29 9.9
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 29 9.9
At2g21520.1 68415.m02561 SEC14 cytosolic factor, putative / phos... 29 9.9
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 29 9.9
At2g01650.1 68415.m00091 zinc finger (C2H2 type) family protein ... 29 9.9
At1g80810.1 68414.m09481 expressed protein similar to androgen-i... 29 9.9
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 29 9.9
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 29 9.9
At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase fami... 29 9.9
At1g44910.1 68414.m05146 FF domain-containing protein / WW domai... 29 9.9
At1g26300.1 68414.m03206 BSD domain-containing protein contains ... 29 9.9
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 44.4 bits (100), Expect = 2e-04
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 523 KAEAHRGSMTVRCEVC----RKCFEDDSELAAHDRTHTDDERAAMA-DLSRDDTAGR-CG 576
K A + C+ C K + + +H + ++ER A ++ + ++ C
Sbjct: 10 KTSAKKDIRNYLCQYCGISRSKNYLITKHIQSHHQMELEEERDDEACEVDEESSSNHTCQ 69
Query: 577 ECGATFQRYEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNHAKQLYRCVV 636
ECGA F++ L++H +H + C + L RHL H +L++C
Sbjct: 70 ECGAEFKKPAHLKQHMQ-SHSLERSFTCYV-DDCAASYRRKDHLNRHLLTHKGKLFKCPK 127
Query: 637 --CKASFARADQLAQHLNSHLANYKRLK 662
CK+ F+ + +H+ + +N R K
Sbjct: 128 ENCKSEFSVQGNVGRHVKKYHSNDNRDK 155
Score = 42.7 bits (96), Expect = 7e-04
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 509 CNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHDRTHTDDERAAMADLSR 568
C + F E L H H+ + CE+C + + H RTH DE ++ ++ +
Sbjct: 254 CMKYFTNEECLKSHIRSCHQH---INCEICGSKHLKKN-IKRHLRTH--DEDSSPGEI-K 306
Query: 569 DDTAGRCGECGATFQRYEQLRRHRSCAHGAAPDGMPHACA--QCGKRFSHAHSLTRHLHN 626
+ G C +TF + L++H H D P C CG RF++ H +H N
Sbjct: 307 CEVEG----CSSTFSKASNLQKHMKAVH---DDIRPFVCGFPGCGMRFAYKHVRNKH-EN 358
Query: 627 HAKQLYRC 634
+Y C
Sbjct: 359 SGYHVYTC 366
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 42.7 bits (96), Expect = 7e-04
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 17/128 (13%)
Query: 509 CNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHDRTHTDDERAAMADLSR 568
C + F E L H H+ + CE+C + + H RTH DE ++ ++ +
Sbjct: 166 CMKYFTNEECLKSHIRSCHQH---INCEICGSKHLKKN-IKRHLRTH--DEDSSPGEI-K 218
Query: 569 DDTAGRCGECGATFQRYEQLRRHRSCAHGAAPDGMPHACA--QCGKRFSHAHSLTRHLHN 626
+ G C +TF + L++H H D P C CG RF++ H +H N
Sbjct: 219 CEVEG----CSSTFSKASNLQKHMKAVH---DDIRPFVCGFPGCGMRFAYKHVRNKH-EN 270
Query: 627 HAKQLYRC 634
+Y C
Sbjct: 271 SGYHVYTC 278
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 610 CGKRFSHAHSLTRHLHNHAKQLYRCVV--CKASFARADQLAQHLNSHLANYKRLK 662
C + L RHL H +L++C CK+ F+ + +H+ + +N R K
Sbjct: 13 CAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDK 67
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 40.3 bits (90), Expect = 0.004
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 19/141 (13%)
Query: 535 CEVCRKCFEDDSELAAHDRTHTDD---ERAAMADLSRDDTAG--------RCGECGATF- 582
C++C K F+ D+ L H R H D+ A ++ S+D G C + G +
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGYSLKKHYYSCPQHGCRWN 278
Query: 583 QRYEQLRRHRS--CA---HGAAPDGMPHACAQCG-KRFSHAHSLTRHLHNHAKQLYRCVV 636
QR+E+ + +S CA + + + C +C K FS L H H +
Sbjct: 279 QRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTH-EKHCGDIKWVCS 337
Query: 637 CKASFARADQLAQHLNSHLAN 657
C F+R D+L H++ L +
Sbjct: 338 CGTKFSRKDKLMSHVSLFLGH 358
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 36.7 bits (81), Expect = 0.049
Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 81 QEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKV 140
QE + + K K+E + T S E + + ++K + T +S KE++ +D
Sbjct: 612 QEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEKKTDEDTSESSKENSVSDTE 671
Query: 141 KGKRGRPRKSEQVSANNK-QMPQAKIRVRSNL-MPDSSEPINLDSDEEPDLGNG 192
+ + + E+ + N + ++ Q + S+ +P + + D + PD GNG
Sbjct: 672 QKQSEETSEKEESNKNGETEVTQEQSDSSSDTNLPQEVKDVRTDLETLPDSGNG 725
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 35.9 bits (79), Expect = 0.086
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Query: 504 YECDCCNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHDRTHTDDERAAM 563
+ C C + FNRRE L EH ++ RC VC K + + H + +
Sbjct: 17 HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNV---PDHLSK 73
Query: 564 ADLSRDDTAGRCGECGATFQRYEQLRRHRSCAHGAAP 600
+ T C C F+ L H++ H + P
Sbjct: 74 GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPP 110
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 605 HACAQCGKRFSHAHSLTRH--LHNHAKQLYRCVVCKASFARADQLAQHLN 652
H C C K F+ L H + H+ RC VC + + +HLN
Sbjct: 17 HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLN 66
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 35.9 bits (79), Expect = 0.086
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Query: 504 YECDCCNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHDRTHTDDERAAM 563
+ C C + FNRRE L EH ++ RC VC K + + H + +
Sbjct: 17 HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLNV---PDHLSK 73
Query: 564 ADLSRDDTAGRCGECGATFQRYEQLRRHRSCAHGAAP 600
+ T C C F+ L H++ H + P
Sbjct: 74 GNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPP 110
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Query: 605 HACAQCGKRFSHAHSLTRH--LHNHAKQLYRCVVCKASFARADQLAQHLN 652
H C C K F+ L H + H+ RC VC + + +HLN
Sbjct: 17 HRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFESVREHLN 66
>At1g22310.1 68414.m02791 DNA-binding protein-related contains Pfam
profiles PF02178: AT hook motif, PF01429: Methyl-CpG
binding domain
Length = 425
Score = 35.9 bits (79), Expect = 0.086
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 118 KAKRKYTKRTPDSKKESNTT-DKVKGKRGRPRKSEQVSANNK 158
+ KRK TK SK T+ +K+K KRGRPRK S N+
Sbjct: 58 RVKRKKTKERKSSKITKGTSGNKIKRKRGRPRKIRNPSEENE 99
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 529 GSMTVRCEVCRKCFEDDSELAAHDRTHTDDERAAM---ADLSRDDTAGRCGECGATFQRY 585
G +C+ C + F L H +H + A+ DL ++ A T
Sbjct: 149 GYYVYQCKTCDRTFPSFQALGGHRASHKKPKAASFYSNLDLKKNTYANDAVSLVHTTTTV 208
Query: 586 EQLRRHRSCA-HGAAPDGMPHACAQCGKRFSHAHSLTRHLHNH 627
+ RS +G A H C CG F+ +L H+ H
Sbjct: 209 FKNNNSRSLVVYGKASKNKVHECGICGAEFTSGQALGGHMRRH 251
Score = 30.3 bits (65), Expect = 4.3
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 7/102 (6%)
Query: 504 YECDCCNETFNRREKLWEHKAEAHR---GSMTVRCEVCRKCFEDDSELAAHDRT----HT 556
Y+C C+ TF + L H+A + S ++ + + +D+ H T +
Sbjct: 153 YQCKTCDRTFPSFQALGGHRASHKKPKAASFYSNLDLKKNTYANDAVSLVHTTTTVFKNN 212
Query: 557 DDERAAMADLSRDDTAGRCGECGATFQRYEQLRRHRSCAHGA 598
+ + + + CG CGA F + L H GA
Sbjct: 213 NSRSLVVYGKASKNKVHECGICGAEFTSGQALGGHMRRHRGA 254
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 35.5 bits (78), Expect = 0.11
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 80 KQEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKES-NTTD 138
K++ Q D+ + KE + D +GE + K + + + K++ NT+
Sbjct: 878 KKKREEVQRNDKSSTKEVRDFANNMDIDVQKGSGESVKYKKDEKKEGNKEENKDTINTSS 937
Query: 139 KVKGKRGRPRKSEQVSANNKQMPQAK 164
K KGK + +K E ++N K+ + K
Sbjct: 938 KQKGKDKKKKKKESKNSNMKKKEEDK 963
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 129 DSKKESNTTDKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINL-DSDEEP 187
+SK+++ + +VK G K E+ NNK + K DS + ++ D EE
Sbjct: 674 ESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSMEDKKLENKESQTDSKDDKSVDDKQEEA 733
Query: 188 DLGNGSVKDLDSRVE 202
+ G KD D VE
Sbjct: 734 QIYGGESKD-DKSVE 747
Score = 32.3 bits (70), Expect = 1.1
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 15/146 (10%)
Query: 91 RKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKS 150
R +++ K++T A++ T E K K D KK NTT++ GK+ +S
Sbjct: 1428 RNNEEDRKKQTSVAENKKQKETKEEKNKPK--------DDKK--NTTEQSGGKK-ESMES 1476
Query: 151 EQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPDLGNGSVKDLD-SRVEKLEXXXX 209
E A N+Q QA + S+ +S I + +D + D S D D S+ E L
Sbjct: 1477 ESKEAENQQKSQATTQGESD---ESKNEILMQADSQADTHANSQGDSDESKNEILMQADS 1533
Query: 210 XXXXXXXXXXXKSRSVLESSPKWTSQ 235
K+ ++++ + SQ
Sbjct: 1534 QADSQTDSDESKNEILMQADSQADSQ 1559
Score = 31.5 bits (68), Expect = 1.8
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 4/97 (4%)
Query: 91 RKAKKEHKRRTGGADSATSSATGELI--PKAKRKYTKRTPDSKKESNTTDKVKGKRGRPR 148
R +++ K++T A++ T E PK +K T + KKES ++ + + +
Sbjct: 1317 RNNEEDRKKQTSVAENKKQKETKEEKNKPKDDKKNTTKQSGGKKESMESESKEAEN--QQ 1374
Query: 149 KSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDE 185
KS+ + + + +I ++++ DS DSDE
Sbjct: 1375 KSQATTQADSDESKNEILMQADSQADSHSDSQADSDE 1411
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 90 DRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSK-KESNTTDKVKGKRGRPR 148
D+K KKE++ ++ + +S + + K ++K +K K KE +++ K K+
Sbjct: 1152 DKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEED 1211
Query: 149 KSEQVSA-NNKQMPQAK 164
+ +Q S NK+ + K
Sbjct: 1212 RKKQTSVEENKKQKETK 1228
Score = 30.3 bits (65), Expect = 4.3
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 80 KQEAMHAQALDRKAKK---EHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNT 136
K+E ++ ++K KK + K++T ++ T +K + D KK NT
Sbjct: 1192 KKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKET--------KKEKNKPKDDKK--NT 1241
Query: 137 TDKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPDLGNGSVKD 196
T + GK+ +SE A N+Q QA + S+ +S I + +D + D + S D
Sbjct: 1242 TKQSGGKK-ESMESESKEAENQQKSQATTQADSD---ESKNEILMQADSQADSHSDSQAD 1297
Query: 197 LD 198
D
Sbjct: 1298 SD 1299
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 35.5 bits (78), Expect = 0.11
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 16/78 (20%)
Query: 535 CEVCRKCFEDDSELAAHDRTHTD---------------DERAAMADLSRDDTAGRCGECG 579
C+ C K F L H R HT+ D+R MA + C ECG
Sbjct: 11 CKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMAQKHKQQQQVGCRECG 70
Query: 580 ATFQRYEQLRRHRSCAHG 597
F + LR H +C HG
Sbjct: 71 RVFVSLKALRGHMAC-HG 87
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 514 NRREKLWEHK---AEAHRGSMTVRCEVCRKCFEDDSELAAHDRTHTDDERAAMADLSRDD 570
N++++L + + A+ H+ V C C + F L H H + ++ M D S+ D
Sbjct: 42 NKKKRLVDQRKMMAQKHKQQQQVGCRECGRVFVSLKALRGHMACHGEVKKMLMDDNSQSD 101
Query: 571 T 571
T
Sbjct: 102 T 102
>At3g18610.1 68416.m02365 nucleolin, putative contains Pfam profile:
PF00076 RNA recognition motif
Length = 636
Score = 35.1 bits (77), Expect = 0.15
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 105 DSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQVSANNKQMPQAK 164
DS+ S++ E P K+K T D+K ES+++++ P +++ + P AK
Sbjct: 236 DSSDESSSDEETPVVKKKPTTVVKDAKAESSSSEEESSSDDEPTPAKKPTVVKNAKPAAK 295
Query: 165 IRVRSNLMPDSSEPINLDSDEEPDLGNGSVKDLDSRVE 202
S D E DE+P V S+ E
Sbjct: 296 DSSSSEEDSDEEE----SDDEKPPTKKAKVSSKTSKQE 329
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 34.7 bits (76), Expect = 0.20
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 91 RKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKS 150
+K KK++K+R G D A E PK K+K K+ ++ D+V + P+K
Sbjct: 61 KKKKKKNKKR-GDTDDGEDEAVAEEEPKKKKKKNKKLQQRGDTNDEEDEVIAEEEEPKKK 119
Query: 151 EQ 152
++
Sbjct: 120 KK 121
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 34.7 bits (76), Expect = 0.20
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 14/107 (13%)
Query: 552 DRTHTDDERAAMADLSRDDTAGR--CGECGATFQRYEQLRRHRSCAHGAAPDGMPHACAQ 609
+ T++E ++R T GR C CG F+ Y+ L HR+ H +
Sbjct: 150 EEIETEEESEGYNKINRATTKGRYKCETCGKVFKSYQALGGHRA----------SHKKNR 199
Query: 610 CGKRFSHAHSLTRH--LHNHAKQLYRCVVCKASFARADQLAQHLNSH 654
+ S T + + AK+++ C +C FA L H SH
Sbjct: 200 VSNNKTEQRSETEYDNVVVVAKRIHECPICLRVFASGQALGGHKRSH 246
Score = 30.3 bits (65), Expect = 4.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 632 YRCVVCKASFARADQLAQHLNSHLAN 657
Y+C VC SF L H+ SH++N
Sbjct: 4 YKCRVCFKSFVNGKALGGHMRSHMSN 29
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 34.3 bits (75), Expect = 0.26
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 14/175 (8%)
Query: 82 EAMHAQALDRKAKKEHKRRTGGADSATSSATGELIP-----KAKRKYTKR--TPDSK-KE 133
EA+ D+K KK + + + T +I K K+K TK T + K KE
Sbjct: 83 EAVENVKKDKKKKKNKETKVEVTEEEKVKETDAVIEDGVKEKKKKKETKVKVTEEEKVKE 142
Query: 134 SNTT--DKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPD--L 189
++ D VK K+ + KS+ V A++ + +K R RS P+ ++ D DEE
Sbjct: 143 TDAVIEDGVKEKKKKKSKSKSVEADDDKEKVSKKRKRSE--PEETKEETEDDDEESKRRK 200
Query: 190 GNGSVKDLDSRVEKLEXXXXXXXXXXXXXXXKSRSVLESSPKWTSQVYTPQVPLK 244
+V + D V++ +++S + S K S P+ P +
Sbjct: 201 KEENVVENDEGVQETPVKETETKENGNAEKSETKSTNQKSGKGLSNSKEPKKPFQ 255
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 34.3 bits (75), Expect = 0.26
Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 91 RKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTP---DSKKESNTTDKVKGKRG-R 146
+K +K +R+GG D ++S ++G+ + +++Y K+ DS+ +S++ + K+G R
Sbjct: 822 KKREKSPGKRSGGNDLSSSESSGD--ERRRKRYNKKDRHRNDSESDSSSDYHSRDKQGSR 879
Query: 147 PRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEE 186
R + S+ K+ K SS + D +++
Sbjct: 880 SRSKRRESSREKRSSHKKHSKHRRTKKSSSSRYSSDEEQK 919
>At5g16920.1 68418.m01983 expressed protein
Length = 256
Score = 33.9 bits (74), Expect = 0.35
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 420 PMAHNEDDSGPASDSDTDPERAAD----VPPPQENDVSESENESP 460
P +HN D ++SD + R AD PPP + +S+ +++SP
Sbjct: 187 PSSHNNSDQNSHNNSDQNSSRPADHTLTAPPPVSSPISQPKSDSP 231
>At5g08430.1 68418.m00993 SWIB complex BAF60b domain-containing
protein / plus-3 domain-containing protein / GYF
domain-containing protein similar to CPRF interacting
protein [Petroselinum crispum] GI:9588690; contains Pfam
profiles PF02201: BAF60b domain of the SWIB complex,
PF03126: Plus-3 domain, PF02213: GYF domain; contains
non-conensus AT-AC splice sites at intron 5
Length = 553
Score = 33.9 bits (74), Expect = 0.35
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 147 PRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPDLGNGSVKDLDSRVE 202
P + +VS +P + S + P+ SE I L D+E D G+G + LD +VE
Sbjct: 433 PTEESKVSQLQSSIPVNNVDNGSQVQPNPSEVIELSDDDEDDNGDG--ETLDPKVE 486
>At4g12620.1 68417.m01988 replication control protein, putative
similar to origin recognition complex subunit 1
(Replication control protein 1)[Homo sapiens]
SWISS-PROT:Q13415
Length = 813
Score = 33.9 bits (74), Expect = 0.35
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Query: 94 KKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQV 153
K+E R D S + PK K+K TP S S T K K K ++V
Sbjct: 78 KRERAPRKPTTDVVPSKSKKTETPKKKKKIDSFTPVSPIRSETIKKTK-------KKKRV 130
Query: 154 SANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPDL 189
N + + + + ++ E N D +E+P++
Sbjct: 131 YYNKVEFDETEFEIGDDVYVKRREDSNSDEEEDPEI 166
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 33.9 bits (74), Expect = 0.35
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 504 YECDCCNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHD--RTHTDDERA 561
YEC CN TF+ + L H+A +H+ T E R A+ + +H +
Sbjct: 113 YECKTCNRTFSSFQALGGHRA-SHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGS 171
Query: 562 AMAD-----LSRDDTAGRCGECGATFQRYEQL----RRHRSCAHGAAP 600
A+A +++ + C CG+ F + L RRHR+ +P
Sbjct: 172 ALASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHRTAVTTISP 219
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 33.9 bits (74), Expect = 0.35
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 410 EDERPKEEQP-PMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDKS 463
EDE+P ++ P A S +SD D+D E + P ++ D S+ S D+S
Sbjct: 196 EDEKPATKKAAPAAAKAASSSDSSDEDSDEESEDEKPAQKKADTKASKKSSSDES 250
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 33.5 bits (73), Expect = 0.46
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Query: 534 RCEVCRKCFEDDSELAAHDRTHTDDERAAMADLSRDDTAGR---CGECGATFQRYEQLRR 590
+C VC K F L H +H D S TA + C CG +F + L
Sbjct: 76 KCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALGG 135
Query: 591 HRSC 594
H+ C
Sbjct: 136 HKRC 139
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 11/65 (16%)
Query: 574 RCGECGATFQRYEQL----RRHRSCAHGAAPD-GMP------HACAQCGKRFSHAHSLTR 622
+CG C TF Y+ L HRS G D P H C+ CGK F+ +L
Sbjct: 76 KCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALGG 135
Query: 623 HLHNH 627
H H
Sbjct: 136 HKRCH 140
>At3g55580.1 68416.m06171 regulator of chromosome condensation
(RCC1) family protein UVB-resistance protein UVR8,
Arabidopsis thaliana, EMBL:AF130441; contains Pfam
PF00415: Regulator of chromosome condensation (RCC1)
domain
Length = 488
Score = 33.5 bits (73), Expect = 0.46
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 10 SGLGKLKREGKSAEV-PKDSPEKRLKMDHNGIYNLDQVPAGLPGGLPLSVDYRSPVSHFV 68
+G GKL+ G SA PK+ E+ + +Y +P P PL SPV +
Sbjct: 2 NGEGKLETGGTSAAATPKEEKEEEEVVSQRVVYMWGYLPGASPQRSPLM----SPVEVKI 57
Query: 69 PPAVE 73
PPAVE
Sbjct: 58 PPAVE 62
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Query: 226 LESSPKWTSQVYTPQVPLKWTLKCTLQVYTPTAPLKWTPKFTPQVYTPRVPLKCTPQE-- 283
++ P ++ +Y P + T + +Y P TP ++P +Y P + TP
Sbjct: 72 IQKPPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSP 131
Query: 284 --YPSSVQPKMTP 294
YP +Q TP
Sbjct: 132 PIYPPPIQKPPTP 144
Score = 31.9 bits (69), Expect = 1.4
Identities = 26/129 (20%), Positives = 44/129 (34%), Gaps = 1/129 (0%)
Query: 229 SPKWTSQVYTPQVPLKWTLKCTLQVYTPTAPLKWTPKFTPQVYTPRVPLKCTPQEYPSSV 288
+P ++ +Y P + T + +Y P TP ++P +Y P + TP P
Sbjct: 92 TPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPSYSPPVK 151
Query: 289 QPKMTPQEYXXXXXXXXXXXXXXXXXXKWTPKLPLQVYASRVPLKCTPQEYPSSVHPKMT 348
P + ++P + V+ P+ P + P VH T
Sbjct: 152 PPPVQMPPTPTYSPPIKPPPVHKPPTPTYSPPIKPPVHKPPTPIYSPPIK-PPPVHKPPT 210
Query: 349 PEEYPSSGP 357
P P P
Sbjct: 211 PIYSPPIKP 219
>At5g55660.1 68418.m06940 expressed protein similar to unknown
protein (pir||T08929)
Length = 778
Score = 32.7 bits (71), Expect = 0.80
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 411 DERPKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDKS 463
+E + + +AH++D+S + D + E+ +V E + E+EN PDKS
Sbjct: 512 EEATRTNKKSVAHSDDESEEEKEDDEEEEKEQEV----EEEEEENENGIPDKS 560
Score = 31.1 bits (67), Expect = 2.4
Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 90 DRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRK 149
+ ++++E K++ G S TSS E K++ K T S T K G+ +K
Sbjct: 577 EEESEEETKKKKRG--SRTSSDKKESAGKSRSKKTAVPTKSSPPKKATQKRSA--GKRKK 632
Query: 150 SEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPDLGNGSVKDLDSRVE 202
S+ S + + + + ++ P+ S E+P +G K D E
Sbjct: 633 SDDDSDTSPKASSKRKKTEKPAKEQAAAPLKSVSKEKPVIGKRGGKGKDKNKE 685
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 32.7 bits (71), Expect = 0.80
Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 3/119 (2%)
Query: 90 DRKAKKEHKRRTGGADSATSSATGELIP---KAKRKYTKRTPDSKKESNTTDKVKGKRGR 146
+RK KK ++ GG T E K K+ +K+ D ++E+ K+ R
Sbjct: 731 ERKRKKSESKKEGGEGEETQKEANESTKKERKRKKSESKKQSDGEEETQKEPSESTKKER 790
Query: 147 PRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPDLGNGSVKDLDSRVEKLE 205
RK+ + + + + + R S +E ++ N + K + +K E
Sbjct: 791 KRKNPESKKKAEAVEEEETRKESVESTKKERKRKKPKHDEEEVPNETEKPEKKKKKKRE 849
Score = 32.3 bits (70), Expect = 1.1
Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Query: 80 KQEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTP---------DS 130
++EA + +RK KK ++ + T E K +++ + ++
Sbjct: 750 QKEANESTKKERKRKKSESKKQSDGEEETQKEPSESTKKERKRKNPESKKKAEAVEEEET 809
Query: 131 KKESNTTDKVKGKRGRPRKSEQVSANNKQMPQAK 164
+KES + K + KR +P+ E+ N + P+ K
Sbjct: 810 RKESVESTKKERKRKKPKHDEEEVPNETEKPEKK 843
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.7 bits (71), Expect = 0.80
Identities = 34/140 (24%), Positives = 53/140 (37%), Gaps = 25/140 (17%)
Query: 504 YECDCCNETFNR----REKLWEHKAEAHRGSMTVRCEV---------CRKCFEDDSELAA 550
+ C C++TFNR + +W H +E +G+ +++ + C C E
Sbjct: 180 FACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNIN 239
Query: 551 HDRTH-TDDERAAMADLSRDDTAG--RCGECGATFQRYEQLRRH-RSCAHGAAPDGMPHA 606
H R+ D R R + CG+CG R H ++C G
Sbjct: 240 HPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNC-------GKLWY 292
Query: 607 CAQCGKRFSHAHSLTRHLHN 626
C CG F H SL H+ +
Sbjct: 293 CT-CGSDFKHKRSLKDHIRS 311
>At5g60030.1 68418.m07527 expressed protein
Length = 292
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 118 KAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQVSANN 157
+ K TK++ D+K E N D+ G++ R R SE VS +
Sbjct: 70 ETKSTETKQSSDAKSERNVIDEFDGRKIRYRNSEAVSVES 109
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 31.9 bits (69), Expect = 1.4
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Query: 256 PTAPLKWTPKFTPQVYTPRVPLKCTPQEYPSSVQPKMTPQEYXXXXXXXXXXXXXXXXXX 315
P P+K+ P P+ Y P + P++YP ++ P++Y
Sbjct: 95 PHPPVKYPP---PEQYPPPIKKYPPPEQYPPPIKKYPPPEQYSPPFKKYPPPEQYPPPIK 151
Query: 316 KWTPKLPLQVYASRVPLKCTPQE-YPSSVHPKMTPEEYP 353
K+ P + Y + K PQE YP + PE+YP
Sbjct: 152 KYPPP---EHYPPPIK-KYPPQEQYPPPIKKYPPPEKYP 186
>At2g36480.1 68415.m04477 zinc finger (C2H2-type) family protein
weak similarity to S-locus protein 4 (GI:6069478)
[Brassica rapa]; weak similarity to Pre-mRNA cleavage
complex II protein Pcf11 (Fragment) (Swiss-Prot:O94913)
[Homo sapiens]; contains Prosite PS00028: Zinc finger,
C2H2 type, domain
Length = 828
Score = 31.9 bits (69), Expect = 1.4
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 584 RYEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNHAKQ 630
R +++R + D +PH C C R L RH+ H K+
Sbjct: 658 RADKIRELHPSVISSLFDDLPHLCTSCSVRLKQKEELDRHMELHDKK 704
>At1g19485.1 68414.m02427 AT hook motif-containing protein contains
Pfam profile: PF00730 HhH-GPD superfamily base excision
DNA repair protein; contains Pfam PF02178: AT hook
motif; contains Pfam PF00400: WD domain, G-beta repeat
(5 copies); contains Prosite PS00354: HMG-I and HMG-Y
DNA-binding domain (A+T-hook)
Length = 815
Score = 31.9 bits (69), Expect = 1.4
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 112 TGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNL 171
+G++ K K+ K E+ T + K RGRPRK V + P+ + R +S
Sbjct: 180 SGQVSDKGKKLTGKSRKQPSGETTETTEPKKPRGRPRK-HPVETTEPKKPRGRPRKKST- 237
Query: 172 MPDSSEPINLDSD 184
+ P+ LD D
Sbjct: 238 ---AELPVELDDD 247
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 31.5 bits (68), Expect = 1.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Query: 616 HAHSLTRHLHNHAKQLYRCVVCKASFARADQLAQHLNSH 654
H + + + +++Y C CK F A L H+N H
Sbjct: 19 HRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIH 57
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 31.5 bits (68), Expect = 1.8
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 2/111 (1%)
Query: 78 RHKQEAMHAQALDRKAKKEHKRRTGGA--DSATSSATGELIPKAKRKYTKRTPDSKKESN 135
R K+ ++A D +K+ K ++ DS K+K++ ++ + S
Sbjct: 99 RSKETKADSEAEDDGVEKKSKEKSKETKVDSEAHDGVKRKKKKSKKESGGDVIENTESSK 158
Query: 136 TTDKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEE 186
+DK KGKR R N + + K + + E INLDS +
Sbjct: 159 VSDKKKGKRKRDDTDLGAEENIDKEVKRKNNKKKPSVDSDVEDINLDSTND 209
Score = 29.9 bits (64), Expect = 5.6
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 89 LDRKAKKEHKRRTGGADSATSSATGELIP--KAKRKYTKRTPDSKKESNTTDKVKGKRGR 146
+D++ K+++ ++ DS + K KRK K++ DS+ E N + K + R
Sbjct: 180 IDKEVKRKNNKKKPSVDSDVEDINLDSTNDGKKKRKKKKQSEDSETEENGLNSTKDAKKR 239
Query: 147 PRKSEQ 152
+K ++
Sbjct: 240 RKKKKK 245
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 413 RPKEEQPPM-AHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDK 462
+P EE+P +E D S+ D D E+ DV +D E ++E ++
Sbjct: 63 KPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDEEE 113
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 413 RPKEEQPPM-AHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDK 462
+P EE+P +E D S+ D D E+ DV +D E ++E ++
Sbjct: 146 KPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDEDDSDDDEEEDSEDEEE 196
>At3g48710.1 68416.m05319 expressed protein putative protein -
Arabidopsis thaliana, EMBL:AL078465.1
Length = 462
Score = 31.5 bits (68), Expect = 1.8
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 415 KEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDK 462
K+EQP +S S+ D DV P +EN+ SE +K
Sbjct: 243 KQEQPTETEGNGESDVGSEGTNDSNGEDDVAPEEENNKSEDTETEDEK 290
>At1g15200.1 68414.m01817 protein-protein interaction regulator
family protein contains Pfam PF04696: pinin/SDK/memA/
protein conserved region
Length = 423
Score = 31.5 bits (68), Expect = 1.8
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 134 SNTTDKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPDLGNGS 193
SN + +G+RG PR +E+ ++ P AK R+ S ++ E ++ D E P GNG+
Sbjct: 43 SNVAPRNQGRRGFPRPAERNDVEDE--PPAKRRLSSAVVKVDGEDVSKDG-EFPVDGNGT 99
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 31.5 bits (68), Expect = 1.8
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 504 YECDCCNETFNRREKLWEHKAEAHR-----GSMTVRCEVCRKCFEDDSELAAHDRTHTDD 558
++C C + F + L H+A + S E + EDD + + D+
Sbjct: 150 FQCKACKKVFTSHQALGGHRASHKKVKGCFASQDKEEEEEEEYKEDDDDNDEDEDEEEDE 209
Query: 559 ERAAMADLSRD-DTAGRCGECGATFQRYEQLRRHRSCAHGAAP 600
E + A ++R A C C F + L H+ C H P
Sbjct: 210 EDKSTAHIARKRSNAHECTICHRVFSSGQALGGHKRC-HWLTP 251
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 3/97 (3%)
Query: 534 RCEVCRKCFEDDSELAAHDRTHTDDERAAMADLSRDDTAGRCGEC---GATFQRYEQLRR 590
+C+ C+K F L H +H + + ++ E + E+
Sbjct: 151 QCKACKKVFTSHQALGGHRASHKKVKGCFASQDKEEEEEEEYKEDDDDNDEDEDEEEDEE 210
Query: 591 HRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNH 627
+S AH A H C C + FS +L H H
Sbjct: 211 DKSTAHIARKRSNAHECTICHRVFSSGQALGGHKRCH 247
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/94 (20%), Positives = 35/94 (37%), Gaps = 5/94 (5%)
Query: 534 RCEVCRKCFEDDSELAAHDRTHTDDERAAMADLSRDDTAGRCGECGATFQRYEQLRRHRS 593
+C VC K F L H +H ++ +++ + G+ + +
Sbjct: 98 KCTVCGKSFSSYQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVV-----INVTVN 152
Query: 594 CAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNH 627
+G + G H C+ C K F+ +L H H
Sbjct: 153 TGNGVSQSGKIHTCSICFKSFASGQALGGHKRCH 186
>At5g15140.1 68418.m01774 aldose 1-epimerase family protein similar
to SP|P05149 Aldose 1-epimerase precursor (EC 5.1.3.3)
(Mutarotase) from Acinetobacter calcoaceticus; contains
Pfam profile PF01263 Aldose 1-epimerase
Length = 490
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 410 EDERPKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENE 458
+DE+ +++ HN+DD SD DTD + D +++V +NE
Sbjct: 111 DDEKKHKDKKKDGHNDDDD---SDDDTDDDDDDDDDDDDDDEVDGDDNE 156
>At5g07170.1 68418.m00817 hypothetical protein
Length = 542
Score = 31.1 bits (67), Expect = 2.4
Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 4/106 (3%)
Query: 82 EAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVK 141
+A H + R ++ + D + S T + + K K + + SN+ +V
Sbjct: 419 QAFHLRTSLRARERSSSAKIAPTDDSKHSLTSKSVGSMKGMKVK----ASRSSNSNCQVY 474
Query: 142 GKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEP 187
G + P S+ + ++K I+ +NL+ + P+N + +EP
Sbjct: 475 GPKICPLDSKVMQTSSKCGEAIDIKHENNLLREFEAPMNTNFRDEP 520
>At4g27380.1 68417.m03931 expressed protein
Length = 156
Score = 30.7 bits (66), Expect = 3.2
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Query: 89 LDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPR 148
+ +K K+++ D + S + E P+ T T D K S + ++G+P
Sbjct: 1 MTKKRNKKNRDEEASMDVSESQSVSEATPQVMD--TTETGDGKLASRARSLMSTRKGKPM 58
Query: 149 KSEQVSANNKQMPQA 163
K +++ N K + A
Sbjct: 59 KRTKIAMNMKAVAVA 73
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 255 TPTAPLKWTPKFTPQVYTPRVPLKCTPQEYPSSVQPKMTP 294
+P+ P P TP V TP VP P P+ V P TP
Sbjct: 51 SPSIPSPSVP--TPSVPTPSVPTPSVPSPNPTPVTPPRTP 88
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 30.7 bits (66), Expect = 3.2
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 610 CGKRFSHAHSLTRHLHNHAKQLYRC--VVCKASFARADQLAQHLNSH 654
CGK F +L +H H H ++ Y C C F + +L +H H
Sbjct: 86 CGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLIH 132
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 504 YECDC--CNETFNRREKLWEHKAEAHRGSMTVRC--EVCRKCFEDDSELAAHDRTHTDD 558
Y CD C + F KL H H G C E C K F D L +H +TH+ +
Sbjct: 108 YVCDQEGCGKKFLDSSKLKRHYL-IHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQE 165
>At3g15040.1 68416.m01903 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 243
Score = 30.7 bits (66), Expect = 3.2
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Query: 21 SAEVPKDSPEKRLKMDHNGIYNLDQVPAGLPGGLPLSVDYRSPVSHFVPPAVELYAARHK 80
S+ + +P ++L+ +G+ N++ +G+ LP S S +SH HK
Sbjct: 49 SSPAKQQTPARQLQRSKSGLKNVEA--SGILAALPESSGSSSYLSHVF---------HHK 97
Query: 81 QEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDS 130
A + ++ A +GG SA SS++ IP A + +R P S
Sbjct: 98 PAAALSTSVSSTASSSSS--SGGGASAGSSSSARAIPTAPKPPQERLPFS 145
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 30.7 bits (66), Expect = 3.2
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 535 CEVCRKCFEDDSELAAHDRTHTDDER--AAMADLSRDDTAGR----CGECGATFQRYEQL 588
C +C K F+ D+ L H R H D+ + AA+A +++ G F ++
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRN 305
Query: 589 RRHRS--------CA---HGAAPDGMPHACAQC-GKRFSHAHSLTRHLHNHAKQLYRCVV 636
+ H+ C + C++C K+FS L H + K + C
Sbjct: 306 KEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLC-S 364
Query: 637 CKASFARADQLAQHL 651
C +F+R D+L H+
Sbjct: 365 CGTTFSRKDKLFGHI 379
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 30.7 bits (66), Expect = 3.2
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 19/135 (14%)
Query: 535 CEVCRKCFEDDSELAAHDRTHTDDER--AAMADLSRDDTAGR----CGECGATFQRYEQL 588
C +C K F+ D+ L H R H D+ + AA+A +++ G F ++
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRN 305
Query: 589 RRHRS--------CA---HGAAPDGMPHACAQC-GKRFSHAHSLTRHLHNHAKQLYRCVV 636
+ H+ C + C++C K+FS L H + K + C
Sbjct: 306 KEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEKHCGKNKWLC-S 364
Query: 637 CKASFARADQLAQHL 651
C +F+R D+L H+
Sbjct: 365 CGTTFSRKDKLFGHI 379
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 535 CEVCRKCFEDDSELAAHDRTHTDD--ERAAMADLSRDDTAGRCGECGATFQR 584
C+VC+K F + L H R HT ++ + S + C GA+F+R
Sbjct: 11 CQVCKKSFSNGKALGGHMRAHTLKFFPGSSSSTGSITPSLRSCNNLGASFRR 62
>At5g48610.1 68418.m06012 expressed protein ; expression supported
by MPSS
Length = 470
Score = 30.3 bits (65), Expect = 4.3
Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 83 AMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKG 142
A H +A E++ + +SA S E + K+++ R + K++ DK +
Sbjct: 179 ADHKRAEVMGKPMENRDQVRQTESAEKSHRKENVTKSEKP---RDQEGVKKTEAKDKDRN 235
Query: 143 KRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPDLGNGSVKDL 197
K + K+E ++ ++ P K+ L + +L + + PD+ S+K+L
Sbjct: 236 KEKKEEKTESINKTRQEKP--KLIRGPKLEEREKDSPDLRNCKLPDVSRTSIKNL 288
>At5g38690.1 68418.m04678 expressed protein
Length = 572
Score = 30.3 bits (65), Expect = 4.3
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 94 KKEHKRRTGGADSATSSATGELIPK--AKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSE 151
KK + ++ +DS AT E+I K A+ K K T KE+N +K+K + +K E
Sbjct: 189 KKSNPKKIKLSDSV--HATTEVIKKVLAEGKKKKTTAKGIKENNVAEKIKRIKPALKKKE 246
Query: 152 QVSANNKQMPQAKIRV 167
+ K +PQ I +
Sbjct: 247 EDQVEIK-IPQGNISI 261
>At4g39690.1 68417.m05616 expressed protein
Length = 650
Score = 30.3 bits (65), Expect = 4.3
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 410 EDERPKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDKS 463
E + E QP + H+E G SD + PE +D+ + +S ++ E+P ++
Sbjct: 136 EKDGKVETQPQVTHSEASEGVQSDIELQPE--SDLSSDRFTYISSNQEETPQET 187
>At3g59800.1 68416.m06673 expressed protein
Length = 186
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 94 KKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTDKVKGK 143
KK+ K+R + S +SS++ E + R +KR+ KK ++ DK K
Sbjct: 117 KKKSKKRKHYSSSESSSSSDEDESRRSRSSSKRSKKEKKHKSSRDKHSSK 166
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/47 (29%), Positives = 19/47 (40%)
Query: 505 ECDCCNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAH 551
+C C FN+ E L EH ++ C VC+K L H
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEPTCGVCKKHCRSFESLREH 62
>At3g13700.1 68416.m01731 RNA-binding protein, putative similar to
mec-8 [Caenorhabditis elegans] GI:1370048; contains Pfam
profile:PF00076 rrm:RNA recognition motif
Length = 296
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 411 DERPKEEQPPMAHNEDDSGPASDSDTDP-ERAADVPPPQENDVSESENES-PD 461
D R KE ++ ++DD DSD D + + P+END ++SE +S PD
Sbjct: 151 DNRNKE----ISKSQDDQSDEGDSDPDEVQEPGNSDSPKENDTTKSEADSEPD 199
>At5g49400.1 68418.m06113 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 275
Score = 29.9 bits (64), Expect = 5.6
Identities = 22/110 (20%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 80 KQEAMHAQA-LDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTD 138
+ +A + +A +++++KK ++ +DS + S + + +S E +++
Sbjct: 154 RPDATNGKAEVEKRSKKSKRKHRSKSDSESDSEASVFETDSDGS----SGESSSEYSSSS 209
Query: 139 KVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPD 188
+ +R R RK+++ KQ + + R S+ S DSD + D
Sbjct: 210 DSEDERRRRRKAKKSKKKQKQRKERRRRYSSSSSESSESESASDSDSDED 259
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 29.9 bits (64), Expect = 5.6
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 130 SKKESNTTDKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINLDSDEEPDL 189
+++E + D+ + K + KSE+ NN+ K + +SN D E + +E +
Sbjct: 288 AEEEQSKEDRKRKKSSKRNKSEEEEVNNEDHKSKKKKSKSNTNVDQVETKKKEEHKEKTI 347
Query: 190 GNGSVKDLDS 199
+ + D D+
Sbjct: 348 PSNNDDDDDA 357
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 29.9 bits (64), Expect = 5.6
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 252 QVYTPTAPLKWTPKFT---PQVYTPRVPLKCTPQEYPSSVQPKMTP 294
+V TP+ P + P + P V TP VP P P+ V P TP
Sbjct: 48 KVPTPSVPSPYVPTPSVPSPSVPTPSVPSPSVPSPNPTPVIPPRTP 93
>At4g00610.1 68417.m00085 DNA-binding storekeeper protein-related
similar to storekeeper protein GI:14268476 [Solanum
tuberosum]
Length = 328
Score = 29.9 bits (64), Expect = 5.6
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 415 KEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDK 462
+EE P + +E S SD++ +P A P N+ +SE + ++
Sbjct: 87 EEEDEPSSDSESGSESESDTEAEPMTLAAAAPSSSNEKRQSEGKPEEE 134
>At1g66500.1 68414.m07554 zinc finger (C2H2-type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type,
domain; similar to S-locus protein 4 (GI:6069478)
[Brassica rapa]; similar to Pre-mRNA cleavage complex II
protein Pcf11 (Fragment) (Swiss-Prot:O94913) [Homo
sapiens]
Length = 416
Score = 29.9 bits (64), Expect = 5.6
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 579 GATFQRYEQLR-RHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNHAKQ 630
G +F L RH S D MP C+ CG RF ++H+ H ++
Sbjct: 228 GLSFDNPSSLNVRHESVIKSLYSD-MPRQCSSCGLRFKCQEEHSKHMDWHVRK 279
>At1g33770.1 68414.m04174 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 614
Score = 29.9 bits (64), Expect = 5.6
Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 69 PPAVELYAARHKQEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTP 128
PP+ EL A +EA +A K + R G DS T E I + TP
Sbjct: 441 PPSKELDAKVRDEEAKRKKAEAVKWRGHESVRRGLRDS---KVTPEFIASGNSNVSLTTP 497
Query: 129 DSKKESNTTD 138
KKE TD
Sbjct: 498 SFKKEKRFTD 507
>At1g19270.1 68414.m02397 ubiquitin interaction motif-containing
protein / LIM domain-containing protein weak similarity
to LIM-homeobox protein [Mus musculus] GI:2149584, Hic-5
[Mus musculus] GI:664955; contains Pfam profiles
PF02809: Ubiquitin interaction motif, PF00412: LIM
domain
Length = 532
Score = 29.9 bits (64), Expect = 5.6
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 416 EEQPPMAHNEDDSGPASDSDTD-PERAADVPPPQENDVSESENESPDKS 463
+ P +H+++ S +D+D D P + ++N ++ ENE D++
Sbjct: 29 DNYPTASHDDEPSAADTDADNDEPHHTQEPSTSEDNTSNDQENEDIDRA 77
>At1g10480.1 68414.m01180 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 211
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 605 HACAQCGKRFSHAHSLTRHLHNHAKQLYRCVVCKASFARADQLAQHLNSH 654
H C CGK F+++ +L H + H K+ + + AR + +L +H
Sbjct: 60 HECQYCGKEFANSQALGGHQNAHKKERLKKKRLQLQ-ARRASIGYYLTNH 108
>At5g63740.1 68418.m08000 zinc finger protein-related
Length = 226
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/58 (22%), Positives = 25/58 (43%)
Query: 410 EDERPKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDKSFQCH 467
EDE ++ ++DD+ A D + D + D ++D + +E D + H
Sbjct: 85 EDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDDENDEECDDEYDSH 142
>At5g43620.1 68418.m05332 S-locus protein-related contains some
similarity to S-locus protein 4 GI:6069478 from
[Brassica rapa]
Length = 410
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 579 GATFQRYEQLR-RHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNHAKQ 630
G +F L RH S D MP C CG RF ++H+ H ++
Sbjct: 221 GLSFDNPSSLNVRHESVIKSLYSD-MPRQCTSCGVRFKCQEEHSKHMDWHVRK 272
>At4g10010.1 68417.m01638 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 469
Score = 29.5 bits (63), Expect = 7.5
Identities = 18/76 (23%), Positives = 33/76 (43%)
Query: 69 PPAVELYAARHKQEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTP 128
PP+ EL A +EA ++ K + R G D +++ T E + + K T T
Sbjct: 276 PPSKELDAKVRDEEARRKKSETVKGRGPESVRRGSRDFKSTATTPEFVASGQSKDTITTK 335
Query: 129 DSKKESNTTDKVKGKR 144
+ ++ ++G R
Sbjct: 336 RFNPQEDSRTGLRGDR 351
>At4g04030.1 68417.m00573 ovate family protein 65% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 411
Score = 29.5 bits (63), Expect = 7.5
Identities = 19/80 (23%), Positives = 35/80 (43%)
Query: 62 SPVSHFVPPAVELYAARHKQEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKR 121
S ++H++ R QEA H + + ++ + +RR+ G+ S+T + K
Sbjct: 294 SSLAHYMVQEKLEQMIRETQEATHQEKIRQQKMRRRRRRSEGSISSTKFIVMMAMEKCSF 353
Query: 122 KYTKRTPDSKKESNTTDKVK 141
K DS E +K+K
Sbjct: 354 DPRKDFRDSMVEMIVANKIK 373
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 585 YEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNHAKQLYRCVVCKASFARA 644
+ L+ H HG P AC +CGK F+ H N K L+ C C + F
Sbjct: 324 FRTLQTHYKRKHGVRP----FACRRCGKAFAVKGDWRTHEKNCGK-LWYC-SCGSDFKHK 377
Query: 645 DQLAQHLNS 653
L H+ +
Sbjct: 378 RSLKDHVKA 386
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 29.5 bits (63), Expect = 7.5
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Query: 585 YEQLRRHRSCAHGAAPDGMPHACAQCGKRFSHAHSLTRHLHNHAKQLYRCVVCKASFARA 644
+ L+ H HG+ P AC CGK F+ H N K L+ C C + F
Sbjct: 246 FRTLQTHYKRKHGSKP----FACRMCGKAFAVKGDWRTHEKNCGK-LWYC-SCGSDFKHK 299
Query: 645 DQLAQHLNS 653
L H+ +
Sbjct: 300 RSLKDHVKA 308
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 414 PKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDKSFQ 465
P + PP+ P S+ P ++ PP N+ S N P + Q
Sbjct: 81 PSDSSPPVDSTPSPPPPTSNESPSPPEDSETPPAPPNE-SNDNNPPPSQDLQ 131
>At1g05920.1 68414.m00621 hypothetical protein contains Pfam profile
PF03754: Domain of unknown function (DUF313)
Length = 315
Score = 29.5 bits (63), Expect = 7.5
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 120 KRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPI 179
KR+ + D++K++ T +V+ ++G+ R+ E +S N++ + +V+ E I
Sbjct: 19 KRREEMISRDNQKKTKTVAQVREEKGK-RREEMISRYNQKKAKTVAQVKEGKGKRREEMI 77
Query: 180 NLDSDEEP 187
+ D+ +P
Sbjct: 78 SRDNRTKP 85
>At5g62260.1 68418.m07817 AT hook motif-containing protein contains
Pfam PF03479: Domain of unknown function (DUF296);
contains Pfam PF02178: AT hook motif; similar to AT-Hook
DNA-Binding Protein SAP1 protein (GI:4165183)
[Antirrhinum majus]; similar to AT-hook protein 2,
Arabidopsis thaliana, EMBL:ATAJ4119
Length = 441
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 124 TKRTPDSKKESNTTDKVKGKRGRPRK 149
T TP S S +D K KRGRPRK
Sbjct: 59 TTVTPGSATASTGSDPTKKKRGRPRK 84
>At5g62190.1 68418.m07807 DEAD box RNA helicase (PRH75) nearly
identical to RNA helicase [Arabidopsis thaliana]
GI:1488521; contains Pfam profiles PF00270: DEAD/DEAH
box helicase, PF00271: Helicase conserved C-terminal
domain
Length = 671
Score = 29.1 bits (62), Expect = 9.9
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 80 KQEAMHAQALD-RKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTD 138
K+ A+ LD +K KKE K + +D S KRK ++ + K +S++
Sbjct: 17 KKMALDTPELDSKKGKKEQKLKLSDSDEEESEKKKSKKKDKKRKASEEEDEVKSDSSSEK 76
Query: 139 KVKGKR 144
K K+
Sbjct: 77 KKSSKK 82
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 505 ECDCCNETFNRREKLWEHKAEAHRGSMTVRCEVCRK-CFEDDS 546
+C C FN++E L EH ++ C +C K C DS
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEPTCGICNKHCRSFDS 49
>At4g39920.1 68417.m05654 tubulin folding cofactor C / Porcino (POR)
identical to tubulin-folding cofactor C (Porcino; POR)
GI:20514261 from [Arabidopsis thaliana]; identical to
cDNA tubulin folding cofactor C GI:20514260
Length = 345
Score = 29.1 bits (62), Expect = 9.9
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 85 HAQALDRKAKKEHKRRTGGADSATSSA-----TGELIPK---AKRKYTKRTPDSKKESNT 136
H L+R + + R++ DS++SS+ T + K +KR R +S+ S++
Sbjct: 21 HHDMLERLSARHQARKSDSPDSSSSSSSTLESTSSFLAKFSDSKRSIESRIAESRLASSS 80
Query: 137 TDKVKGKRGRPRKS------EQVSANNKQ-MPQAKIRVRSNLMPDSSEPINLDSDE 185
TD K K S E++ A N +P ++R ++ D + +++ S E
Sbjct: 81 TDSSKLKSDLAEISVAIDNLEKLLAENSYFLPSYEVRSSLKIVSDLKQSLDILSGE 136
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 415 KEEQPPMAHNEDDSGPASDSDTDPE-RAADVPPPQ-ENDVSESENESPDKS 463
KEE+P ED S + +PE + + Q EN++ E+E + ++S
Sbjct: 349 KEEEPEKREKEDSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEES 399
>At4g25210.1 68417.m03628 expressed protein weak similarity to
storekeeper protein [Solanum tuberosum] GI:14268476;
contains Pfam profile PF04504: Protein of unknown
function, DUF573
Length = 368
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 417 EQPPMAHNEDDSGPA---SDSDTD-PERAADVPPPQENDVSESENES 459
E PP++ E++SG + S+S + P++ P+ + ESE+ES
Sbjct: 11 ESPPVSSEEEESGSSGEESESSAEVPKKVESSQKPESDSEGESESES 57
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 620 LTRHLHNHAKQLYRCVVCKASFARADQLAQHLNSH 654
L R L ++ Y+C +C+ SF + L H H
Sbjct: 433 LRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLH 467
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 632 YRCVVCKASFARADQLAQHLNSHLANYKRLK 662
Y C CK F A L H+N H + RL+
Sbjct: 47 YTCSFCKREFRSAQALGGHMNVHRRDRARLR 77
>At2g37740.1 68415.m04629 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 304
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 632 YRCVVCKASFARADQLAQHLNSHLANYKRLK 662
Y C C+ F A L H+N H + RLK
Sbjct: 39 YTCSFCRREFKSAQALGGHMNVHRRDRARLK 69
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 29.1 bits (62), Expect = 9.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 607 CAQCGKRFSHAHSLTRHLHNHAKQLYR 633
C CGK F HSL H+ H + ++
Sbjct: 121 CCLCGKEFQTMHSLFGHMRRHPDRTWK 147
>At2g21520.1 68415.m02561 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative contains
Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to phosphatidylinositol
transfer-like protein IV (GI:14486707) [Lotus japonicus]
Length = 631
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 586 EQLRRHRSCAHGAAPDGMPHACAQCGK----RFSHAHSLTRHLHNHAKQLYRCVVCK 638
E L+ + C HG +G P + GK R S+ R++ H K+ R + K
Sbjct: 159 EVLKHYPQCYHGVDKEGRPIYIERLGKVDPNRLMQVTSMDRYVRYHVKEFERSFMIK 215
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 607 CAQCGKRFSHAHSLTRHLHNHAKQLYRCVVCKASFAR 643
C +CGK+F +L H+ H ++ +R + ++F R
Sbjct: 67 CTECGKQFGSLKALFGHMRCHPERQWRGINPPSNFKR 103
>At2g01650.1 68415.m00091 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 458
Score = 29.1 bits (62), Expect = 9.9
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 414 PKEEQPPMAHNEDDSGPASDSDTDPERA-ADVPPPQENDVSESENESPDKS---FQCHIC 469
P E+P + ++ SG + D DP RA D P ++ S S F+C IC
Sbjct: 67 PLPEKPLSSSDQKISGSTRNPDHDPVRAPQDGFDPYGAFITSSNRSQNGYSLSMFECPIC 126
Query: 470 RKWYSTKVTLKIH 482
+ ++++ + +H
Sbjct: 127 KNPFTSEEEVSVH 139
>At1g80810.1 68414.m09481 expressed protein similar to
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]; similar
to bimD (GI:168025) [Emericella nidulans]
Length = 826
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 410 EDERPKEEQPPMAHNEDDSGPASDSDTDPERAADVPPPQENDVSESENESPDKS 463
ED+ +EE+ + H ED++ + D E +A++ ++ + E E+E KS
Sbjct: 774 EDDEEEEEEE-IDHMEDEAEEEKEEVDDKEASANMSEIEKEEEEEEEDEEKRKS 826
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 505 ECDCCNETFNRREKLWEHKAEAHRGSMTVR 534
ECD C E F R KL +H A++ G TV+
Sbjct: 601 ECDRCGEEFESRTKLHKHLADS--GHATVK 628
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 116 IPKAKRKYTKRTPDSKKESNTTDKVKGKRGRPRKSEQV-SANNKQM 160
+PK + + P S S TT V K PR+S +V +A +KQ+
Sbjct: 793 LPKIPKNMMVKIPGSGMSSRTTSPVSVKSTSPRRSYEVAAAESKQL 838
>At1g68720.1 68414.m07851 cytidine/deoxycytidylate deaminase family
protein contains Pfam profile PF00383: Cytidine and
deoxycytidylate deaminase zinc-binding region
Length = 1307
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Query: 504 YECDCCNETFNRREKLWEHKAEAHRGSMTVRCEVCRKCFEDDSELAAHDR 553
Y+C+ C RR+K E ++E+ RGS V E K + D E R
Sbjct: 217 YDCEHCG----RRKKSSELESESRRGSKLVTGEYIGKSYRGDEEREVRPR 262
>At1g44910.1 68414.m05146 FF domain-containing protein / WW
domain-containing protein contains Pfam profiles
PF01846: FF domain, PF00397: WW domain
Length = 946
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Query: 79 HKQEAMHAQALDRKAKKEHKRRTGGADSATSSATGELIPKAKRKYTKRTPDSKKESNTTD 138
HK E + DRK ++ H D ++ + K+ RK+ S+K +N+ +
Sbjct: 858 HKDEKRKGKDRDRKHRRRH-HNNSDEDVSSDRDDRDESKKSSRKHGNDRKKSRKHANSPE 916
Query: 139 KVKGKRGRPRKSE 151
R + +K E
Sbjct: 917 SESENRHKRQKKE 929
>At1g26300.1 68414.m03206 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 316
Score = 29.1 bits (62), Expect = 9.9
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 139 KVKGKRGRPRKSEQVSANNKQMPQAKIRVRSNLMPDSSEPINL-------DSDEEPDLGN 191
K KG+ G + + + + + +R S + ++ DSDE PD G+
Sbjct: 223 KTKGEHGNEEAKKAPATGETETVEKNVAIRRTSTASSEQDLDTFLLGDLEDSDEAPDDGD 282
Query: 192 GSVKD 196
GS++D
Sbjct: 283 GSLED 287
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.313 0.129 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,584,818
Number of Sequences: 28952
Number of extensions: 652635
Number of successful extensions: 2842
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 2598
Number of HSP's gapped (non-prelim): 279
length of query: 663
length of database: 12,070,560
effective HSP length: 86
effective length of query: 577
effective length of database: 9,580,688
effective search space: 5528056976
effective search space used: 5528056976
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)
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