GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001617-TA|BGIBMGA001617-PA|undefined
         (269 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.6  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   7.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.8  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)

Query: 15  TVKLAANNQSNG 26
           T K+  NNQSNG
Sbjct: 483 TYKITVNNQSNG 494


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query: 88  KNSRDENDPNISE 100
           + S D+NDP+++E
Sbjct: 48  RTSEDDNDPHVNE 60


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query: 88  KNSRDENDPNISE 100
           + S D+NDP+++E
Sbjct: 362 RTSEDDNDPHVNE 374


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query: 88  KNSRDENDPNISE 100
           + S D+NDP+++E
Sbjct: 595 RTSEDDNDPHVNE 607


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query: 88  KNSRDENDPNISE 100
           + S D+NDP+++E
Sbjct: 595 RTSEDDNDPHVNE 607


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/15 (40%), Positives = 13/15 (86%)

Query: 98  ISEAGEMVKLVASND 112
           +S++GE++  +A+ND
Sbjct: 936 VSKSGELIHKIATND 950


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.313    0.127    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,717
Number of Sequences: 317
Number of extensions: 2529
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 269
length of database: 114,650
effective HSP length: 56
effective length of query: 213
effective length of database: 96,898
effective search space: 20639274
effective search space used: 20639274
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 42 (21.0 bits)