Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001617-TA|BGIBMGA001617-PA|undefined
(269 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC122543-1|AAI22544.1| 351|Homo sapiens MSL-1 protein protein. 36 0.20
BC118997-1|AAI18998.1| 351|Homo sapiens MSL-1 protein protein. 36 0.20
X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec... 35 0.26
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein... 35 0.26
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re... 35 0.26
AB209498-1|BAD92735.1| 2359|Homo sapiens low density lipoprotein... 35 0.26
BC127096-1|AAI27097.1| 898|Homo sapiens teashirt family zinc fi... 30 9.8
BC127095-1|AAI27096.1| 898|Homo sapiens teashirt family zinc fi... 30 9.8
AB040907-1|BAA95998.1| 1079|Homo sapiens KIAA1474 protein protein. 30 9.8
>BC122543-1|AAI22544.1| 351|Homo sapiens MSL-1 protein protein.
Length = 351
Score = 35.5 bits (78), Expect = 0.20
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 35 LQKSTKTLLVHPFTCQRNDKNNKYLLETPTIKRKAPLLEIPKDFGKKPKLYEPKNSRDEN 94
L ++++TL PF+C R+ K +K + +RK P+ ++ +F K K PK+S +
Sbjct: 45 LSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEF-SKVKTKTPKHSPIKE 103
Query: 95 DP 96
+P
Sbjct: 104 EP 105
>BC118997-1|AAI18998.1| 351|Homo sapiens MSL-1 protein protein.
Length = 351
Score = 35.5 bits (78), Expect = 0.20
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 35 LQKSTKTLLVHPFTCQRNDKNNKYLLETPTIKRKAPLLEIPKDFGKKPKLYEPKNSRDEN 94
L ++++TL PF+C R+ K +K + +RK P+ ++ +F K K PK+S +
Sbjct: 45 LSETSQTLPPKPFSCGRSGKGHKRKSPFGSTERKTPVKKLAPEF-SKVKTKTPKHSPIKE 103
Query: 95 DP 96
+P
Sbjct: 104 EP 105
>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related precursor
(AA -19 to 4525) protein.
Length = 4544
Score = 35.1 bits (77), Expect = 0.26
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 139 CSKADIVVNKRQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCESV 198
C + VVNK QS +C+C++ + P C NG + + + P+C C
Sbjct: 4347 CLEGACVVNK-QSGDVTCNCTDGRV-APSCLTCVGHCSNGGSCTMNSKMM--PECQCPPH 4402
Query: 199 GDQPKCSSKVKCDCQSQPVKVIFAPAMMPSIYGPVPGIPYLIKPSVKVADSSVESRAFN 257
P+C V Q + I P ++ + V G+ + K V+ A R N
Sbjct: 4403 MTGPRCEEHVFSQQQPGHIASILIPLLLLLLLVLVAGVVFWYKRRVQGAKGFQHQRMTN 4461
>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor) protein.
Length = 4544
Score = 35.1 bits (77), Expect = 0.26
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 139 CSKADIVVNKRQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCESV 198
C + VVNK QS +C+C++ + P C NG + + + P+C C
Sbjct: 4347 CLEGACVVNK-QSGDVTCNCTDGRV-APSCLTCVGHCSNGGSCTMNSKMM--PECQCPPH 4402
Query: 199 GDQPKCSSKVKCDCQSQPVKVIFAPAMMPSIYGPVPGIPYLIKPSVKVADSSVESRAFN 257
P+C V Q + I P ++ + V G+ + K V+ A R N
Sbjct: 4403 MTGPRCEEHVFSQQQPGHIASILIPLLLLLLLVLVAGVVFWYKRRVQGAKGFQHQRMTN 4461
>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-related
protein protein.
Length = 4544
Score = 35.1 bits (77), Expect = 0.26
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 139 CSKADIVVNKRQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCESV 198
C + VVNK QS +C+C++ + P C NG + + + P+C C
Sbjct: 4347 CLEGACVVNK-QSGDVTCNCTDGRV-APSCLTCVGHCSNGGSCTMNSKMM--PECQCPPH 4402
Query: 199 GDQPKCSSKVKCDCQSQPVKVIFAPAMMPSIYGPVPGIPYLIKPSVKVADSSVESRAFN 257
P+C V Q + I P ++ + V G+ + K V+ A R N
Sbjct: 4403 MTGPRCEEHVFSQQQPGHIASILIPLLLLLLLVLVAGVVFWYKRRVQGAKGFQHQRMTN 4461
>AB209498-1|BAD92735.1| 2359|Homo sapiens low density
lipoprotein-related protein 1 variant protein.
Length = 2359
Score = 35.1 bits (77), Expect = 0.26
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 139 CSKADIVVNKRQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCESV 198
C + VVNK QS +C+C++ + P C NG + + + P+C C
Sbjct: 2162 CLEGACVVNK-QSGDVTCNCTDGRV-APSCLTCVGHCSNGGSCTMNSKMM--PECQCPPH 2217
Query: 199 GDQPKCSSKVKCDCQSQPVKVIFAPAMMPSIYGPVPGIPYLIKPSVKVADSSVESRAFN 257
P+C V Q + I P ++ + V G+ + K V+ A R N
Sbjct: 2218 MTGPRCEEHVFSQQQPGHIASILIPLLLLLLLVLVAGVVFWYKRRVQGAKGFQHQRMTN 2276
>BC127096-1|AAI27097.1| 898|Homo sapiens teashirt family zinc
finger 3 protein.
Length = 898
Score = 29.9 bits (64), Expect = 9.8
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 PLLGASGLLQKSTKTLLVHPFTCQRND--KNNKYLLETPTIKRKAPLLEIPKDFGKKP-- 82
P+ G S ++ + LV P + Q + K N + +E K + ++ + K+P
Sbjct: 392 PMFGNSEIVSPTKNQTLVSPPSSQTSPMPKTNFHAMEELVKKVTEKVAKVEEKM-KEPDG 450
Query: 83 KLYEPKNSRDENDPNISEAGEMVKLVASND 112
KL PK R P SE GE +K+ AS+D
Sbjct: 451 KLSPPK--RATPSPCSSEVGEPIKMEASSD 478
>BC127095-1|AAI27096.1| 898|Homo sapiens teashirt family zinc
finger 3 protein.
Length = 898
Score = 29.9 bits (64), Expect = 9.8
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 PLLGASGLLQKSTKTLLVHPFTCQRND--KNNKYLLETPTIKRKAPLLEIPKDFGKKP-- 82
P+ G S ++ + LV P + Q + K N + +E K + ++ + K+P
Sbjct: 392 PMFGNSEIVSPTKNQTLVSPPSSQTSPMPKTNFHAMEELVKKVTEKVAKVEEKM-KEPDG 450
Query: 83 KLYEPKNSRDENDPNISEAGEMVKLVASND 112
KL PK R P SE GE +K+ AS+D
Sbjct: 451 KLSPPK--RATPSPCSSEVGEPIKMEASSD 478
>AB040907-1|BAA95998.1| 1079|Homo sapiens KIAA1474 protein protein.
Length = 1079
Score = 29.9 bits (64), Expect = 9.8
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 27 PLLGASGLLQKSTKTLLVHPFTCQRND--KNNKYLLETPTIKRKAPLLEIPKDFGKKP-- 82
P+ G S ++ + LV P + Q + K N + +E K + ++ + K+P
Sbjct: 573 PMFGNSEIVSPTKNQTLVSPPSSQTSPMPKTNFHAMEELVKKVTEKVAKVEEKM-KEPDG 631
Query: 83 KLYEPKNSRDENDPNISEAGEMVKLVASND 112
KL PK R P SE GE +K+ AS+D
Sbjct: 632 KLSPPK--RATPSPCSSEVGEPIKMEASSD 659
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.313 0.127 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,923,056
Number of Sequences: 224733
Number of extensions: 1536314
Number of successful extensions: 2379
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2377
Number of HSP's gapped (non-prelim): 9
length of query: 269
length of database: 73,234,838
effective HSP length: 89
effective length of query: 180
effective length of database: 53,233,601
effective search space: 9582048180
effective search space used: 9582048180
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)
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