GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001617-TA|BGIBMGA001617-PA|undefined
         (269 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48721-1|CAA88613.1|  378|Drosophila melanogaster salivary gland...    33   0.31 
AL024484-8|CAA19673.1|  301|Drosophila melanogaster EG:96G10.6,F...    33   0.31 
AE014298-505|AAF45860.2|  304|Drosophila melanogaster CG12181-PB...    33   0.41 
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    32   0.95 
Z48722-1|CAA88614.1|  287|Drosophila melanogaster salivary gland...    31   2.2  
BT025914-1|ABG02158.1|  196|Drosophila melanogaster IP08472p pro...    29   5.1  
BT016040-1|AAV36925.1|  671|Drosophila melanogaster LP22276p pro...    29   5.1  
AY122202-1|AAM52714.1|  585|Drosophila melanogaster LD47517p pro...    29   5.1  
AE014297-323|AAN13256.1|  639|Drosophila melanogaster CG2182-PB,...    29   5.1  
AE014297-322|AAF51975.3|  671|Drosophila melanogaster CG2182-PA,...    29   5.1  
X61944-1|CAA43950.1|  297|Drosophila melanogaster salivary glue ...    29   6.7  
X61942-1|CAA43948.1|  290|Drosophila melanogaster salivary glue ...    29   6.7  
AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L lon...    29   6.7  
AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA, ...    29   6.7  

>Z48721-1|CAA88613.1|  378|Drosophila melanogaster salivary gland
           secretion protein 4 protein.
          Length = 378

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 160 NKQSDVPE--CACQSKSIENGVRDNVTERKIEKPKCPCESVGDQPKCSSKVKCDCQSQP 216
           N+    PE  C C SK+   G       + +  PKCP      Q  C    KC    +P
Sbjct: 284 NRPGTTPESGCGCGSKNESGGGGSGCILKDLLTPKCPDSKPKSQASCKPSPKCKSDPKP 342


>AL024484-8|CAA19673.1|  301|Drosophila melanogaster
           EG:96G10.6,FBgn0003374;Sgs4 protein.
          Length = 301

 Score = 33.5 bits (73), Expect = 0.31
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 160 NKQSDVPE--CACQSKSIENGVRDNVTERKIEKPKCPCESVGDQPKCSSKVKCDCQSQP 216
           N+    PE  C C SK+   G       + +  PKCP      Q  C    KC    +P
Sbjct: 207 NRPGTTPESGCGCGSKNESGGGGSGCILKDLLTPKCPDSKPKSQASCKPSPKCKSDPKP 265


>AE014298-505|AAF45860.2|  304|Drosophila melanogaster CG12181-PB
           protein.
          Length = 304

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 160 NKQSDVPE--CACQSKSIENGVRDNVTERKIEKPKCPCESVGDQPKCSSKVKCDCQSQP 216
           N+    PE  C C SK+   G       + +  PKCP      Q  C    KC    +P
Sbjct: 210 NRPGTTPESGCGCGSKNESGGGGSGCILKDLLTPKCPDSKSKSQASCKPAPKCKSDPKP 268


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 4/61 (6%)

Query: 145   VVNKRQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCESVGDQPKC 204
             VVN R    P C C    S  P  +CQ   I +    N  +     P   C   GD P C
Sbjct: 13971 VVNHR----PFCSCPTGMSGNPFVSCQQLIIRDERPQNPCQPSPCGPNSECRVSGDSPSC 14026

Query: 205   S 205
             S
Sbjct: 14027 S 14027



 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%)

Query: 154   PSCDCSNKQSDVPECACQSKSIENG--VRDNVTERKIEKPKCPCESVGDQPKCS 205
             P C C  K +  P   C  + +     +  N  +     P   C SVGDQ +CS
Sbjct: 16546 PICSCPPKHNGNPFLGCFPEPVRRDEVIPKNPCQPSPCGPYAKCTSVGDQAQCS 16599



 Score = 29.1 bits (62), Expect = 6.7
 Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 13/78 (16%)

Query: 136   QQTCSKADIVVNKRQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEK----- 190
             Q TC    I   K  S  P C C    +  P   C   +I N   DN T           
Sbjct: 11726 QHTCGIRAICTTKNHS--PICTCPRTMTGDPFVECTRVAITN---DNTTPSPAPASCVPS 11780

Query: 191   ---PKCPCESVGDQPKCS 205
                P   C+ VG+ P CS
Sbjct: 11781 PCGPNAKCQIVGNSPACS 11798


>Z48722-1|CAA88614.1|  287|Drosophila melanogaster salivary gland
           secretionprotein 4 protein.
          Length = 287

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 160 NKQSDVPE--CACQSKSIENGVRDNVTERKIEKPKCPCESVGDQPKCSSKVKCDCQSQP 216
           N+    PE  C C SK+   G       + +  PKCP      +P+ S K    C+S P
Sbjct: 193 NRPGTTPESGCGCGSKNESGGGGSGCILKDLLTPKCPDSK--PKPQASRKPSPKCKSDP 249


>BT025914-1|ABG02158.1|  196|Drosophila melanogaster IP08472p
           protein.
          Length = 196

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 157 DCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCE 196
           D  + Q DV  C   S SI   V D   E     P CPCE
Sbjct: 17  DADHDQLDVASCI--SSSIAKTVGDKCEECLASMPNCPCE 54


>BT016040-1|AAV36925.1|  671|Drosophila melanogaster LP22276p
           protein.
          Length = 671

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 157 DCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCE 196
           D  + Q DV  C   S SI   V D   E     P CPCE
Sbjct: 492 DADHDQLDVASCI--SSSIAKTVGDKCEECLASMPNCPCE 529


>AY122202-1|AAM52714.1|  585|Drosophila melanogaster LD47517p
           protein.
          Length = 585

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 157 DCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCE 196
           D  + Q DV  C   S SI   V D   E     P CPCE
Sbjct: 406 DADHDQLDVASCI--SSSIAKTVGDKCEECLASMPNCPCE 443


>AE014297-323|AAN13256.1|  639|Drosophila melanogaster CG2182-PB,
           isoform B protein.
          Length = 639

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 157 DCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCE 196
           D  + Q DV  C   S SI   V D   E     P CPCE
Sbjct: 460 DADHDQLDVASCI--SSSIAKTVGDKCEECLASMPNCPCE 497


>AE014297-322|AAF51975.3|  671|Drosophila melanogaster CG2182-PA,
           isoform A protein.
          Length = 671

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)

Query: 157 DCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCE 196
           D  + Q DV  C   S SI   V D   E     P CPCE
Sbjct: 492 DADHDQLDVASCI--SSSIAKTVGDKCEECLASMPNCPCE 529


>X61944-1|CAA43950.1|  297|Drosophila melanogaster salivary glue
           protein protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 160 NKQSDVPE--CACQSKSIENGVRDNVTERKIEKPKCPCESVGDQ--PKCSSKVK 209
           N+    PE  C C SK+   G       + +  PKCP      Q  PKC S  K
Sbjct: 207 NRPGTTPESGCGCGSKNESGGGGSGCILKDLLTPKCPDSKPKPQASPKCKSDPK 260


>X61942-1|CAA43948.1|  290|Drosophila melanogaster salivary glue
           protein protein.
          Length = 290

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 160 NKQSDVPE--CACQSKSIENGVRDNVTERKIEKPKCPCESVGDQ--PKCSSKVK 209
           N+    PE  C C SK+   G       + +  PKCP      Q  PKC S  K
Sbjct: 200 NRPGTTPESGCGCGSKNESGGGGSGCILKDLLTPKCPDSKPKPQASPKCKSDPK 253


>AF215703-1|AAF43004.1| 5322|Drosophila melanogaster KISMET-L long
            isoform protein.
          Length = 5322

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 66   KRKAPLLEIPKDFGKKPKLYEPK--NSRDENDPNISEAGEMVK 106
            K+K      PKD  K P+   PK    +D NDPN +E    VK
Sbjct: 1304 KKKPRKPRTPKDPNKPPRDRTPKAKKPKDPNDPNSTETPAAVK 1346


>AE014134-62|AAF51527.3| 5322|Drosophila melanogaster CG3696-PA,
            isoform A protein.
          Length = 5322

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 66   KRKAPLLEIPKDFGKKPKLYEPK--NSRDENDPNISEAGEMVK 106
            K+K      PKD  K P+   PK    +D NDPN +E    VK
Sbjct: 1304 KKKPRKPRTPKDPNKPPRDRTPKAKKPKDPNDPNSTETPAAVK 1346


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.313    0.127    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,868,004
Number of Sequences: 52641
Number of extensions: 552169
Number of successful extensions: 1130
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1119
Number of HSP's gapped (non-prelim): 25
length of query: 269
length of database: 24,830,863
effective HSP length: 84
effective length of query: 185
effective length of database: 20,409,019
effective search space: 3775668515
effective search space used: 3775668515
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)