Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001617-TA|BGIBMGA001617-PA|undefined
(269 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in bl... 41 0.001
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 36 0.023
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 34 0.12
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 31 0.65
AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf gro... 31 0.87
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 29 3.5
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 29 3.5
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 28 6.1
AF022975-8|AAB70667.4| 195|Caenorhabditis elegans Hypothetical ... 28 6.1
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 28 8.1
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 28 8.1
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 28 8.1
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical... 28 8.1
>U46675-3|AAB52643.1| 375|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 10 protein.
Length = 375
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 154 PSCDCSNKQSDVPECACQSK-SIENGVRDNVTERKIEKPKCPCESVGDQPKC-SSKVKCD 211
P+CDC+ + P C CQ S ++ + +++ ++P C C V P C ++ CD
Sbjct: 133 PACDCA-PVAQQPACDCQQNPSCVTCIQIEIRQQQAQQPACDCAPVQQNPCCQQAQPACD 191
Query: 212 C---QSQP 216
C Q QP
Sbjct: 192 CAPVQQQP 199
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 136 QQTCSKADIVVNKR-QSAMPSCDCSNKQSDVPECAC----QSKSIENGVRDNVTERKIEK 190
Q C A + N Q A P+CDC+ Q P C C Q+ + ++
Sbjct: 169 QPACDCAPVQQNPCCQQAQPACDCAPVQQQ-PSCDCAPVQQNPCCQQAQPACDCAPVQQQ 227
Query: 191 PKCPCESVGDQPKCSSKVKCDCQSQPVK 218
P C C V P C + + C PV+
Sbjct: 228 PACDCAPVQQNPCCQQQAQSTCDCAPVQ 255
Score = 36.7 bits (81), Expect = 0.017
Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Query: 134 TTQQTCSKADIVVNKRQSAMPSCDCSNKQSDVPECACQSKSIENG-----VRDNVTERKI 188
T Q D + Q P+C+C+ Q D CACQ + + V+ + +
Sbjct: 52 TQVQQAPAQDPCACQPQQQQPACNCAPVQQD--PCACQPQQQQPACNCAPVQQDPCACQQ 109
Query: 189 EKPKCPCESVGDQPKCSSKVK----CDC 212
++P C C V QP C + + CDC
Sbjct: 110 QQPSCDCAPVQQQPACDCQPQQQPACDC 137
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 22/67 (32%)
Query: 150 QSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCESVGDQPKCSSKVK 209
Q PSCDC+ Q P C CQ + ++P C C V QP
Sbjct: 108 QQQQPSCDCAPVQQQ-PACDCQPQ---------------QQPACDCAPVAQQP------A 145
Query: 210 CDCQSQP 216
CDCQ P
Sbjct: 146 CDCQQNP 152
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 12/77 (15%)
Query: 144 IVVNKRQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCESVGDQPK 203
I + ++Q+ P+CDC+ Q + P C + + ++P C C V P
Sbjct: 160 IEIRQQQAQQPACDCAPVQQN-PCCQQAQPACDCAPVQ-------QQPSCDCAPVQQNPC 211
Query: 204 C-SSKVKCDC---QSQP 216
C ++ CDC Q QP
Sbjct: 212 CQQAQPACDCAPVQQQP 228
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 155 SCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCESVGDQPKCS----SKVKC 210
+C C+ Q P C CQ +I V+ ++ + C C+ QP C+ + C
Sbjct: 27 ACSCAPVQQQ-PSC-CQQSTINVQVQYTQVQQAPAQDPCACQPQQQQPACNCAPVQQDPC 84
Query: 211 DCQSQ 215
CQ Q
Sbjct: 85 ACQPQ 89
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 136 QQTCSKADIVVNKR-QSAMPSCDCSNKQSDVPECACQ 171
Q TC A + N Q A P+CDC+ P CACQ
Sbjct: 246 QSTCDCAPVQQNPCCQQAQPACDCAPVVQQNP-CACQ 281
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 189 EKPKCPCESVGDQPKCSSKVKCDCQSQPVKVIFAPAMMPSIYGP 232
++ C C V QP C + + Q Q +V APA P P
Sbjct: 24 KRQACSCAPVQQQPSCCQQSTINVQVQYTQVQQAPAQDPCACQP 67
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 36.3 bits (80), Expect = 0.023
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 154 PSCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCESVGDQPKCSSKVKCDCQ 213
PSCDC Q+ C C S S + V N +++ +P+ Q +CSS+ C
Sbjct: 127 PSCDCGTLQNQYSSCGCGSLSYQ--VSCNQCQQQ-SQPQIIVVQQPQQQQCSSQCMPACL 183
Query: 214 SQPVKVIFAPAMMP 227
V+ APA P
Sbjct: 184 PSCVQSSCAPACQP 197
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 154 PSCDCSNKQSDVPECACQSKSIENG-VRDNVTERKIEKPKC-PCE-SVGDQPKCSSKVKC 210
P+CD N + D+ C + G VRD+ T + +EK KC C + KC V+
Sbjct: 92 PTCDNENPECDLV-CMTNVCQCKKGLVRDSATGKCVEKNKCSKCTLECSENEKC-ELVEL 149
Query: 211 DCQSQPVKVI 220
C+ +P +++
Sbjct: 150 TCEEKPCQIV 159
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 31.5 bits (68), Expect = 0.65
Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Query: 139 CSKADIVVNKRQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTERKIEKPKCPCESV 198
C+ + + R S C +++ C N V R++ K +C C+
Sbjct: 1582 CACRNGFIGPRCSVRNPCTAQIASNNISSVTCVHGKCVNPVVQIEKNREVAKYECACDRG 1641
Query: 199 GDQPKCSSKVKCDCQSQPVKVIFAP 223
P CS ++K S + +F P
Sbjct: 1642 YTGPTCSQRIKESAMSN-ISYLFGP 1665
>AC024763-7|AAF60517.1| 304|Caenorhabditis elegans Pdgf/vegf growth
factor relatedprotein 1 protein.
Length = 304
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 13/70 (18%)
Query: 155 SCDCSNKQSDVPECA------------CQSKSIENGVRDNVTERKIEKPKCPCESVGDQP 202
SC C + S+ P+CA C +K N N T E KC C+ ++
Sbjct: 193 SCSCFDCGSNTPQCAPGFVVGRSCTCECANKEERNNCVGNATWNA-ETCKCECDLKCEEG 251
Query: 203 KCSSKVKCDC 212
K K +CDC
Sbjct: 252 KILHKDRCDC 261
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 149 RQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTE-RKIEKPKC--PCESVGDQPKCS 205
+Q+ SC + Q P C+C V+ T+ + C C+S +C
Sbjct: 43 QQTQSCSCQSAPVQQQAPSCSCAQPQQTQTVQVQSTQCAPACQQSCRQQCQSAPAVSQCQ 102
Query: 206 SKVKCDCQSQPVKVIFAPAMMPSIYGPV 233
+ CQSQ + PA + PV
Sbjct: 103 PMCQQQCQSQCTPMYNPPATTTTTPAPV 130
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 149 RQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTE-RKIEKPKC--PCESVGDQPKCS 205
+Q+ SC + Q P C+C V+ T+ + C C+S +C
Sbjct: 43 QQTQSCSCQSAPVQQQAPSCSCAQPQQTQTVQVQSTQCAPACQQSCRQQCQSAPAVSQCQ 102
Query: 206 SKVKCDCQSQPVKVIFAPAMMPSIYGPV 233
+ CQSQ + PA + PV
Sbjct: 103 PMCQQQCQSQCTPMYNPPATTTTTPAPV 130
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 133 KTTQQTCSKADIVVNKRQSAMPSCDCSNKQSDVPECACQSK 173
+T Q TC +A +V QS+ C CS+ S C+ +
Sbjct: 333 QTCQNTCQQAAQIVVPCQSSSSGCGCSSGYSQCGGSCCRRR 373
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Query: 149 RQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVTE-RKIEKPKC--PCESVGDQPKCS 205
+Q+ SC + Q P C+C V+ T+ + C C++ +C
Sbjct: 44 QQTQSCSCQSAPVQQQSPSCSCAQPQQTQNVQVQTTQCAPACQQSCTQQCQAAPSVAQCQ 103
Query: 206 SKVKCDCQSQPVKVIFAPA 224
+ + CQSQ + PA
Sbjct: 104 PQCQQQCQSQCAPMYNPPA 122
>AF022975-8|AAB70667.4| 195|Caenorhabditis elegans Hypothetical
protein K09C6.9 protein.
Length = 195
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 145 VVNKRQSAMPSCDCSNKQS-DVPECACQSKSIENGVRDNVTERKIEK 190
V+NK S + +C +NKQ+ + + AC +K N + VT++ + K
Sbjct: 113 VINKALSTLDTCKANNKQTGNAKQTACMNKVYTNCIA-MVTKQFVNK 158
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 27.9 bits (59), Expect = 8.1
Identities = 36/175 (20%), Positives = 66/175 (37%), Gaps = 15/175 (8%)
Query: 17 KLAANNQSNGPLLGASGLLQKSTKTLLVHPFTCQRNDKNNKYLLETPTIKRKAPLLEIPK 76
K+AA G +G + + L+ P + + K +E +K K +E+P
Sbjct: 413 KMAAGGDQMGASVGMMRMWGNNKTAKLLMPLLSK---EKKKIAMEKVEVKAKNNGIEVPA 469
Query: 77 ---DFGKK---PKLYE-PKNSRDENDPNISEAGEMVKLVASNDCKSTVNXXXXXXXXXXX 129
D +K PKL+ +N+ +E P I E E+V+ + + N
Sbjct: 470 ILTDLDEKSGMPKLFHIEENTENEEPPKILE--ELVQKQIEIEEAAAENAVLFVAHDANT 527
Query: 130 XXXKTTQQTCSKADIVVNKRQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVT 184
Q+ +++Q + QSD EC Q++ + N + + T
Sbjct: 528 QTDILQQEEKGHQ---TDEKQYGEEAVQTEAMQSDNQECETQTEVVHNSIAETQT 579
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 27.9 bits (59), Expect = 8.1
Identities = 36/175 (20%), Positives = 66/175 (37%), Gaps = 15/175 (8%)
Query: 17 KLAANNQSNGPLLGASGLLQKSTKTLLVHPFTCQRNDKNNKYLLETPTIKRKAPLLEIPK 76
K+AA G +G + + L+ P + + K +E +K K +E+P
Sbjct: 413 KMAAGGDQMGASVGMMRMWGNNKTAKLLMPLLSK---EKKKIAMEKVEVKAKNNGIEVPA 469
Query: 77 ---DFGKK---PKLYE-PKNSRDENDPNISEAGEMVKLVASNDCKSTVNXXXXXXXXXXX 129
D +K PKL+ +N+ +E P I E E+V+ + + N
Sbjct: 470 ILTDLDEKSGMPKLFHIEENTENEEPPKILE--ELVQKQIEIEEAAAENAVLFVAHDANT 527
Query: 130 XXXKTTQQTCSKADIVVNKRQSAMPSCDCSNKQSDVPECACQSKSIENGVRDNVT 184
Q+ +++Q + QSD EC Q++ + N + + T
Sbjct: 528 QTDILQQEEKGHQ---TDEKQYGEEAVQTEAMQSDNQECETQTEVVHNSIAETQT 579
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 77 DFGKKPKLYEPKNSRDENDPNISEAGE 103
DFG + +PK +RDE D N E E
Sbjct: 129 DFGSRGNRKKPKRTRDELDENYMEENE 155
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 77 DFGKKPKLYEPKNSRDENDPNISEAGE 103
DFG + +PK +RDE D N E E
Sbjct: 129 DFGSRGNRKKPKRTRDELDENYMEENE 155
>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
protein Y47G6A.29 protein.
Length = 2460
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 133 KTTQQTCSKADIVVN--KRQSAMPSCDCSNKQSDVPECACQSKS--IENGVRDNVTERKI 188
K+ T D+ V+ K + + D SNK+SD+ C S S + ++ + ++
Sbjct: 2153 KSVSSTFKIDDLTVSLTKMKLTLSEADSSNKKSDILRCTLNSSSFNVHTNLKTLTSAKES 2212
Query: 189 EKPK 192
+PK
Sbjct: 2213 NRPK 2216
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.127 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,567,746
Number of Sequences: 27539
Number of extensions: 281908
Number of successful extensions: 575
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 542
Number of HSP's gapped (non-prelim): 32
length of query: 269
length of database: 12,573,161
effective HSP length: 80
effective length of query: 189
effective length of database: 10,370,041
effective search space: 1959937749
effective search space used: 1959937749
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 59 (27.9 bits)
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