GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001616-TA|BGIBMGA001616-PA|IPR006073|GTP1/OBG,
IPR002917|GTP-binding protein, HSR1-related, IPR005289|GTP-binding
         (516 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   2.1  
AY604022-1|AAT38516.1|  172|Anopheles gambiae LZ3788P protein.         25   6.4  
AY330175-1|AAQ16281.1|  200|Anopheles gambiae odorant-binding pr...    25   6.4  
AJ618919-1|CAF01998.1|  200|Anopheles gambiae putative odorant-b...    25   6.4  
AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding pr...    25   6.4  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 15/60 (25%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 253  RKGRQRMCSEGATKILEACKDIVNGEVDLSSWEKKIRDETEIDFDEDEKEIGEAIIQKAD 312
            RK +++  ++ A + ++A    V  EV+L      +RD  E+D +ED  ++   +I + +
Sbjct: 1205 RKTKEQKIAQ-AQEAIDASAPEVEDEVELDKEAPNVRDAAEVD-EEDGLKMENGVIAEVE 1262


>AY604022-1|AAT38516.1|  172|Anopheles gambiae LZ3788P protein.
          Length = 172

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 259 MCSEGATKILEACKDIVNGEVDLSSWEKKIRDETEIDFDEDEKEIGE 305
           M ++G  K  +  K  ++   D   W   +RD T   F+  EK++ E
Sbjct: 66  MYADGMLKRDDLSKMFMDAVKDKPEWMSLVRDATNACFELAEKKMDE 112


>AY330175-1|AAQ16281.1|  200|Anopheles gambiae odorant-binding
           protein AgamOBP48 protein.
          Length = 200

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 259 MCSEGATKILEACKDIVNGEVDLSSWEKKIRDETEIDFDEDEKEIGE 305
           M ++G  K  +  K  ++   D   W   +RD T   F+  EK++ E
Sbjct: 94  MYADGMLKRDDLSKMFMDAVKDKPEWMSLVRDATNACFELAEKKMDE 140


>AJ618919-1|CAF01998.1|  200|Anopheles gambiae putative
           odorant-binding protein OBP3788 protein.
          Length = 200

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 259 MCSEGATKILEACKDIVNGEVDLSSWEKKIRDETEIDFDEDEKEIGE 305
           M ++G  K  +  K  ++   D   W   +RD T   F+  EK++ E
Sbjct: 94  MYADGMLKRDDLSKMFMDAVKDKPEWMSLVRDATNACFELAEKKMDE 140


>AF533512-1|AAM97673.1|  200|Anopheles gambiae odorant binding
           protein-8 protein.
          Length = 200

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 259 MCSEGATKILEACKDIVNGEVDLSSWEKKIRDETEIDFDEDEKEIGE 305
           M ++G  K  +  K  ++   D   W   +RD T   F+  EK++ E
Sbjct: 94  MYADGMLKRDDLSKMFMDAVKDKPEWMSLVRDATNACFELAEKKMDE 140


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.135    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,817
Number of Sequences: 2123
Number of extensions: 22497
Number of successful extensions: 47
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 42
Number of HSP's gapped (non-prelim): 6
length of query: 516
length of database: 516,269
effective HSP length: 67
effective length of query: 449
effective length of database: 374,028
effective search space: 167938572
effective search space used: 167938572
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 50 (24.2 bits)