Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001615-TA|BGIBMGA001615-PA|IPR007087|Zinc finger,
C2H2-type
(143 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 42 2e-04
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 39 0.002
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 33 0.089
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 32 0.16
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 32 0.21
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 31 0.27
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 31 0.36
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 31 0.36
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 31 0.36
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 31 0.48
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 31 0.48
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 30 0.83
07_03_1165 - 24459156-24460139 29 1.1
02_03_0138 - 15629421-15629440,15629521-15629752,15630115-156303... 29 1.1
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 29 1.9
07_01_0893 + 7484598-7484744,7484837-7484902,7494387-7494530,749... 29 1.9
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 29 1.9
03_05_0255 + 22435027-22435072,22436022-22437085 29 1.9
01_05_0421 + 21990034-21990392,21991691-21992681 29 1.9
01_01_0990 + 7847066-7847478,7847713-7848679 29 1.9
09_02_0226 - 6007656-6008063,6012166-6012678 28 2.5
03_04_0187 - 18236041-18236643 28 2.5
09_04_0163 - 15249816-15249920,15250032-15250163,15250463-152506... 28 3.4
06_03_1306 + 29208882-29209547,29209641-29209854,29209947-292100... 28 3.4
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 28 3.4
03_05_0796 + 27787401-27788831 28 3.4
02_04_0316 - 21978330-21979397 28 3.4
11_04_0142 + 14027726-14029081 27 4.4
07_03_1104 + 24001594-24002139 27 5.9
03_06_0477 + 34210844-34211356 27 5.9
03_06_0063 - 31391870-31392679 27 5.9
01_06_1614 - 38648495-38649706 27 5.9
01_01_0720 - 5593311-5595371,5597550-5598027,5598118-5598146 27 5.9
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 27 5.9
12_01_0992 + 10067834-10068133 27 7.7
11_08_0067 - 28135216-28135728 27 7.7
11_03_0135 - 10547460-10547558,10547926-10548086,10548183-105483... 27 7.7
07_03_1207 - 24881074-24881906,24882204-24882285,24882921-24882926 27 7.7
04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019 27 7.7
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 27 7.7
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 27 7.7
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 41.9 bits (94), Expect = 2e-04
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKL--CPATFTWQTSIYKHMKMMHDSKR 90
CDICG+ + +K +K H+ A H + + + KC C +F+ ++++ KH+K HD +
Sbjct: 216 CDICGEKH-LKKNIKRHLRA-HEEVPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQVK 273
Query: 91 NKQTRSQPVKKEDPY 105
R +K PY
Sbjct: 274 PFACRFTGCEKVFPY 288
Score = 35.5 bits (78), Expect = 0.017
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 22 GKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKL--CPATFTWQTSIY 79
G+K E + C CG S++ LK H+ S +SF C L CP ++ + +
Sbjct: 51 GEKVVHEGDHTCQECGASFQKPAHLKQHM----QSHSDERSFICPLEDCPFSYIRKDHLN 106
Query: 80 KHMKMMHDSK 89
+HM + H K
Sbjct: 107 RHM-LKHQGK 115
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 54 HTKRSTAKSFKCKL--CPATFTWQTSIYKHMKMMHDSKRNKQTRSQPVKKED 103
H + K F C + C F+ + ++ +H+K +H+ + ++ Q V KE+
Sbjct: 108 HMLKHQGKLFTCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEE 159
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 32 LCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKL--CPATFTWQTSIYKHMKMMHDSK 89
+CD+CG + +K K H MH + +C L C +F+ ++++ KH+K +H+ K
Sbjct: 414 VCDVCGTK-QLKKNFKRHQ-RMHEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQK 471
Query: 90 R 90
R
Sbjct: 472 R 472
Score = 27.9 bits (59), Expect = 3.4
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 36 CGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSKRNKQTR 95
C + + + ++ HV MH S +S K +CP +T Y H+ K
Sbjct: 323 CNRKFTIKGNIQRHVQEMHKDGSPCESKKEFICPEENCGKTFKYASKLQKHEESHVKLDY 382
Query: 96 SQPV 99
S+ +
Sbjct: 383 SEVI 386
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 33.1 bits (72), Expect = 0.089
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 8/80 (10%)
Query: 22 GKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
GKKK+ + C C + + EK L H AK FKC +C + + H
Sbjct: 2 GKKKKRVEKVFCYYCDREFDDEKILVQH--------QKAKHFKCHVCHKKLSTAGGMAIH 53
Query: 82 MKMMHDSKRNKQTRSQPVKK 101
+ +H K ++P ++
Sbjct: 54 VLQVHKESVTKVPNAKPERE 73
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 32.3 bits (70), Expect = 0.16
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 6/76 (7%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMK 83
+K E + CD CGK Y W H+K + +KC C F+ + S H
Sbjct: 157 RKHGEKKWKCDRCGKRYAVHSD-----WKAHSKVCGTREYKCD-CGTVFSRRDSFVTHRA 210
Query: 84 MMHDSKRNKQTRSQPV 99
+ +QP+
Sbjct: 211 FCDALAQENNKLAQPM 226
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 31.9 bits (69), Expect = 0.21
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 7/57 (12%)
Query: 36 CGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKL--CPATFTWQTSIYKHMKMMHDSKR 90
CGK + + K LK H +R FKC CP TF W + +H++ +H +R
Sbjct: 824 CGKRFSSHKYLKRHQCVHRDER----PFKCPWDGCPMTFKWLWAQTEHIR-VHTGER 875
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 31.5 bits (68), Expect = 0.27
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E C CGK Y + LK HTK + ++C C FT + S H
Sbjct: 130 RKHGEKRWTCQRCGKRYAVQADLKA-----HTKTCGTREYRCD-CGTLFTRRDSFVTH 181
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 31.1 bits (67), Expect = 0.36
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + CD C K Y + W HTK ++ ++C C F+ + S H
Sbjct: 117 RKHGEKKWKCDKCSKKYAVQSD-----WKAHTKTCGSREYRCD-CGTLFSRRDSFITH 168
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 31.1 bits (67), Expect = 0.36
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTK--RSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSK 89
C IC + + ++ L H +H K R + + C +C +FT + + +H++ H ++
Sbjct: 465 CKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKHGAQ 523
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 31.1 bits (67), Expect = 0.36
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + CD C K Y + W HTK K ++C C F+ + S H
Sbjct: 135 RKHGEKKWKCDRCSKKYAVQSD-----WKAHTKICGTKEYRCD-CGTIFSRKDSFITH 186
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 32 LCDICGKSYKTEKRL----KGH--VWAMHTKRSTAKSFKCKLCP 69
+C++C K ++ ++ L +GH W + + ST K +CP
Sbjct: 67 ICEVCHKGFQRDQNLQLHRRGHNLPWKLKQRSSTEAKKKVYVCP 110
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 30.7 bits (66), Expect = 0.48
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMK 83
+K E + CD C K Y + W H+K + ++C C F+ + S H +
Sbjct: 117 RKHGEKKWRCDKCSKRYAVQSD-----WKAHSKTCGTREYRCD-CGTLFSRRDSFITH-R 169
Query: 84 MMHDSKRNKQTRSQPV 99
D+ + R P+
Sbjct: 170 AFCDALAQENARMPPI 185
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 30.7 bits (66), Expect = 0.48
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 21 GGKKKEEESERLCDICGKSYKTEK 44
GG ++EE E LC CG+SY ++
Sbjct: 200 GGGREEEHGETLCGACGESYGADE 223
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 29.9 bits (64), Expect = 0.83
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 57 RSTAKSFKCKLCPATFTWQTSIYKHMKMM 85
++ A + C++C A FT Q+ + H+K+M
Sbjct: 212 KAAAATLICRVCQAKFTCQSDLQSHLKVM 240
>07_03_1165 - 24459156-24460139
Length = 327
Score = 29.5 bits (63), Expect = 1.1
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 62 SFKCKLCPATFTWQTSIYKHMKMMHDSKRNKQTRSQPVKKEDP-YPGIELANR 113
SF C LC F + +++ HM+ +H ++ K+ S P + P +P L R
Sbjct: 112 SFPCHLCNKEFGSRKAVHGHMR-VHHAENEKEPMSLPPQVAAPVHPQARLPTR 163
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 21 GGKKKEEESERLCDICGKSYKTEKRLKGH 49
GG K + + C++CGK Y T L GH
Sbjct: 209 GGAGKPK-GKHPCNVCGKEYPTGVALGGH 236
>02_03_0138 -
15629421-15629440,15629521-15629752,15630115-15630348,
15630486-15630709,15631225-15631509,15631549-15631690
Length = 378
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 73 TWQTSIYKHMKMMHDSKRNKQTRSQ 97
TW SIYKH + + KR+K+ S+
Sbjct: 210 TWLDSIYKHFERLVQEKRDKELESE 234
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E C+ CGK Y W H K + ++C C F+ + S+ H
Sbjct: 117 RKHGEKRWRCERCGKRYAVHSD-----WKAHVKNCGTREYRCD-CGILFSRKDSLLTH 168
>07_01_0893 +
7484598-7484744,7484837-7484902,7494387-7494530,
7494860-7495235,7495904-7496017,7496282-7496454,
7496562-7496669,7497311-7497377,7497791-7497904,
7498121-7498257,7498727-7498813,7498962-7498986,
7499044-7499266,7499770-7499947,7500039-7500152,
7500249-7500380,7500488-7500588,7500720-7500933
Length = 839
Score = 28.7 bits (61), Expect = 1.9
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 10/124 (8%)
Query: 8 TSKILVAHVNNIHGGKKKEEESERLC----DICGKSYKTEKRL--KGHVWAMHTKRSTAK 61
T ++ + + K+ E+E+ + + C ++ +K+ K V + + S A
Sbjct: 244 TENVICSQLQTTPPSKQTEQENSKSNSNKDNACKETQYADKKASSKDFVCSQQSNNSVAS 303
Query: 62 SFKCKLCPATFTWQT-SIYKHMKMMHDSKRNKQTRSQPVKKEDP---YPGIELANRDHYF 117
+ K+ + SI K D K K R QP+K P P E +N+D F
Sbjct: 304 RTRAKILHSASPLSVVSISPSKKNSSDQKIRKAVRKQPLKATQPISTQPDKEESNKDGLF 363
Query: 118 QQNI 121
+ I
Sbjct: 364 VEPI 367
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMK 83
+K E + CD C K Y + W H+K + ++C C F+ + S H +
Sbjct: 113 RKHGEKKWKCDKCSKRYAVQSD-----WKAHSKICGTREYRCD-CGTLFSRRDSFITH-R 165
Query: 84 MMHDSKRNKQTRSQP 98
D+ + +R P
Sbjct: 166 AFCDALAQESSRLPP 180
>03_05_0255 + 22435027-22435072,22436022-22437085
Length = 369
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 22 GKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAK 61
G + E +R C +C KS+ + L GH+ T+R K
Sbjct: 15 GGMAQAEKQRWCKLCNKSFPSYCSLGGHMNLHSTRRRKKK 54
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 65 CKLCPATFTWQTSIYKHMKMMHDSKRNKQTRSQPVKKEDPYPG 107
CKLC +F S+ HM +H ++R K+ +K P G
Sbjct: 26 CKLCNKSFPSYCSLGGHMN-LHSTRRRKKKPPPSPRKAPPITG 67
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + CD C K Y W H+K + +KC C F+ + S H
Sbjct: 76 RKHGEKKWKCDKCSKKYAVHSD-----WKAHSKICGTREYKCD-CGTIFSRRDSFITH 127
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + CD C K Y + W H+K + ++C C F+ + S H
Sbjct: 94 RKHGEKKWKCDKCSKRYAVQSD-----WKAHSKTCGTREYRCD-CGTLFSRRDSFITH 145
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 23 KKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRST--AKSFKCKLCPATFTWQTSIYK 80
+++EEE D+C + K KG W + F C +C TF+ ++
Sbjct: 113 EREEEEEAASDDLCLDYFSMGKLTKGKYWIPTPTQILIGPTHFACPVCCKTFSRYNNLQM 172
Query: 81 HM 82
HM
Sbjct: 173 HM 174
>03_04_0187 - 18236041-18236643
Length = 200
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTA 60
C +CGK++ + + L GH A H K TA
Sbjct: 50 CSVCGKAFPSHQALGGHK-ASHRKPPTA 76
>09_04_0163 -
15249816-15249920,15250032-15250163,15250463-15250629,
15251259-15251448,15252530-15252661,15253275-15253382,
15253513-15253608,15253702-15253809,15253917-15254089,
15255026-15255401,15255887-15256030,15256125-15256799,
15256917-15256982,15257082-15257249
Length = 879
Score = 27.9 bits (59), Expect = 3.4
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 47 KGHVWAMHTKRSTAKSFKCK-LCPATFTWQTSIYKHMKMMHDSKRNKQTRSQPVKKEDP- 104
K V + + S A + K L A+ SI K D K K R QP+K +P
Sbjct: 483 KDFVCSQQSNNSVASRTRAKRLHSASPLSVVSISPSKKYSSDQKIRKAVRKQPLKATEPI 542
Query: 105 --YPGIELANRDHYFQQNI 121
P E +N+D F + I
Sbjct: 543 NTQPDREESNKDALFVEPI 561
>06_03_1306 +
29208882-29209547,29209641-29209854,29209947-29210023,
29210132-29210171,29210254-29210323,29210419-29210488,
29210747-29210995,29212810-29214700,29215458-29215771
Length = 1196
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 22 GKKKEEESERL-CDICGKSYKTEKRLKGHV 50
GK ++E++++ C+ CGK +T RL+ H+
Sbjct: 480 GKTVDKETQKVSCNYCGKVVRTYNRLEHHL 509
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 27.9 bits (59), Expect = 3.4
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 57 RSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSK 89
+S S CK C TF + ++ H K H +K
Sbjct: 164 KSGGGSISCKSCSKTFNSEMALQSHSKAKHPAK 196
>03_05_0796 + 27787401-27788831
Length = 476
Score = 27.9 bits (59), Expect = 3.4
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 26 EEESER-LCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFT 73
E S+R +C ICG+ + + + L GHV H K++ + AT T
Sbjct: 241 ERASKRFVCSICGRCFGSHQALGGHVLG-HKKKAKNAAIAAAARDATTT 288
>02_04_0316 - 21978330-21979397
Length = 355
Score = 27.9 bits (59), Expect = 3.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 28 ESERLCDICGKSYKTEKRLKGHVWA 52
E CDICGK ++ + L+ H+ A
Sbjct: 141 EHVHFCDICGKGFRRDANLRMHMRA 165
>11_04_0142 + 14027726-14029081
Length = 451
Score = 27.5 bits (58), Expect = 4.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 14 AHVNNIHGGKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFK 64
A + HGG + S+ C CG +KT L GH+ TK + + K
Sbjct: 265 AGADGCHGGA---DSSKHRCRECGMEWKTGFALGGHMRKHQTKETVTVNEK 312
>07_03_1104 + 24001594-24002139
Length = 181
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTA 60
C +CGK++ + + L GH A H K S A
Sbjct: 29 CSLCGKAFASYQALGGHK-ASHRKPSAA 55
>03_06_0477 + 34210844-34211356
Length = 170
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 19 IHGGKKKEEESERLCDICGKSYKTEKRLKGHV 50
+H KE + C ICG ++ + L GH+
Sbjct: 97 LHRAADKEHRDKHECHICGLGFEMGQALGGHM 128
>03_06_0063 - 31391870-31392679
Length = 269
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 29 SERLCDICGKSYKTEKRLKGHVWAMHTKRST 59
+E C +CGKS+ + + L GH + K T
Sbjct: 95 AEFKCSVCGKSFSSYQALGGHKTSHRVKLPT 125
>01_06_1614 - 38648495-38649706
Length = 403
Score = 27.1 bits (57), Expect = 5.9
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 21 GGKKKEEESERLCDICGKSYKTEKRLKGHV 50
GG E C CGK + T L GH+
Sbjct: 282 GGSGARPEGNHPCKTCGKEFSTGVALGGHM 311
>01_01_0720 - 5593311-5595371,5597550-5598027,5598118-5598146
Length = 855
Score = 27.1 bits (57), Expect = 5.9
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 17 NNIHGGKKKEEESERLCDICGKSYKTEKRLKGH-VWAMHTKRSTAKSFKCK 66
NN KK+ ES+R + GK + +K L H + +TK ++ K K K
Sbjct: 221 NNKKIDKKRYSESKRATNKVGKQHDLKKMLPLHSILKKYTKHTSVKMVKEK 271
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + CD C K Y W H+K + ++C C F+ + S H
Sbjct: 144 RKHGEKKWKCDKCSKRYAVHSD-----WKAHSKVCGTREYRCD-CGTLFSRRDSFITH 195
>12_01_0992 + 10067834-10068133
Length = 99
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 21 GGKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAK 61
GG+ + EE + C +R G +W + R T K
Sbjct: 39 GGRGEVEEERKRCSTMAGEVALRQRRNGEIWRVADGRGTKK 79
>11_08_0067 - 28135216-28135728
Length = 170
Score = 26.6 bits (56), Expect = 7.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 33 CDICGKSYKTEKRLKGHV 50
CD+CGK + T + L GH+
Sbjct: 101 CDMCGKVFATGQALGGHM 118
>11_03_0135 -
10547460-10547558,10547926-10548086,10548183-10548306,
10548566-10548729,10549803-10549883,10549973-10550097,
10550200-10550430,10550566-10550588,10551055-10551539,
10551678-10552075,10552903-10552988,10553120-10553397,
10553494-10553714,10553927-10554018,10554148-10554213,
10555855-10556022
Length = 933
Score = 26.6 bits (56), Expect = 7.7
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 4 VAFKTSKILVAHVNNIHGGKKKEEESE--RLCDICGKSYKTEK 44
VA S + V + ++I K EE E ++CDICG EK
Sbjct: 248 VAHDISNMAVKNKSSIKSEVKSSEEVEDVKVCDICGDIGAEEK 290
>07_03_1207 - 24881074-24881906,24882204-24882285,24882921-24882926
Length = 306
Score = 26.6 bits (56), Expect = 7.7
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 21 GGKKKEEESERLCDICGKSYKTEKRLKGHV-WAMHTKRSTAKSFKCKLCPATFTWQTSIY 79
GG K E+E+ + + K EK++K V A +TAK K + PA T Q +
Sbjct: 118 GGGKPEKEAAKADKAAAAAAKPEKKVKFDVDDAPPPAAATAKPGKVQPFPAGMT-QADLA 176
Query: 80 KHMKMMHDSKRNKQTRSQ 97
++ + +K+ +Q + Q
Sbjct: 177 PLLEKLKIAKQQQQQQQQ 194
>04_01_0334 - 4395823-4395830,4398575-4399658,4401651-4402019
Length = 486
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTA 60
C +CGK +K + L+ H+ A + TA
Sbjct: 324 CQVCGKGFKRDANLRMHMRAHGDEYKTA 351
>03_05_0704 -
26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 26.6 bits (56), Expect = 7.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 6 FKTSKILVAHVNNIHGGKKKEE 27
FKT +V H+N + G +++EE
Sbjct: 275 FKTKDFVVKHINPLRGNQREEE 296
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/23 (43%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 28 ESER-LCDICGKSYKTEKRLKGH 49
ES+R +C+ICG+ ++ E+ L+ H
Sbjct: 27 ESDRYVCEICGQGFQREQNLQMH 49
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.130 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,193,421
Number of Sequences: 37544
Number of extensions: 157155
Number of successful extensions: 539
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 489
Number of HSP's gapped (non-prelim): 78
length of query: 143
length of database: 14,793,348
effective HSP length: 75
effective length of query: 68
effective length of database: 11,977,548
effective search space: 814473264
effective search space used: 814473264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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