Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001615-TA|BGIBMGA001615-PA|IPR007087|Zinc finger,
C2H2-type
(143 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 44 5e-07
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 38 5e-05
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 36 1e-04
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 36 2e-04
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 29 0.025
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 26 0.18
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 2.9
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 21 5.1
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 21 6.7
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 20 8.9
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 44.4 bits (100), Expect = 5e-07
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 10/97 (10%)
Query: 6 FKTSKILVAHVNNIHGGKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKC 65
F SK L H H G+K CDICGKS+ LK H A + + K +KC
Sbjct: 213 FTCSKQLKVHTRT-HTGEKPYT-----CDICGKSFGYNHVLKLHQVAHYGE----KVYKC 262
Query: 66 KLCPATFTWQTSIYKHMKMMHDSKRNKQTRSQPVKKE 102
LC TF + ++ H+K DS R P++ E
Sbjct: 263 TLCHETFGSKKTMELHIKTHSDSSVVGSPRDSPIEPE 299
Score = 39.5 bits (88), Expect = 1e-05
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 5 AFKTSKILVAHVNNIHGGKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFK 64
AF + +H+ + HG KE E C+ICGK++ RL H + HT K ++
Sbjct: 70 AFDQKNLYQSHLRS-HG---KEGEDPYRCNICGKTFAVPARLTRH-YRTHTGE---KPYQ 121
Query: 65 CKLCPATFTWQTSIYKHMKMMHDSKR 90
C+ C +F+ + ++ H + +H +R
Sbjct: 122 CEYCSKSFSVKENLSVH-RRIHTKER 146
Score = 37.1 bits (82), Expect = 7e-05
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSKRNK 92
C+ C KS+ ++ L H +HTK + +KC +C F +++HM++ + +K
Sbjct: 122 CEYCSKSFSVKENLSVHR-RIHTKE---RPYKCDVCERAFEHSGKLHRHMRIHTGERPHK 177
Query: 93 QT 94
T
Sbjct: 178 CT 179
Score = 30.3 bits (65), Expect = 0.008
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMK 83
CD+C ++++ +L H+ +HT + KC +C TF + HM+
Sbjct: 150 CDVCERAFEHSGKLHRHM-RIHTGE---RPHKCTVCSKTFIQSGQLVIHMR 196
Score = 20.2 bits (40), Expect = 8.9
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 61 KSFKCKLCPATFTWQTSIYKHMK 83
K+++C LC F + H++
Sbjct: 60 KTYQCLLCQKAFDQKNLYQSHLR 82
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 37.5 bits (83), Expect = 5e-05
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSK 89
C +CGK ++ LK HV H +R + ++C +C + + S+ H+ H S+
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQ--EEYRCVICERVYCSRNSLMTHIYTYHKSR 62
Score = 27.1 bits (57), Expect = 0.077
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 23 KKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKR 57
K E + E C IC + Y + L H++ H R
Sbjct: 28 KHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSR 62
Score = 23.4 bits (48), Expect = 0.95
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 58 STAKSFKCKLCPATFTWQTSIYKHMKMMHDSKRNK 92
S K F C+LC + S+ +H+ H ++ +
Sbjct: 1 SAKKLFTCQLCGKVLCSKASLKRHVADKHAERQEE 35
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 36.3 bits (80), Expect = 1e-04
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMKMMH 86
CD+CGK+ T+ LK H H + S C LC F S+ H + H
Sbjct: 374 CDVCGKTLSTKLTLKRHKEQQHFQ--PLNSAVCALCHKVFRTLNSLNNHKSIYH 425
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 35.5 bits (78), Expect = 2e-04
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMKMMH-DSKRN 91
C+ C K + RL+ H+ +HT+ S K C +C ++ S+ H + H +N
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPS--KEPICNICKRVYSSLNSLRNHKSIYHRQHSKN 62
Query: 92 KQTRSQ 97
+Q R +
Sbjct: 63 EQQRKE 68
Score = 28.7 bits (61), Expect = 0.025
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Query: 15 HVNNIHGGKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRS 58
H+ N+H KE +C+IC + Y + L+ H H + S
Sbjct: 21 HIQNVHTRPSKEP----ICNICKRVYSSLNSLRNHKSIYHRQHS 60
Score = 21.4 bits (43), Expect = 3.8
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 63 FKCKLCPATFTWQTSIYKHMKMMH 86
F+C+ C T T + +H++ +H
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVH 26
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 28.7 bits (61), Expect = 0.025
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATF 72
C +CGK++ L+GH+ HT K F C+ C F
Sbjct: 45 CHLCGKAFSRPWLLQGHI-RTHTGE---KPFSCQHCNRAF 80
Score = 21.0 bits (42), Expect = 5.1
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 61 KSFKCKLCPATFTWQTSIYKHMK 83
KSF CK C + ++ H++
Sbjct: 15 KSFSCKYCEKVYVSLGALKMHIR 37
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 25.8 bits (54), Expect = 0.18
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 25 KEEESERL--CDICGKSYKTEKRLKGHVWAMH 54
K E+S+ L C+ C + Y+T+ L H H
Sbjct: 28 KHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 2.9
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 77 SIYKHMKMMHDSKRNKQTRSQPVKKEDPYPGIEL 110
S ++ +H++ R + + V+ E+ YP +EL
Sbjct: 1141 SRFEFRAALHEALRGRTAQLIIVQAENAYPEVEL 1174
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 61 KSFKCKLCPATFTWQTSIYKHMKM 84
K F+C C FT + HM++
Sbjct: 8 KPFECPECHKRFTRDHHLKTHMRL 31
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 20.6 bits (41), Expect = 6.7
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 60 AKSFKCKLCPATFTWQTSIYKHMK 83
+K FKC+ C + ++ + H+K
Sbjct: 14 SKPFKCEKCSYSCVNKSMLNSHLK 37
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 20.2 bits (40), Expect = 8.9
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 89 KRNKQTRSQPVKKEDPYPGIELANRDHYFQQNINLM 124
+ +K T Q ++ +PGIE+A+ Q N++
Sbjct: 413 QEHKNTLPQYTVQQLDFPGIEIADIKLTTNQQRNIL 448
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.130 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,962
Number of Sequences: 429
Number of extensions: 1985
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of query: 143
length of database: 140,377
effective HSP length: 52
effective length of query: 91
effective length of database: 118,069
effective search space: 10744279
effective search space used: 10744279
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)
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