Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001615-TA|BGIBMGA001615-PA|IPR007087|Zinc finger,
C2H2-type
(143 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 43 7e-05
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 43 7e-05
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 34 0.043
At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein ... 34 0.043
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 33 0.099
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 32 0.13
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 32 0.13
At2g31760.1 68415.m03878 zinc finger protein-related contains lo... 30 0.53
At3g13020.1 68416.m01622 hAT dimerisation domain-containing prot... 30 0.70
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 30 0.70
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 29 0.92
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 29 0.92
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 29 1.2
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 29 1.2
At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein ... 29 1.2
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 29 1.2
At1g74250.1 68414.m08599 DNAJ heat shock N-terminal domain-conta... 29 1.2
At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein ... 29 1.6
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 29 1.6
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 28 2.1
At2g19380.1 68415.m02260 RNA recognition motif (RRM)-containing ... 28 2.1
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 28 2.8
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 28 2.8
At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal hydrolase-r... 28 2.8
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 28 2.8
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 28 2.8
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 27 3.7
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 27 3.7
At5g28510.1 68418.m03470 glycosyl hydrolase family 1 protein con... 27 3.7
At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein ... 27 3.7
At4g18820.1 68417.m02778 expressed protein 27 3.7
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 27 3.7
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 27 3.7
At1g47960.1 68414.m05342 invertase/pectin methylesterase inhibit... 27 3.7
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 27 3.7
At1g02310.1 68414.m00176 glycosyl hydrolase family protein 5 / c... 27 3.7
At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein ... 27 4.9
At5g26610.2 68418.m03181 D111/G-patch domain-containing protein ... 27 4.9
At5g26610.1 68418.m03180 D111/G-patch domain-containing protein ... 27 4.9
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ... 27 4.9
At4g18640.1 68417.m02759 leucine-rich repeat transmembrane prote... 27 4.9
At3g10310.1 68416.m01237 kinesin motor protein-related similar t... 27 4.9
At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger) fa... 27 4.9
At1g18550.1 68414.m02314 kinesin motor protein-related contains ... 27 4.9
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 27 6.5
At5g04020.1 68418.m00382 calmodulin-binding protein-related (PIC... 27 6.5
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 27 6.5
At1g55915.1 68414.m06413 expressed protein similar to Hypothetic... 27 6.5
At1g31640.1 68414.m03885 MADS-box protein-related contains INTER... 27 6.5
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 27 6.5
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 27 6.5
At5g41140.1 68418.m05001 expressed protein 26 8.6
At5g40710.1 68418.m04941 zinc finger (C2H2 type) family protein ... 26 8.6
At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein ... 26 8.6
At5g09410.1 68418.m01090 calmodulin-binding protein similar to a... 26 8.6
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 26 8.6
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 26 8.6
At2g33680.1 68415.m04128 pentatricopeptide (PPR) repeat-containi... 26 8.6
At1g74370.1 68414.m08616 zinc finger (C3HC4-type RING finger) fa... 26 8.6
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 26 8.6
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 26 8.6
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 43.2 bits (97), Expect = 7e-05
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKL--CPATFTWQTSIYKHMKMMHDSKR 90
C+ICG + +K +K H+ H + S+ KC++ C +TF+ +++ KHMK +HD R
Sbjct: 277 CEICGSKH-LKKNIKRHL-RTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIR 334
Score = 30.3 bits (65), Expect = 0.53
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 25 KEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKL--CPATFTWQTSIYKHM 82
+E S C CG +K LK H+ S +SF C + C A++ + + +H+
Sbjct: 60 EESSSNHTCQECGAEFKKPAHLKQHM----QSHSLERSFTCYVDDCAASYRRKDHLNRHL 115
Query: 83 KMMHDSK 89
+ H K
Sbjct: 116 -LTHKGK 121
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 43.2 bits (97), Expect = 7e-05
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKL--CPATFTWQTSIYKHMKMMHDSKR 90
C+ICG + +K +K H+ H + S+ KC++ C +TF+ +++ KHMK +HD R
Sbjct: 189 CEICGSKH-LKKNIKRHL-RTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDIR 246
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 33.9 bits (74), Expect = 0.043
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMK 83
+K E + CD C K Y + W H+K K +KC C F+ + S H
Sbjct: 132 RKHGEKKWKCDKCSKKYAVQSD-----WKAHSKICGTKEYKCD-CGTLFSRRDSFITHRA 185
Query: 84 MMHD-SKRNKQTRSQPVKKEDP 104
++ N ++ KK++P
Sbjct: 186 FCDALAEENARSHHSQSKKQNP 207
>At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 353
Score = 33.9 bits (74), Expect = 0.043
Identities = 12/54 (22%), Positives = 28/54 (51%)
Query: 41 KTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSKRNKQT 94
KT+K L H + +R+ +CK C F ++ ++ H+++ H + +++
Sbjct: 56 KTQKSLLDHRFCTRRRRNKKILIRCKECGKGFLYEKCLFNHLQVTHSEESTRRS 109
Score = 33.1 bits (72), Expect = 0.075
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 7 KTSKILVAHVNNIHGGKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCK 66
KT K L+ H +++ ++ C CGK + EK L H+ H++ ST +S C+
Sbjct: 56 KTQKSLLDH--RFCTRRRRNKKILIRCKECGKGFLYEKCLFNHLQVTHSEESTRRSLFCR 113
Score = 26.2 bits (55), Expect = 8.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 26 EEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLC 68
E E C +C K + T + L GH H R+ +KS + K C
Sbjct: 279 EMNIEHRCGLCHKVFSTYQTLGGH-QTFHRMRNKSKS-QTKRC 319
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 32.7 bits (71), Expect = 0.099
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 17 NNIHGGKKK--EEESERLCDICGKSYKTEKRLKGHVWAMHTKR 57
N +GGK+K +++S+ CD CGK ++ + L GH + KR
Sbjct: 212 NAYYGGKRKRGKKQSKYTCDTCGKVLRSYQALGGHRTSHKYKR 254
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/25 (44%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 31 RLCDICGKSYKTEKRLKGHVWAMHT 55
++C +C KS+ K L GH+ A HT
Sbjct: 9 KICQVCKKSFSNGKALGGHMRA-HT 32
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 32.3 bits (70), Expect = 0.13
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMK 83
+K E + C+ C K Y + W H K K +KC C F+ + S H +
Sbjct: 162 RKHGEKKWKCEKCSKKYAVQSD-----WKAHAKTCGTKEYKCD-CGTLFSRRDSFITH-R 214
Query: 84 MMHDSKRNKQTRSQPVKKEDPYPGIELANRDHYF----QQNINL---MQNIVQS 130
D+ + R+ P +P I+ +N H+ QQNI QNI+ +
Sbjct: 215 AFCDALAEESARAMP----NPIM-IQASNSPHHHHHQTQQNIGFSSSSQNIISN 263
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 32.3 bits (70), Expect = 0.13
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 22 GKKKEEESERL-CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYK 80
GKKK+ +E++ C C + + EK L H AK FKC +C + + +
Sbjct: 2 GKKKKRATEKVWCYYCDREFDDEKILVQH--------QKAKHFKCHVCHKKLSTASGMVI 53
Query: 81 HMKMMHDSKRNK 92
H+ +H K
Sbjct: 54 HVLQVHKENVTK 65
>At2g31760.1 68415.m03878 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 514
Score = 30.3 bits (65), Expect = 0.53
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Query: 31 RLCDICGKSYKTEKRLKGHVW-AMHTKRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSK 89
R C ICGKSY +V A H KR+ +S + W + +K M D +
Sbjct: 303 RFCWICGKSYSDHYACNNYVEDADHDKRTLLQSEIKRYTHYYVRWVENQSSRLKAMSDLE 362
Query: 90 RNKQTRSQPVKKEDPYPGIEL 110
+ + + + + P I+L
Sbjct: 363 KFQSVQLKQLSDNQCKPKIDL 383
>At3g13020.1 68416.m01622 hAT dimerisation domain-containing protein
contains Pfam profile: PF04937 domain of unknown
function (DUF659), weak hit to PF05699: hAT family
dimerisation domain
Length = 605
Score = 29.9 bits (64), Expect = 0.70
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 20 HGGKKKEEESERLCDICGKSYKTEKRLKGHVWAMHT--------KRSTAKSFKCKLCPAT 71
HG +++S C+ CGK + RLK H+ A+ T + ++F+ L
Sbjct: 11 HGICVDKKKSRVKCNYCGKEMNSFHRLKHHLGAVGTDVTHCDQVSLTLRETFRTMLMEDK 70
Query: 72 FTWQTSIYKHMK--MMHDSKRNKQTRSQPVKKEDPYPG---IELANRD 114
+ T K + M DS++ ++T K P G +E+ N+D
Sbjct: 71 SGYTTPKTKRVGKFQMADSRKRRKTEDSSSKSVSPEQGNVAVEVDNQD 118
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 29.9 bits (64), Expect = 0.70
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + CD C K Y + W H+K K ++C C F+ + S H
Sbjct: 150 RKHGEKKWKCDKCSKRYAVQSD-----WKAHSKTCGTKEYRCD-CGTLFSRRDSFITH 201
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 32 LCDICGKSYKTEKRL----KGHVWAMHTKRSTAKSFKCK--LCP 69
+C++C K ++ E+ L +GH K+ + K K K LCP
Sbjct: 82 ICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCP 125
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 29.5 bits (63), Expect = 0.92
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 11/103 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMK 83
+K E + C+ C K Y + W H K + +KC C F+ + S H +
Sbjct: 152 RKHGEKKWKCEKCSKKYAVQSD-----WKAHAKTCGTREYKCD-CGTLFSRKDSFITH-R 204
Query: 84 MMHDSKRNKQTRSQPVKKEDPYPGIELANRDHYFQQNINLMQN 126
D+ + R + +P I N + F N+M N
Sbjct: 205 AFCDALTEEGARMSSLSNNNPV--ISTTNLN--FGNESNVMNN 243
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 29.5 bits (63), Expect = 0.92
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + CD C K Y + W H+K K ++C C F+ + S H
Sbjct: 151 RKHGEKKWKCDKCSKRYAVQSD-----WKAHSKTCGTKEYRCD-CGTIFSRRDSYITH 202
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 6/44 (13%)
Query: 32 LCDICGKSYKTEKRL----KGH--VWAMHTKRSTAKSFKCKLCP 69
LC++C K ++ E+ L +GH W + K + K LCP
Sbjct: 83 LCEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCP 126
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + C+ C K Y + W H+K K +KC C F+ + S H
Sbjct: 130 RKHGEKKWKCEKCSKKYAVQSD-----WKAHSKICGTKEYKCD-CGTLFSRRDSFITH 181
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 36 CGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSKR 90
CGK ++ K L H +R S+K C TF WQ + +H++ +H +R
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKG--CSMTFKWQWARTEHLR-LHTGER 1296
>At4g04404.1 68417.m00636 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 230
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGH 49
K + +S C ICGKS++ + L GH
Sbjct: 84 KLQSKSSHRCQICGKSFECYQALGGH 109
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 6/44 (13%)
Query: 32 LCDICGKSYKTEKRL----KGHVWAMHTKRSTAKSFKCK--LCP 69
+CD+C K ++ E+ L +GH K+ + K K K LCP
Sbjct: 84 ICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCP 127
Score = 27.9 bits (59), Expect = 2.8
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + C+ C K Y + W H+K K ++C C F+ + S H
Sbjct: 152 RKHGEKKWKCEKCSKRYAVQSD-----WKAHSKTCGTKEYRCD-CGTIFSRRDSYITH 203
>At1g74250.1 68414.m08599 DNAJ heat shock N-terminal
domain-containing protein contains Pfam domains PF00226:
DnaJ domain and PF00096: Zinc finger, C2H2 type
Length = 630
Score = 29.1 bits (62), Expect = 1.2
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 25 KEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAK 61
K + + C +C K +K+EK+ K H + K A+
Sbjct: 302 KRKNEQLYCIVCSKKFKSEKQWKNHEQSKKHKEKVAE 338
>At5g03740.1 68418.m00335 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 287
Score = 28.7 bits (61), Expect = 1.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 59 TAKSFKCKLCPATFTWQTSIYKHMKMMHDS 88
+A +F CK C TFT + + H K H +
Sbjct: 256 SAGAFGCKSCTRTFTSEMGLQSHTKAKHSA 285
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 5 AFKTSKILVAHVNNIHGGKKKEEESERLCDICGKSYKTEKRLKGHVWAMHTK--RSTAKS 62
+F K+L HV H + E+ C CG + +++L HV A+H +S +
Sbjct: 504 SFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLVHVQAVHPSECKSLTVA 563
Query: 63 FKCKLCPATFT 73
+C L F+
Sbjct: 564 SECNLTNGEFS 574
Score = 27.1 bits (57), Expect = 4.9
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 23 KKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKS--FKCKLCPATFTWQTSIYK 80
K+K S C IC S+ K L+ HV H + K +C C + F + +
Sbjct: 488 KEKWSFSGFACAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLV 547
Query: 81 HMKMMHDSK 89
H++ +H S+
Sbjct: 548 HVQAVHPSE 556
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + CD C K Y + K H+K K ++C C F+ + S H
Sbjct: 169 RKHGEKKWKCDKCSKKYAVQSDCKA-----HSKTCGTKEYRCD-CGTLFSRRDSFITH 220
>At2g19380.1 68415.m02260 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains InterPro
entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM); contains Pfam profile PF00096:
Zinc finger, C2H2 type
Length = 613
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 65 CKLCPATFTWQTSIYKHM-KMMHDSKRNKQTRSQPVKKEDPYPGIELAN 112
C LC AT T + + H+ H K N+ K++ +P ++ N
Sbjct: 87 CSLCNATMTCEQDYFAHVYGKKHQEKANEVADMDYSKQQSEHPAVDKNN 135
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + CD C K Y W H K ++ F+C C F+ + S H
Sbjct: 76 RKHGEKKWKCDKCSKKYAVISD-----WKAHNKICGSREFRCD-CGTLFSRKDSFISH 127
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + CD C K Y W H+K K ++C C F+ + S H
Sbjct: 138 RKHGEKKWKCDKCSKKYAVMSD-----WKAHSKICGTKEYRCD-CGTLFSRKDSFITH 189
>At1g65110.1 68414.m07381 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF00443:
Ubiquitin carboxyl-terminal hydrolase, PF04780: Protein
of unknown function (DUF629), PF04781: Protein of
unknown function (DUF627)
Length = 1094
Score = 27.9 bits (59), Expect = 2.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 61 KSFKCKLCPATFTWQTSIYKHMKMMHDSK 89
K + C+ C TF + H++ +HD+K
Sbjct: 202 KFWMCRTCSQTFFYPKKFKNHLEQVHDAK 230
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 32 LCDICGKSYKTEKRL----KGHVWAMHTKRSTAKSFKCK--LCP 69
LC+ICGK ++ ++ L +GH K+ T+K + + +CP
Sbjct: 71 LCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCP 114
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + C+ C K Y + W H+K + ++C C F+ + S H
Sbjct: 139 RKHGEKKWKCEKCAKRYAVQSD-----WKAHSKTCGTREYRCD-CGTIFSRRDSFITH 190
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 56 KRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSKRNKQTR 95
K+ST+ +C +C FT ++ H K H S N+ TR
Sbjct: 202 KKSTSSHHECPICAKVFTSGQALGGH-KRSHASANNEFTR 240
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 23 KKKEEESERLCDICGKSYKTEKRLKGH 49
KKK S C IC K + + + L GH
Sbjct: 201 KKKSTSSHHECPICAKVFTSGQALGGH 227
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 32 LCDICGKSYKTEKRL----KGHVWAMHTKRSTAKSFKCK--LCP 69
LC++CGK ++ ++ L +GH K+ T+K + + +CP
Sbjct: 67 LCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCP 110
Score = 27.5 bits (58), Expect = 3.7
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKH 81
+K E + C+ C K Y + W H+K + ++C C F+ + S H
Sbjct: 135 RKHGEKKWTCEKCAKRYAVQSD-----WKAHSKTCGTREYRCD-CGTIFSRRDSFITH 186
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 32 LCDICGKSYKTEKRLKGH 49
+C +CGKS+ T + L GH
Sbjct: 119 VCSVCGKSFATGQALGGH 136
>At5g28510.1 68418.m03470 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis
thaliana]
Length = 533
Score = 27.5 bits (58), Expect = 3.7
Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 9/104 (8%)
Query: 1 MSFVAFKTSKILVAHVNNIHGGKKKEEESERLCDICGKSYKTEKRLKGHVWAMH-----T 55
+ +V K + + + N +G KE +S + Y E LK H+W+MH
Sbjct: 411 LKYVKDKYANPEIIIMENGYGENLKENDS---VENGTADYNRESYLKKHLWSMHKAICED 467
Query: 56 KRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSKRNKQTRSQPV 99
K + F L F WQ + + +N TR + V
Sbjct: 468 KVNVTGYFVWSLMD-NFEWQDGFKNRFGLYYIDYKNNLTRHEKV 510
>At5g15480.1 68418.m01812 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 402
Score = 27.5 bits (58), Expect = 3.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 33 CDICGKSYKTEKRLKGHVWAMH 54
C+ CGK ++ EK K H MH
Sbjct: 66 CEECGKGFRYEKYFKNHRSMMH 87
>At4g18820.1 68417.m02778 expressed protein
Length = 1111
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATF 72
K +E+S+ + G+S + + + K HV A H R +S K P TF
Sbjct: 396 KNDEDSDLASE--GRSGEKKHKKKSHVNARHRHRQQHQSLTEKYTPKTF 442
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 23 KKKEEESERLCDI--CGKSYKTEKRLKGHVWAMHTKRSTAKSFK 64
K +E+ +C C K Y E +LK HV A H K ++ K
Sbjct: 160 KTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGGGETPK 203
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 27.5 bits (58), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 26 EEESERLCDICGKSYKTEKRLKGH 49
+ +S C ICGKS++ + L GH
Sbjct: 38 QSKSSHKCKICGKSFECYQALGGH 61
>At1g47960.1 68414.m05342 invertase/pectin methylesterase
inhibitor family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 205
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 16 VNNIHGGKKKEEESERLCDICGKSYKT 42
+N I+G KK E +R D C + YKT
Sbjct: 73 LNEINGLYKKRPELKRALDECSRRYKT 99
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 27.5 bits (58), Expect = 3.7
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 7 KTSKILVAHVNNIHGGKKKEEESE----RLCDICGKSYKTEKRLKGHVWAMHTKR 57
K +K V H I K+++++ + R C CGK + + K L GH+ A H++R
Sbjct: 66 KKNKRFVDH-RQIMALKQQQQQQQLQELRRCRECGKGFVSSKALCGHM-ACHSER 118
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 16 VNNIHGGKKKEEESERLCDICGKSYKTEKRLKGH 49
V +G KKK + E C IC + +K+ + L GH
Sbjct: 386 VKKANGAKKKSKGHE--CPICFRVFKSGQALGGH 417
>At1g02310.1 68414.m00176 glycosyl hydrolase family protein 5 /
cellulase family protein / (1-4)-beta-mannan
endohydrolase, putative similar to (1-4)-beta-mannan
endohydrolase precursor GI:9836826 from [Lycopersicon
esculentum]
Length = 411
Score = 27.5 bits (58), Expect = 3.7
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 10 KILVAHVNNI--HGGKKKEEESERLC--DICGKSYKTEKRLKGHVWAMHTKRSTAKSFKC 65
K++++ VNN +GG+KK E L D + ++ K HV + T+++T
Sbjct: 125 KLIISLVNNFEDYGGRKKYVEWAGLDEPDEFYTNSAVKQFYKNHVKTVLTRKNTITGRMY 184
Query: 66 KLCPATFTWQ 75
K P F+W+
Sbjct: 185 KDDPTIFSWE 194
>At5g52010.1 68418.m06454 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 396
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 32 LCDICGKSYKTEKRLKGHVWAMHTKRSTAK 61
+C +CG+ KT LK H +H + K
Sbjct: 153 ICGVCGRKCKTNLDLKKHFKQLHERERQKK 182
>At5g26610.2 68418.m03181 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 301
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 25 KEEESERLCDICGKSYKTEKRLKGHVWAM-HTKRSTAKSFK 64
KE C++C K Y+T +GH+ + H + K K
Sbjct: 155 KEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMK 195
>At5g26610.1 68418.m03180 D111/G-patch domain-containing protein
contains Pfam PF01585: G-patch domain
Length = 301
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 25 KEEESERLCDICGKSYKTEKRLKGHVWAM-HTKRSTAKSFK 64
KE C++C K Y+T +GH+ + H + K K
Sbjct: 155 KEIRKVFYCELCSKQYRTVMEFEGHLSSYDHNHKKRFKEMK 195
>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 215
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFK 64
C C K + T + L GH A +RS AK K
Sbjct: 69 CTFCKKEFSTSQALGGHQNAHKQERSLAKRRK 100
>At4g18640.1 68417.m02759 leucine-rich repeat transmembrane protein
kinase, putative
Length = 686
Score = 27.1 bits (57), Expect = 4.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 25 KEEESERLCDICGKSYKTEKR 45
KEEE E +CD+ + KTE+R
Sbjct: 623 KEEELEVICDVIRECLKTEQR 643
>At3g10310.1 68416.m01237 kinesin motor protein-related similar to
carboxy-terminal kinesin 2 GB:P79955 [Xenopus laevis]
Length = 897
Score = 27.1 bits (57), Expect = 4.9
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 54 HTKRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSKRNKQTRSQPVKKEDPYPGIELANR 113
H K T + K+ P +TS +H+ M +RN T + D GI
Sbjct: 153 HVKTPTFQLSATKIHPTLSASKTS--RHLDMSSVRERNDCTDGE----SDKLKGIAKLFA 206
Query: 114 DHYFQQNINLMQNIV 128
DH F N+ +N+V
Sbjct: 207 DHIFSSKENIDENLV 221
>At1g51930.1 68414.m05854 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 132
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 9 SKILV-AHVNNIHGGKKKEEESERLCDICGKSYKTEKRLK 47
SK LV + GG+++E +R C IC + Y+ + +++
Sbjct: 55 SKALVFKDIKEEEGGREEEGGGKRFCPICLEEYEDDHQIR 94
>At1g18550.1 68414.m02314 kinesin motor protein-related contains
similarity to kinesin-related protein GI:4493964 from
[Plasmodium falciparum]
Length = 799
Score = 27.1 bits (57), Expect = 4.9
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 7 KTSKILVAHVNNIHGGKKKEEESERLCDICG-KSYKTEKRLK 47
K K+ + + HG + K+++ E + D+C KS KT +R K
Sbjct: 602 KALKMEMERMKREHGLQMKKQKDELMKDLCSRKSEKTPERCK 643
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 23 KKKEEESERLCDICGKSYKTEKRLKGH 49
+++ EE + +C CGK + + K L GH
Sbjct: 71 EEEGEEKKHICCECGKRFVSGKALGGH 97
Score = 26.2 bits (55), Expect = 8.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 30 ERLCDICGKSYKTEKRLKGH 49
+ +C+IC KS+ T + L GH
Sbjct: 410 DHVCNICHKSFSTGQALGGH 429
>At5g04020.1 68418.m00382 calmodulin-binding protein-related (PICBP)
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 1495
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 73 TWQTSIYKHMKMMHDSKRNKQTRSQPVK---KEDPYPGIELAN 112
TW+ I KHM M +S+ N+ Q K D GI+ AN
Sbjct: 763 TWRNLIQKHMVMRDNSEGNRNETEQEHKWSYGTDQMTGIDDAN 805
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 26.6 bits (56), Expect = 6.5
Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 24 KKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPATFTWQTSIYKHM- 82
+K E + C+ C K Y + W HTK + ++C C F+ + + H
Sbjct: 152 RKHGEKKWKCEKCSKFYAVQSD-----WKAHTKICGTRDYRCD-CGTLFSRKDTFITHRA 205
Query: 83 ---KMMHDSKRNKQTRSQPVKKEDP 104
+ +S R T S + +P
Sbjct: 206 FCDALAEESARLHSTSSSNLTNPNP 230
>At1g55915.1 68414.m06413 expressed protein similar to Hypothetical
30.6 kDa protein in ACT5-YCK1 intergenic region
(Swiss-Prot:P38838) [Saccharomyces cerevisiae]; similar
to Yhr134wp (GI:500671) [Saccharomyces cerevisiae]
Length = 404
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 32 LCDICGKSYKTEKRLKGHVWAMH--TKRSTAKSFKCKLC 68
+C++C + E+ +K VW+ T + K KC+ C
Sbjct: 346 ICELCTAAKPKEREMKHKVWSCKFCTLENEVKLEKCEAC 384
>At1g31640.1 68414.m03885 MADS-box protein-related contains
INTERPRO:IPR02100 MADS-box domain ;similar to MADS box
transcription factor GI:3688589 from [Triticum aestivum]
Length = 464
Score = 26.6 bits (56), Expect = 6.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 102 EDPYPGIELANRDHYFQQNINLMQNIVQSVHVQPLEV 138
E P + DH QN+N QN + VH Q L V
Sbjct: 245 EPVQPYVPTGFSDHIQYQNMNFNQNQQEPVHYQALAV 281
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTK-RSTAKSFKCKLCPA 70
C IC K++ ++ H+W ++ R A S K + PA
Sbjct: 182 CSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPA 220
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 26.6 bits (56), Expect = 6.5
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 56 KRSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSKRNKQTRSQPVKKEDPY 105
K+ TA+ F+CK C FT ++ H K ++ + ++E+ Y
Sbjct: 143 KQKTAQVFQCKACKKVFTSHQALGGHRASHKKVKGCFASQDKEEEEEEEY 192
>At5g41140.1 68418.m05001 expressed protein
Length = 983
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 57 RSTAKSFKCKLCPATFTWQTSIYKHMKMMHDSKRNK 92
+ST K+ K + W++ +Y+ +K + D K K
Sbjct: 47 KSTGKAEKAMVLDGHCRWESPVYETVKFLQDVKTGK 82
>At5g40710.1 68418.m04941 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 272
Score = 26.2 bits (55), Expect = 8.6
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 23 KKKEEESERLCDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKC--KLCPA 70
K + + +E C C K++ EK L H + H A KC LC A
Sbjct: 99 KLRSDINEWRCGFCKKAFYEEKYLDKHFDSRHYNLLNASHGKCLSDLCGA 148
>At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 427
Score = 26.2 bits (55), Expect = 8.6
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 6 FKTSKILVAHVNNIHGGKKKEEES------ERLCDICGKSYKTEKRLKGHVWAMHTKRST 59
+ TS++L H++ H + + S E L + CG +KT K H+ H +T
Sbjct: 180 YPTSRLLSIHISEAHDSFFQAKVSRGYDMYECLVEGCGLKFKTYKARHRHLIDKHKFPTT 239
Query: 60 AKSFK 64
+ FK
Sbjct: 240 FEFFK 244
>At5g09410.1 68418.m01090 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from [Nicotiana tabacum]
Length = 1007
Score = 26.2 bits (55), Expect = 8.6
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 15 HVNNIHGGKKKEEESERLCDI 35
+V+ +HG + +E +S+RL D+
Sbjct: 214 NVSQVHGNRVRESDSQRLVDV 234
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 26.2 bits (55), Expect = 8.6
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 26 EEESERLCDICGKSYKTEKRLKGH 49
+ + + C +CGKS+ + + L GH
Sbjct: 89 DHQKDYKCSVCGKSFPSYQALGGH 112
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 33 CDICGKSYKTEKRLKGHVWAMHTKRSTAKSFKCKLCPA 70
C IC +S+ T + L GH+ + + SF + P+
Sbjct: 96 CSICSQSFGTGQALGGHMRRHRSSMTVEPSFISPMIPS 133
>At2g33680.1 68415.m04128 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 727
Score = 26.2 bits (55), Expect = 8.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 70 ATFTWQTSIYKHMKMMHDSKRN-KQTRSQPVKKEDPYPGIELANRDHYF 117
+T+ + IY + M D +R K R+ V KE IEL N+ H F
Sbjct: 627 STYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVF 675
>At1g74370.1 68414.m08616 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 261
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 22 GKKKEEESERLCDICGKSYKTEKRLKGHVWAMHT 55
G+K +E + C IC +S+ + + +W HT
Sbjct: 35 GRKTTKEEKLECPICWESFNVVENVPYVLWCGHT 68
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 17 NNIHGGKKKEEESERLCDICGKS 39
+ +HG KKEEE + D+ GK+
Sbjct: 4511 DQLHGTDKKEEEEKEQDDVLGKN 4533
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 27 EESERLCDICGKSYKTEKRLKGHVWAMHTKRST 59
+E+ LC C K++ + K L GH+ +HT ++
Sbjct: 5 KENSFLCKYCYKTFPSGKALGGHI-RIHTNENS 36
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.130 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,583,267
Number of Sequences: 28952
Number of extensions: 141826
Number of successful extensions: 643
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 564
Number of HSP's gapped (non-prelim): 114
length of query: 143
length of database: 12,070,560
effective HSP length: 74
effective length of query: 69
effective length of database: 9,928,112
effective search space: 685039728
effective search space used: 685039728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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