Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001614-TA|BGIBMGA001614-PA|IPR007087|Zinc finger,
C2H2-type
(446 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 44 2e-04
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 44 3e-04
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 43 4e-04
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 43 4e-04
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 42 6e-04
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 42 0.001
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 42 0.001
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 41 0.001
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 41 0.002
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 40 0.003
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 40 0.003
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 40 0.003
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 40 0.003
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 40 0.003
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 40 0.003
At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein ... 39 0.006
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 39 0.006
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 39 0.006
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 38 0.014
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 38 0.018
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 38 0.018
At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein ... 37 0.031
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 36 0.072
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 34 0.17
At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein ... 34 0.17
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 34 0.22
At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein ... 34 0.22
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 34 0.22
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 34 0.22
At3g42860.1 68416.m04491 zinc knuckle (CCHC-type) family protein... 33 0.29
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 33 0.29
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 33 0.38
At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein ... 33 0.51
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 32 0.89
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 32 0.89
At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein ... 32 0.89
At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein ... 32 0.89
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 32 0.89
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 31 1.2
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 31 1.2
At4g04695.1 68417.m00689 calcium-dependent protein kinase, putat... 31 1.6
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 31 1.6
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 31 1.6
At4g34990.1 68417.m04961 myb family transcription factor (MYB32)... 31 2.0
At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein ... 31 2.0
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 31 2.0
At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein ... 31 2.0
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 30 2.7
At3g07000.1 68416.m00831 DC1 domain-containing protein contains ... 30 3.6
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 30 3.6
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 30 3.6
At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger) fa... 29 4.7
At3g46690.1 68416.m05068 UDP-glucoronosyl/UDP-glucosyl transfera... 29 4.7
At5g41170.1 68418.m05004 pentatricopeptide (PPR) repeat-containi... 29 6.3
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 29 6.3
At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ... 29 6.3
At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein ... 29 6.3
At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein ... 29 8.3
At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein ... 29 8.3
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 44.0 bits (99), Expect = 2e-04
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 325 CGKVFASKMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSG-MTY 383
CGK F S L H RV + +++P L P KGC F S H VH+G Y
Sbjct: 1267 CGKNFFSHKYLVQHQRV---HSDDRP---LKCPWKGCKMTFKWAWSRTEHIRVHTGARPY 1320
Query: 384 PC--PICGKLFQWKRNLARHTR--NHREKDT 410
C P CG+ F++ + +RH R H K T
Sbjct: 1321 VCAEPDCGQTFRFVSDFSRHKRKTGHSVKKT 1351
Score = 40.3 bits (90), Expect = 0.003
Identities = 31/84 (36%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 357 PCKGCSKVFHSKKSYRAHAVVHS-GMTYPCPI--CGKLFQWKRNLARHTRNHREKDTGA- 412
P KGC K F S K H VHS CP C F+W + H R H TGA
Sbjct: 1263 PIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVH----TGAR 1318
Query: 413 VYECRE--CNKTFASRDCYANHLR 434
Y C E C +TF ++ H R
Sbjct: 1319 PYVCAEPDCGQTFRFVSDFSRHKR 1342
Score = 29.5 bits (63), Expect = 4.7
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 344 QNKEEKPKEKLYIPC--KGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARH 401
+ +E + +E C +GC+ F S+K ++H P CGK F + L +H
Sbjct: 1225 EEEENEEEECAAYQCNMEGCTMSFSSEKQL----MLHKRNICPIKGCGKNFFSHKYLVQH 1280
Query: 402 TRNHREKDTGAVYECRECNKTFASRDCYANHLRL 435
R H + D + C TF H+R+
Sbjct: 1281 QRVHSD-DRPLKCPWKGCKMTFKWAWSRTEHIRV 1313
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 43.6 bits (98), Expect = 3e-04
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 299 QIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKYHLRVVPQNKEEKPKEKLYIPC 358
++ + +K+KL HK + + + CGK F + L H RV +K+E+P E +
Sbjct: 1223 KMTFESKAKLQTHK----RNRCTHEGCGKKFRAHKYLVLHQRV---HKDERPFECSW--- 1272
Query: 359 KGCSKVFHSKKSYRAHAVVHSG-MTYPCPI--CGKLFQWKRNLARHTR 403
KGCS F + + H +H+G Y C + CG F++ + +RH R
Sbjct: 1273 KGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHRR 1320
Score = 34.7 bits (76), Expect = 0.13
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 359 KGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARHTRNHREKDTGAVYEC-- 416
+GC F SK + H + T+ CGK F+ + L H R H+++ +EC
Sbjct: 1220 EGCKMTFESKAKLQTHK--RNRCTHEG--CGKKFRAHKYLVLHQRVHKDE---RPFECSW 1272
Query: 417 RECNKTFASRDCYANHLRLSKKHAP 441
+ C+ TF + HLRL P
Sbjct: 1273 KGCSMTFKWQWARTEHLRLHTGERP 1297
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 43.2 bits (97), Expect = 4e-04
Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 321 QCDCCGKVFASKMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSG 380
+C CGK F L H R+ KE+ K++ S+V+ +KS S
Sbjct: 44 KCKICGKSFECYQALGGHQRIHRPIKEKLSKQEF-------SEVY-PRKSKLQKRPESSS 95
Query: 381 MTYPCPICGKLFQWKRNLARHTRNHR 406
Y C +CGK+F R L HT+ HR
Sbjct: 96 SCYECKVCGKIFGCYRGLGGHTKLHR 121
Score = 33.1 bits (72), Expect = 0.38
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Query: 285 LLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKYHLRVV-- 342
+++K + H +I + KL +H+ H + D C K+ S + + +
Sbjct: 493 IVSKPSSFEHAQEEKILQCVEPKLEFHEQLAHSGFDKFDTCSKIRFSALPSPPEAKKIVS 552
Query: 343 -PQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARH 401
P + E EK+ + K+ S+ AH+ + +Y ICGK F + L H
Sbjct: 553 QPPSFEVSVDEKILYRAE--PKLNFSEPL--AHSCFDNSSSYRSIICGKSFVCSQALGGH 608
Query: 402 TRNHR 406
HR
Sbjct: 609 QTLHR 613
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 385 CPICGKLFQWKRNLARHTRNHRE 407
C ICGK F + L H R HRE
Sbjct: 200 CKICGKSFVCSQGLGNHKRVHRE 222
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 377 VHSGMTYPCPICGKLFQWKRNLARHTRNHR 406
+ S ++ C ICGK F+ + L H R HR
Sbjct: 37 LQSKSSHKCKICGKSFECYQALGGHQRIHR 66
Score = 28.7 bits (61), Expect = 8.3
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Query: 358 CKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLF--QWKRNLARHTR-NHREKDTGAVY 414
CK C K F ++ H +H PI KL ++ R ++ R + + + Y
Sbjct: 45 CKICGKSFECYQALGGHQRIHR------PIKEKLSKQEFSEVYPRKSKLQKRPESSSSCY 98
Query: 415 ECRECNKTFASRDCYANHLRLSK 437
EC+ C K F H +L +
Sbjct: 99 ECKVCGKIFGCYRGLGGHTKLHR 121
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 43.2 bits (97), Expect = 4e-04
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C+VCN NL LH+ H + + K + N K ++ C G V
Sbjct: 94 CEVCNKGFQRDQNLQLHKRGHNLPWKLKQRSN--KDVVRKKVYVCPEPGCVHHHPSRALG 151
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C+ CSK + + ++AHA Y C CG LF + +
Sbjct: 152 DLTGIKKHFFRKHGEKKW-KCEKCSKKYAVQSDWKAHAKTCGTKEYKCD-CGTLFSRRDS 209
Query: 398 LARH 401
H
Sbjct: 210 FITH 213
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 42.3 bits (95), Expect = 6e-04
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C++CN NL LHR H + + + K N P+ C V
Sbjct: 65 CEICNKGFQRDQNLQLHRRGHNLPWKLRQKSNKEVKKKVYVCPEVSC---VHHDPSRALG 121
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C CSK + + ++AH+ + Y C CG LF + +
Sbjct: 122 DLTGIKKHFCRKHGEKKW-KCDKCSKKYAVQSDWKAHSKICGTKEYKCD-CGTLFSRRDS 179
Query: 398 LARH 401
H
Sbjct: 180 FITH 183
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 41.5 bits (93), Expect = 0.001
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 4/124 (3%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C+VCN NL LHR H + + K + N K ++ C V
Sbjct: 70 CEVCNKGFKRDQNLQLHRRGHNLPWKLKQRTN--KEQVKKKVYICPEKTCVHHDPARALG 127
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C CSK + ++AH+ + Y C CG LF K +
Sbjct: 128 DLTGIKKHFSRKHGEKKW-KCDKCSKKYAVMSDWKAHSKICGTKEYRCD-CGTLFSRKDS 185
Query: 398 LARH 401
H
Sbjct: 186 FITH 189
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 41.5 bits (93), Expect = 0.001
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C+VCN + NL LHR H + + K K N P+ C V
Sbjct: 84 CEVCNKGFQREQNLQLHRRGHNLPWKLKQKSNKEVRRKVYLCPEPSC---VHHDPARALG 140
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C CSK + + ++AH+ Y C CG +F + +
Sbjct: 141 DLTGIKKHYYRKHGEKKW-KCDKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTIFSRRDS 198
Query: 398 LARH 401
H
Sbjct: 199 YITH 202
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 41.1 bits (92), Expect = 0.001
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
CDVCN + NL LHR H + + K K P+ C V
Sbjct: 85 CDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTC---VHHDPSRALG 141
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C+ CSK + + ++AH+ Y C CG +F + +
Sbjct: 142 DLTGIKKHYYRKHGEKKW-KCEKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTIFSRRDS 199
Query: 398 LARH 401
H
Sbjct: 200 YITH 203
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 40.7 bits (91), Expect = 0.002
Identities = 32/124 (25%), Positives = 49/124 (39%), Gaps = 4/124 (3%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C++CN NL LHR H + + K K + ++ C V
Sbjct: 84 CEICNKGFQRDQNLQLHRRGHNLPW--KLKQRSKQEVIKKKVYICPIKTCVHHDASRALG 141
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C+ CSK + + ++AHA Y C CG LF K +
Sbjct: 142 DLTGIKKHYSRKHGEKKW-KCEKCSKKYAVQSDWKAHAKTCGTREYKCD-CGTLFSRKDS 199
Query: 398 LARH 401
H
Sbjct: 200 FITH 203
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 40.3 bits (90), Expect = 0.003
Identities = 32/125 (25%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQ-CDCCGKVFASKMTLK 336
C++CN NL LHR H + + KL ++K C G V
Sbjct: 63 CEICNKGFQRDQNLQLHRRGHNLPW----KLRQRSTKEVRKKVYVCPVSGCVHHDPSRAL 118
Query: 337 YHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKR 396
L + ++ K EK + C+ CSK + + ++AH+ + Y C CG LF +
Sbjct: 119 GDLTGIKKHFCRKHGEKKW-KCEKCSKKYAVQSDWKAHSKICGTKEYKCD-CGTLFSRRD 176
Query: 397 NLARH 401
+ H
Sbjct: 177 SFITH 181
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 40.3 bits (90), Expect = 0.003
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 5/124 (4%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C+VCN + NL LHR H + + K K P+ C V
Sbjct: 83 CEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPSC---VHHDPSRALG 139
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C CSK + + ++AH+ Y C CG LF + +
Sbjct: 140 DLTGIKKHYYRKHGEKKW-KCDKCSKRYAVQSDWKAHSKTCGTKEYRCD-CGTLFSRRDS 197
Query: 398 LARH 401
H
Sbjct: 198 FITH 201
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 39.9 bits (89), Expect = 0.003
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 4/124 (3%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C++CN + NL LH+ H + + K K N ++ ++ C V
Sbjct: 8 CEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQV--KKKVYICPEKSCVHHDPARALG 65
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C CSK + ++AH + + C CG LF K +
Sbjct: 66 DLTGIKKHFSRKHGEKKW-KCDKCSKKYAVISDWKAHNKICGSREFRCD-CGTLFSRKDS 123
Query: 398 LARH 401
H
Sbjct: 124 FISH 127
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 39.9 bits (89), Expect = 0.003
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Query: 342 VPQNKEEKPKEKLYIPCK--GCSKVFHSKKSYRAHAVVHSGMTYPCPI--CGKLFQWKRN 397
VP+ + E E L++ C GC K F + R H+ +H Y C CGK F
Sbjct: 66 VPEPEPEPTTEILFL-CSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLDSSK 124
Query: 398 LARHTRNHR-EKDTGAVYECRECNKTFASRDCYANHLR 434
L RH H E++ YE C K F+ +H++
Sbjct: 125 LKRHYLIHTGERNYICTYE--GCGKAFSLDFNLRSHMK 160
Score = 36.7 bits (81), Expect = 0.031
Identities = 33/112 (29%), Positives = 44/112 (39%), Gaps = 13/112 (11%)
Query: 306 SKLNYHKAAWHQEKPQCDC--CGKVFASKMTLKYHLRVVPQNKEEKPKEKLYI-PCKGCS 362
S L H + + CD CGK F LK H + E+ YI +GC
Sbjct: 94 SALRKHSHIHGERQYVCDQEGCGKKFLDSSKLKRHYLI-------HTGERNYICTYEGCG 146
Query: 363 KVFHSKKSYRAHAVVHSGMTYP-CPI--CGKLFQWKRNLARHTRNHREKDTG 411
K F + R+H HS Y CP C K + + L H + EK+ G
Sbjct: 147 KAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLKNHVAAYHEKNGG 198
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 39.9 bits (89), Expect = 0.003
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 325 CGKVFASKMTLKYHLRVVPQNKEEK-PKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTY 383
CGK F L+ H Q+ K + + GC K F +++ ++H +
Sbjct: 222 CGKAFKYPSQLQKH-----QDSHVKLDSVEAFCSEPGCMKYFTNEECLKSH-IRSCHQHI 275
Query: 384 PCPICGKLFQWKRNLARHTRNHREKDTGAVYEC--RECNKTFASRDCYANHLR 434
C ICG K+N+ RH R H E + +C C+ TF+ H++
Sbjct: 276 NCEICGSK-HLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMK 327
Score = 37.5 bits (83), Expect = 0.018
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 388 CGKLFQWKRNLARHTRNHREKDTGAVYECRE--CNKTFASRDCYANHLRLSKKH 439
CGK F++ L +H +H + D+ + C E C K F + +C +H+R +H
Sbjct: 222 CGKAFKYPSQLQKHQDSHVKLDSVEAF-CSEPGCMKYFTNEECLKSHIRSCHQH 274
Score = 35.5 bits (78), Expect = 0.072
Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 8/90 (8%)
Query: 322 CDCCGKVFASKMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGM 381
C CG F LK H+ Q+ + Y+ C+ + K H + H G
Sbjct: 68 CQECGAEFKKPAHLKQHM----QSHSLERSFTCYVD--DCAASYRRKDHLNRHLLTHKGK 121
Query: 382 TYPCP--ICGKLFQWKRNLARHTRNHREKD 409
+ CP C F + N+ RH + + D
Sbjct: 122 LFKCPKENCKSEFSVQGNVGRHVKKYHSND 151
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 39.9 bits (89), Expect = 0.003
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 10/113 (8%)
Query: 325 CGKVFASKMTLKYHLRVVPQNKEEK-PKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTY 383
CGK F L+ H Q+ K + + GC K F +++ ++H +
Sbjct: 134 CGKAFKYPSQLQKH-----QDSHVKLDSVEAFCSEPGCMKYFTNEECLKSH-IRSCHQHI 187
Query: 384 PCPICGKLFQWKRNLARHTRNHREKDTGAVYEC--RECNKTFASRDCYANHLR 434
C ICG K+N+ RH R H E + +C C+ TF+ H++
Sbjct: 188 NCEICGSK-HLKKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMK 239
Score = 37.5 bits (83), Expect = 0.018
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 388 CGKLFQWKRNLARHTRNHREKDTGAVYECRE--CNKTFASRDCYANHLRLSKKH 439
CGK F++ L +H +H + D+ + C E C K F + +C +H+R +H
Sbjct: 134 CGKAFKYPSQLQKHQDSHVKLDSVEAF-CSEPGCMKYFTNEECLKSHIRSCHQH 186
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 361 CSKVFHSKKSYRAHAVVHSGMTYPCP--ICGKLFQWKRNLARHTRNHREKD 409
C+ + K H + H G + CP C F + N+ RH + + D
Sbjct: 13 CAASYRRKDHLNRHLLTHKGKLFKCPKENCKSEFSVQGNVGRHVKKYHSND 63
>At5g59820.1 68418.m07500 zinc finger (C2H2 type) family protein
(ZAT12) identical to zinc finger protein ZAT12
[Arabidopsis thaliana] gi|1418325|emb|CAA67232
Length = 162
Score = 39.1 bits (87), Expect = 0.006
Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 16/87 (18%)
Query: 342 VPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVH---------SGM-------TYPC 385
V Q + +K CK C K FHS ++ H H SG+ ++PC
Sbjct: 25 VGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDALSSGLMKKVKTSSHPC 84
Query: 386 PICGKLFQWKRNLARHTRNHREKDTGA 412
PICG F + L H R HR + A
Sbjct: 85 PICGVEFPMGQALGGHMRRHRNESGAA 111
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 39.1 bits (87), Expect = 0.006
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C++CN NL LHR H + + K K Q+K + C + +
Sbjct: 84 CEICNKGFQRDQNLQLHRRGHNLPWKLKQKNTKE-----QQKKKVYVCPETNCAHHHPSR 138
Query: 338 HLRVVPQNKEE---KPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQW 394
L + K+ K EK + C+ CSK + + ++AH + Y C CG LF
Sbjct: 139 ALGDLTGIKKHFCRKHGEKKW-KCEKCSKFYAVQSDWKAHTKICGTRDYRCD-CGTLFSR 196
Query: 395 KRNLARH 401
K H
Sbjct: 197 KDTFITH 203
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 39.1 bits (87), Expect = 0.006
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 4/124 (3%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C++CN NL LHR H + + K + N K ++ C V
Sbjct: 101 CEICNKGFQRDQNLQLHRRGHNLPWKLKQRSN--KEVIRKKVYVCPEASCVHHDPSRALG 158
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C CSK + + +AH+ Y C CG LF + +
Sbjct: 159 DLTGIKKHFCRKHGEKKW-KCDKCSKKYAVQSDCKAHSKTCGTKEYRCD-CGTLFSRRDS 216
Query: 398 LARH 401
H
Sbjct: 217 FITH 220
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 37.9 bits (84), Expect = 0.014
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 15/130 (11%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAY-MTKSKLN--YHKAAWHQEKPQC---DCCGKVFAS 331
C++CN NL +HR H++ + + K + N K + +P C + C
Sbjct: 72 CEICNQGFQRDQNLQMHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPC-HALGD 130
Query: 332 KMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKL 391
+ +K H R K K+ + C+ CSK + + Y+AH + C CG++
Sbjct: 131 LVGIKKHFR----RKHSNHKQWI---CERCSKGYAVQSDYKAHLKTCGTRGHSCD-CGRV 182
Query: 392 FQWKRNLARH 401
F + H
Sbjct: 183 FSRVESFIEH 192
Score = 29.1 bits (62), Expect = 6.3
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 384 PCPICGKLFQWKRNLARHTRNHREKDTGAVYECRECNKTFASRDCYANHLR 434
PC G L K++ R NH++ + C C+K +A + Y HL+
Sbjct: 124 PCHALGDLVGIKKHFRRKHSNHKQ------WICERCSKGYAVQSDYKAHLK 168
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 383 YPCPICGKLFQWKRNLARHTRNHR 406
Y C IC + FQ +NL H R H+
Sbjct: 70 YVCEICNQGFQRDQNLQMHRRRHK 93
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 37.5 bits (83), Expect = 0.018
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAY---MTKSKLNYHKAAWHQEKPQC---DCCGKVFAS 331
C++CN NL +HR H++ + + + K + +P C + C
Sbjct: 69 CEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPC-HALGD 127
Query: 332 KMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKL 391
+ +K H R K K+ + C+ CSK + + Y+AH + C CG++
Sbjct: 128 LVGIKKHFR----RKHSNHKQWV---CERCSKGYAVQSDYKAHLKTCGTRGHSCD-CGRV 179
Query: 392 FQWKRNLARHTRN 404
F + H N
Sbjct: 180 FSRVESFIEHQDN 192
Score = 29.5 bits (63), Expect = 4.7
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 384 PCPICGKLFQWKRNLARHTRNHREKDTGAVYECRECNKTFASRDCYANHLR 434
PC G L K++ R NH++ + C C+K +A + Y HL+
Sbjct: 121 PCHALGDLVGIKKHFRRKHSNHKQ------WVCERCSKGYAVQSDYKAHLK 165
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 37.5 bits (83), Expect = 0.018
Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 16/131 (12%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAY----MTKSKLNYHKAAWHQEKPQC---DCCGKVFA 330
C++CN NL +HR H++ + K K + +P C D C
Sbjct: 41 CEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRKRVYVCPEPTCLHHDPC-HALG 99
Query: 331 SKMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGK 390
+ +K H R K K+ + C+ CSK + + Y+AH + C CG+
Sbjct: 100 DLVGIKKHFR----RKHSVHKQWV---CERCSKGYAVQSDYKAHLKTCGSRGHSCD-CGR 151
Query: 391 LFQWKRNLARH 401
+F + H
Sbjct: 152 VFSRVESFIEH 162
Score = 28.7 bits (61), Expect = 8.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 383 YPCPICGKLFQWKRNLARHTRNHR 406
Y C IC + FQ +NL H R H+
Sbjct: 39 YVCEICNQGFQRDQNLQMHRRRHK 62
>At2g17180.1 68415.m01984 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 270
Score = 36.7 bits (81), Expect = 0.031
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Query: 317 QEKPQCDCCGKVFASKMTLKYHLRVVPQNKEEKPKEKLYI--PCKGCSKVFHSKKSYRAH 374
+E+ +CD C KVF S L H K + + P ++ K
Sbjct: 145 EERFECDGCKKVFGSHQALGGHRATHKDVKGCFANKNITEDPPPPPPQEIVDQDKGKSVK 204
Query: 375 AVVHSGMTYPCPICGKLFQWKRNLARHTRNHREKD 409
V SGM + C IC ++F + L H R H EKD
Sbjct: 205 LV--SGMNHRCNICSRVFSSGQALGGHMRCHWEKD 237
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 35.5 bits (78), Expect = 0.072
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 10/139 (7%)
Query: 272 GAGSHKCDVCNVYLLTKDNLLLHRSLHQIAYMT-KSKLNYHKAAWHQEKPQCDCCGKVFA 330
G C VCN +N+ +H H Y L K++ + C CC +
Sbjct: 97 GPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCK 156
Query: 331 SKMT------LKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYP 384
+ + LK R + + + K K + K C K F + +R H + G +
Sbjct: 157 NNIDHPRSKPLK-DFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEK-NCGKLWF 214
Query: 385 CPICGKLFQWKRNLARHTR 403
C +CG F+ KR+L H R
Sbjct: 215 C-VCGSDFKHKRSLKDHVR 232
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 34.3 bits (75), Expect = 0.17
Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 5/124 (4%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C+VC NL LHR H + + K + + P+ C V
Sbjct: 68 CEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTC---VHHHSSRALG 124
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C+ C+K + + ++AH+ Y C CG +F + +
Sbjct: 125 DLTGIKKHFCRKHGEKKW-TCEKCAKRYAVQSDWKAHSKTCGTREYRCD-CGTIFSRRDS 182
Query: 398 LARH 401
H
Sbjct: 183 FITH 186
Score = 29.1 bits (62), Expect = 6.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 385 CPICGKLFQWKRNLARHTRNH 405
C +CGK FQ +NL H R H
Sbjct: 68 CEVCGKGFQRDQNLQLHRRGH 88
>At3g49930.1 68416.m05460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 215
Score = 34.3 bits (75), Expect = 0.17
Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 8/96 (8%)
Query: 316 HQEKPQCDCCGKVFASKMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHA 375
HQ+ +C CGK F S L H + KP + + + + +
Sbjct: 90 HQKDYKCSVCGKSFPSYQALGGH-----KTSHRKP---VSVDVNNSNGTVTNNGNISNGL 141
Query: 376 VVHSGMTYPCPICGKLFQWKRNLARHTRNHREKDTG 411
V SG T+ C IC K F + L H R H + G
Sbjct: 142 VGQSGKTHNCSICFKSFPSGQALGGHKRCHYDGGNG 177
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 33.9 bits (74), Expect = 0.22
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 267 KHRPKGAGSHKCDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNY--HKAAWHQEKPQCDC 324
+ R K + CD C L + L HR+ H+ + S NY + + +C
Sbjct: 219 RKRGKKQSKYTCDTCGKVLRSYQALGGHRTSHKYKRLKISDKNYFGEDGPIVRRQYECQI 278
Query: 325 CGKVFASKMTLKYHLRV 341
C ++FAS L H ++
Sbjct: 279 CNRMFASGQALGGHKKI 295
>At3g46090.1 68416.m04987 zinc finger (C2H2 type) family protein
(ZAT7) identical to zinc finger protein ZAT7
[Arabidopsis thaliana] gi|1418341|emb|CAA67234; contains
Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 168
Score = 33.9 bits (74), Expect = 0.22
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 382 TYPCPICGKLFQWKRNLARHTRNHR-EKDTGAV 413
++PCPICG F + L H R HR EK +G++
Sbjct: 85 SHPCPICGVKFPMGQALGGHMRRHRNEKVSGSL 117
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 33.9 bits (74), Expect = 0.22
Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 321 QCDCCGKVFASKMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSG 380
+C+ C K F S L H + KP + + S + H + SG
Sbjct: 107 KCNVCEKAFPSYQALGGH----KASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASG 162
Query: 381 MTYPCPICGKLFQWKRNLARHTRNHREKDTG 411
+ C IC K+F + L H R H E + G
Sbjct: 163 KIHECSICHKVFPTGQALGGHKRCHYEGNLG 193
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 33.9 bits (74), Expect = 0.22
Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 5/124 (4%)
Query: 278 CDVCNVYLLTKDNLLLHRSLHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKY 337
C++C NL LHR H + + K + + P+ C V
Sbjct: 72 CEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSC---VHHHPTRALG 128
Query: 338 HLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRN 397
L + ++ K EK + C+ C+K + + ++AH+ Y C CG +F + +
Sbjct: 129 DLTGIKKHFCRKHGEKKW-KCEKCAKRYAVQSDWKAHSKTCGTREYRCD-CGTIFSRRDS 186
Query: 398 LARH 401
H
Sbjct: 187 FITH 190
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 385 CPICGKLFQWKRNLARHTRNH 405
C ICGK FQ +NL H R H
Sbjct: 72 CEICGKGFQRDQNLQLHRRGH 92
>At3g42860.1 68416.m04491 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 372
Score = 33.5 bits (73), Expect = 0.29
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 384 PCPICGKLFQWKRNLARHTRNHREKDTGAVYECRECNKT-FASRDCYA 430
PC CGK W R+ + K T A +C +C K SRDC A
Sbjct: 238 PCYKCGKEGHWARDCTVQSDTGPVKSTSAAGDCFKCGKPGHWSRDCTA 285
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 33.5 bits (73), Expect = 0.29
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 349 KPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARHTRNHREK 408
K K + C+ C KVF S ++ H H K+ + + + + ++K
Sbjct: 153 KKKRNKWFECETCEKVFKSYQALGGHRASHKK---------KIAETDQLGSDELKKKKKK 203
Query: 409 DTGAVYECRECNKTFASRDCYANHLR 434
T + +EC C K F S H R
Sbjct: 204 STSSHHECPICAKVFTSGQALGGHKR 229
Score = 29.5 bits (63), Expect = 4.7
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 14/85 (16%)
Query: 321 QCDCCGKVFASKMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSG 380
+C+ C KVF S L H + ++K E + K KKS +H
Sbjct: 161 ECETCEKVFKSYQALGGHRA----SHKKKIAETDQLGSDELKK--KKKKSTSSH------ 208
Query: 381 MTYPCPICGKLFQWKRNLARHTRNH 405
+ CPIC K+F + L H R+H
Sbjct: 209 --HECPICAKVFTSGQALGGHKRSH 231
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 33.1 bits (72), Expect = 0.38
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 401 HTRNHREKDTGAVYECRECNKTFASRDCYANHLRLSKK 438
H + E + VYEC+ CN+TF+S H KK
Sbjct: 100 HQKISSENSSFYVYECKTCNRTFSSFQALGGHRASHKK 137
Score = 28.7 bits (61), Expect = 8.3
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 321 QCDCCGKVFASKMTLKYHL---RVVPQNKEEKPKEKLYIPCKGCS--------KVFHSKK 369
+C C + F+S L H + + EEK + L P S KV S
Sbjct: 114 ECKTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSAL 173
Query: 370 SYRAHAVVH-SGMTYPCPICGKLFQWKRNLARHTRNHR 406
+ +A +++ + + C ICG F + L H R HR
Sbjct: 174 ASQASNIINKANKVHECSICGSEFTSGQALGGHMRRHR 211
>At2g18490.1 68415.m02155 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 251
Score = 32.7 bits (71), Expect = 0.51
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 342 VPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGM-TYPCPICGKLFQWKRNLAR 400
+P+ K YI C+ K ++ R H++ + Y CP C +F + A
Sbjct: 127 IPKPTMSIEKTTEYIDCEENEKSDDAQYDGRIHSLPYKKYGPYTCPKCNSIFDTSQKFAA 186
Query: 401 HTRNHREKDT 410
H +H + +T
Sbjct: 187 HMSSHYKSET 196
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 31.9 bits (69), Expect = 0.89
Identities = 34/143 (23%), Positives = 55/143 (38%), Gaps = 24/143 (16%)
Query: 322 CDCCGKVFASKMTLKYHLR------------VVPQNKEEK---PKEKLYIPC--KGCSKV 364
C CGK F L+ H+R + P ++++K +K Y C GC
Sbjct: 219 CQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGYSLKKHYYSCPQHGCRWN 278
Query: 365 FHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARH------TRNHREKDTGAVYECRE 418
+K +V+ + Y C K++ +R +H R H EK G +
Sbjct: 279 QRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTH-EKHCGDIKWVCS 337
Query: 419 CNKTFASRDCYANHLRLSKKHAP 441
C F+ +D +H+ L H P
Sbjct: 338 CGTKFSRKDKLMSHVSLFLGHVP 360
Score = 29.1 bits (62), Expect = 6.3
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 382 TYPCPICGKLFQWKRNLARHTRNHREKDTGAVYECRECNKTFASRD 427
T+ C ICGK F+ NL H R H G Y+ RE + S+D
Sbjct: 216 THYCQICGKGFKRDANLRMHMRAH-----GDEYKTREALISPTSQD 256
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 31.9 bits (69), Expect = 0.89
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 321 QCDCCGKVFASKMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSG 380
+C+ CGKVF S L H +N+ K + S+ Y + VV +
Sbjct: 174 KCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQ-----------RSETEYD-NVVVVAK 221
Query: 381 MTYPCPICGKLFQWKRNLARHTRNH 405
+ CPIC ++F + L H R+H
Sbjct: 222 RIHECPICLRVFASGQALGGHKRSH 246
>At3g53600.1 68416.m05920 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 175
Score = 31.9 bits (69), Expect = 0.89
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 258 RLMCDHMEGKHRPKGAGSHKCDVCNVYLLTKDNLLLHRSLHQIAYMTKSKL 308
+L+ D + KHR K HKC +C+ T L H H+ + +T+ +
Sbjct: 75 KLIVDQEQVKHRNKENDMHKCTICDQMFGTGQALGGHMRKHRTSMITEQSI 125
>At3g46080.1 68416.m04986 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 164
Score = 31.9 bits (69), Expect = 0.89
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 382 TYPCPICGKLFQWKRNLARHTRNHREK 408
++PCPICG F + L H R HR +
Sbjct: 84 SHPCPICGVEFPMGQALGGHMRRHRSE 110
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 31.9 bits (69), Expect = 0.89
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 348 EKPKEKLYIPCKGCSKVFHSKKSYRAHAVVH---SGMTYPCPICGKLFQWKRNLARHTRN 404
E+ KE ++ CK C K F S K+ H +H + + Y +L ++ +A+ ++
Sbjct: 2 EEGKENSFL-CKYCYKTFPSGKALGGHIRIHTNENSVGYNGNKKKRLVDQRKMMAQ--KH 58
Query: 405 HREKDTGAVYECRECNKTFASRDCYANHL 433
+++ G CREC + F S H+
Sbjct: 59 KQQQQVG----CRECGRVFVSLKALRGHM 83
Score = 31.9 bits (69), Expect = 0.89
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 340 RVVPQNK--EEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVH 378
R+V Q K +K K++ + C+ C +VF S K+ R H H
Sbjct: 46 RLVDQRKMMAQKHKQQQQVGCRECGRVFVSLKALRGHMACH 86
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 358 CKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARHTR 403
C+ C K F + +R H + G + C ICG F+ KR+L H +
Sbjct: 303 CRKCGKAFAVRGDWRTHEK-NCGKLWYC-ICGSDFKHKRSLKDHIK 346
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 405 HREKDTGAVYECRECNKTFASRDCYANHLRLSKK 438
H E T +EC+ CNK F+S H KK
Sbjct: 38 HTESHTSNQFECKTCNKRFSSFQALGGHRASHKK 71
Score = 29.9 bits (64), Expect = 3.6
Identities = 29/114 (25%), Positives = 43/114 (37%), Gaps = 16/114 (14%)
Query: 297 LHQIAYMTKSKLNYHKAAWHQEKPQCDCCGKVFASKMTLKYHLRVVPQNKEEKPKEKLYI 356
L Q + + + LN H + + +C C K F+S L H + K KL +
Sbjct: 24 LAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGH-------RASHKKPKLTV 76
Query: 357 PCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARHTRNHREKDT 410
K V H Y+ + + C IC + F + L H R HR T
Sbjct: 77 EQKD---VKHLSNDYKGNHF------HKCSICSQSFGTGQALGGHMRRHRSSMT 121
>At4g04695.1 68417.m00689 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calcium-dependent protein
kinase [Lycopersicon esculentum]
gi|19171502|emb|CAC87494; contains protein kinase
domain, Pfam:PF00069; contains EF hand domain
(calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 484
Score = 31.1 bits (67), Expect = 1.6
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 326 GKVFASKMTLKYHLRVVPQNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPC 385
GK +A K LK +L+ + K + ++ G + KK+Y VH M Y C
Sbjct: 51 GKTYACKTILKTNLKSREDEEAVKREIRIMKHLSGEPNIVEFKKAYEDRDSVHIVMEY-C 109
Query: 386 PICGKLFQWKRNLARHTRNHREKD 409
G+LF+ L++ +++ EK+
Sbjct: 110 G-GGELFKKIEALSKDGKSYSEKE 132
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 31.1 bits (67), Expect = 1.6
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 358 CKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARHTR 403
C+ C K F K +R H + G + C CG F+ KR+L H +
Sbjct: 342 CRRCGKAFAVKGDWRTHE-KNCGKLWYCS-CGSDFKHKRSLKDHVK 385
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 31.1 bits (67), Expect = 1.6
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 317 QEKPQCDCCGKVFASKMTLKYHLRV--VPQNKEEKPKE--KLYIPCKGCSKVFHSKKSYR 372
Q K C C K F+S H+R+ + N + K K+ K+ + K K+ KK
Sbjct: 46 QRKHFCVICEKQFSSGKAYGGHVRIHSIEYNNKGKMKKMKKMKLKKKKKRKIGLVKKEKE 105
Query: 373 AH---AVVHSGMTYPCPICGKLFQWKRNLARHTRNHREK 408
A C +CGK FQ +L H R H ++
Sbjct: 106 KEIDLARTDVEGKIRCCLCGKEFQTMHSLFGHMRRHPDR 144
Score = 28.7 bits (61), Expect = 8.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 344 QNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHS 379
++++E P+ + C C K F S K+Y H +HS
Sbjct: 37 EDEDESPQPQRKHFCVICEKQFSSGKAYGGHVRIHS 72
>At4g34990.1 68417.m04961 myb family transcription factor (MYB32)
similar to myb DNA-binding protein GI:19052 from
[Hordeum vulgare]
Length = 274
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 225 SEMWVVRKNDVENEYFQSLKYKCSDCLIGF-NTARLMCDHMEGKHRPKGAGSH 276
S W + +D N F +KY+CS C GF N C++++ + + S+
Sbjct: 192 SPPWQDKLHDERNLRFGRVKYRCSACRFGFGNGKECSCNNVKCQTEDSSSSSY 244
>At2g45120.1 68415.m05615 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 314
Score = 30.7 bits (66), Expect = 2.0
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 262 DH-MEGKHRPKGAGSHKCDVCNVYLLTKDNLLLHRSLHQ--IAYMTKS---KLNYHKAAW 315
DH E K G KC+ C + L HR+ H+ A MTK+ + Y
Sbjct: 179 DHDSEDYKSSKSRGRFKCETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVK 238
Query: 316 HQEKPQCDCCGKVFASKMTLKYHLR 340
++ +C C +VF S L H R
Sbjct: 239 EKKVHECPICFRVFTSGQALGGHKR 263
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 358 CKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARHTR 403
C+ C K F K +R H + G + C CG F+ KR+L H +
Sbjct: 264 CRMCGKAFAVKGDWRTHE-KNCGKLWYCS-CGSDFKHKRSLKDHVK 307
Score = 29.5 bits (63), Expect = 4.7
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 7/65 (10%)
Query: 378 HSGMTYPCPICGKLFQWKRNLARHTRNHREKDTGAVYECRECNKTFASRDCYANHLR-LS 436
H + C +CGK F K + H EK+ G ++ C C F + +H++
Sbjct: 257 HGSKPFACRMCGKAFAVKGDWRTH-----EKNCGKLWYC-SCGSDFKHKRSLKDHVKAFG 310
Query: 437 KKHAP 441
H P
Sbjct: 311 NGHVP 315
>At1g49900.1 68414.m05596 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 917
Score = 30.7 bits (66), Expect = 2.0
Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Query: 344 QNKEEKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARHTR 403
Q + PK L+ C C KVF S ++ H HS G + TR
Sbjct: 182 QTQTAPPKSDLF-KCSICEKVFTSYQALGGHKASHSIKAAQLENAGA------DAGEKTR 234
Query: 404 NHREKDTGAVYECRECNKTFASRDCYANHLR 434
+ +G +++C C+ F + H R
Sbjct: 235 SKMLSPSGKIHKCDICHVLFPTGQALGGHKR 265
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 30.3 bits (65), Expect = 2.7
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 28/142 (19%)
Query: 322 CDCCGKVFASKMTLKYHL-------RVVPQN-KEEKPKEKLYIPC----KGC-SKVFHSK 368
C C K F L+ H+ R P++ K +P+ L IPC +GC + + H +
Sbjct: 147 CHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPR 206
Query: 369 ----KSYRA----HAVVHSGMTYPCPICGKLFQWKRNLARHTRNHREKDTGAVYECRECN 420
K +R + H + C +CGKL K + H EK+ G + C C
Sbjct: 207 SKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTH-----EKNCGKRWVC-VCG 260
Query: 421 KTFASRDCYANHLR-LSKKHAP 441
F + +H++ H P
Sbjct: 261 SDFKHKRSLKDHVKAFGSGHGP 282
>At3g07000.1 68416.m00831 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 574
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 348 EKPKEKLYIPCKGCSKVFHSKKSYRAHAVVHS--GMTYPCPIC 388
++PK+K+ IPC H +SY AV + G+ Y C C
Sbjct: 10 DQPKQKVKIPCNHMLLYIHLTQSYSYCAVCNGDYGLCYYCSRC 52
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.9 bits (64), Expect = 3.6
Identities = 36/143 (25%), Positives = 50/143 (34%), Gaps = 24/143 (16%)
Query: 322 CDCCGKVFASKMTLKYHLR-----------VVPQNKEEKP-KEKLYI-----PCKGCSKV 364
C CGK F L+ H+R + NKE P E + I P GC +
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRN 305
Query: 365 FHSKKSYRAHAVVHSGMTYPCPICGKLFQWKR------NLARHTRNHREKDTGAVYECRE 418
KK ++ Y C K F R ++ + H EK G
Sbjct: 306 KEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTH-EKHCGKNKWLCS 364
Query: 419 CNKTFASRDCYANHLRLSKKHAP 441
C TF+ +D H+ L + H P
Sbjct: 365 CGTTFSRKDKLFGHIALFQGHTP 387
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 382 TYPCPICGKLFQWKRNLARHTRNHREK 408
T+ C ICGK F+ NL H R H ++
Sbjct: 243 THFCTICGKGFKRDANLRMHMRGHGDE 269
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 29.9 bits (64), Expect = 3.6
Identities = 36/143 (25%), Positives = 50/143 (34%), Gaps = 24/143 (16%)
Query: 322 CDCCGKVFASKMTLKYHLR-----------VVPQNKEEKP-KEKLYI-----PCKGCSKV 364
C CGK F L+ H+R + NKE P E + I P GC +
Sbjct: 246 CTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKESVPGSEPMLIKRYSCPFLGCKRN 305
Query: 365 FHSKKSYRAHAVVHSGMTYPCPICGKLFQWKR------NLARHTRNHREKDTGAVYECRE 418
KK ++ Y C K F R ++ + H EK G
Sbjct: 306 KEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTH-EKHCGKNKWLCS 364
Query: 419 CNKTFASRDCYANHLRLSKKHAP 441
C TF+ +D H+ L + H P
Sbjct: 365 CGTTFSRKDKLFGHIALFQGHTP 387
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 382 TYPCPICGKLFQWKRNLARHTRNHREK 408
T+ C ICGK F+ NL H R H ++
Sbjct: 243 THFCTICGKGFKRDANLRMHMRGHGDE 269
>At5g22920.1 68418.m02680 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles:PF05495 CHY zinc
finger, PF00097 zinc finger, C3HC4 type (RING finger)
Length = 291
Score = 29.5 bits (63), Expect = 4.7
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 352 EKLYIPCKGCSKVFHSKKSYRAHAVVHSGMTYPCPICGK-LFQWKRNL----ARHTRNHR 406
E+ + CK C + +SK H V M + CP+C + LF R++ HT H
Sbjct: 131 EENFFHCKRC-RCCYSKIMEDKHQCVEGAMHHNCPVCFEYLFDSTRDITVLRCGHTM-HL 188
Query: 407 E--KDTGA--VYECRECNKT 422
E KD G Y C C+K+
Sbjct: 189 ECTKDMGLHNRYTCPVCSKS 208
>At3g46690.1 68416.m05068 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 452
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 18 VGCLNYNRRMFCCNEVKECFKLLGNIDVPDGLTVQVCWECFAAIRTVKRF 67
+ C+ Y++ M+ C + FK+ I T+QVC+ C + + ++F
Sbjct: 107 IACIIYDKLMYFCEAAAKEFKIPSVIFSTSSATIQVCY-CVLSELSAEKF 155
>At5g41170.1 68418.m05004 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 527
Score = 29.1 bits (62), Expect = 6.3
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 13 VNGICV-GCLNYNRRMFCCNEVKECF 37
+NG C+ GC++ R+MF E K CF
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCF 314
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 29.1 bits (62), Expect = 6.3
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 365 FHSKKSYRAHAVVHSGMTYPCPICGKLFQWKRNLARHTRNHREKDTGA-VYECRECNKTF 423
F +KK + + G+ Y C C K F + L H +H++ GA V++C E
Sbjct: 101 FSNKKPVASLGLGLDGV-YQCKTCDKSFHSFQALGGHRASHKKPKLGASVFKCVEKKTAS 159
Query: 424 AS 425
AS
Sbjct: 160 AS 161
>At3g09290.1 68416.m01103 zinc finger (C2H2 type) family protein ;
contains Pfam profile: PF00096 Zinc finger, C2H2 type
Length = 172
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 235 VENEYFQSLKYKCSDCLIGFNTARLMCDHMEGKHRPK 271
V++ QS Y CS C+ GF+ A+ + HM R +
Sbjct: 25 VDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDR 61
>At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 353
Score = 29.1 bits (62), Expect = 6.3
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 402 TRNHREKDTGAVYECRECNKTFASRDCYANHLRLS 436
TR R K + C+EC K F C NHL+++
Sbjct: 68 TRRRRNKKI--LIRCKECGKGFLYEKCLFNHLQVT 100
>At5g04390.1 68418.m00431 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 362
Score = 28.7 bits (61), Expect = 8.3
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 392 FQWKRNLARHTRNHREKDTGAVYECRECNKTFASRDCYANHLRLSKK 438
F +R L + N K VY+C+ C++TF S H KK
Sbjct: 131 FTSRRFLETSSSNSGGKAGYYVYQCKTCDRTFPSFQALGGHRASHKK 177
>At1g02040.1 68414.m00124 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 324
Score = 28.7 bits (61), Expect = 8.3
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 406 REKDTGAVYECRECNKTFASRDCYANHLRLSKK 438
+++ T V++C+ C K F S H KK
Sbjct: 142 KKQKTAQVFQCKACKKVFTSHQALGGHRASHKK 174
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.321 0.135 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,220,977
Number of Sequences: 28952
Number of extensions: 413296
Number of successful extensions: 1308
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 1102
Number of HSP's gapped (non-prelim): 212
length of query: 446
length of database: 12,070,560
effective HSP length: 83
effective length of query: 363
effective length of database: 9,667,544
effective search space: 3509318472
effective search space used: 3509318472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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