Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001610-TA|BGIBMGA001610-PA|IPR000591|Pleckstrin/
G-protein, interacting region, IPR000342|Regulator of G protein
signalling, IPR001770|G-protein, gamma subunit
(608 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16930.1 68418.m01984 AAA-type ATPase family protein contains... 38 0.026
At4g36580.1 68417.m05193 AAA-type ATPase family protein contains... 33 0.55
At5g20610.1 68418.m02448 expressed protein 32 0.96
At5g13340.1 68418.m01535 expressed protein 32 0.96
At5g27220.1 68418.m03247 protein transport protein-related low s... 32 1.3
At5g10680.1 68418.m01236 calmodulin-binding protein-related cont... 32 1.3
At3g03060.1 68416.m00302 AAA-type ATPase family protein contains... 32 1.3
At5g61210.1 68418.m07678 SNAP25 homologous protein SNAP33 (SNAP3... 31 1.7
At1g31140.1 68414.m03810 MADS-box protein (AGL63) similar to gb|... 31 1.7
At5g51280.1 68418.m06357 DEAD-box protein abstrakt, putative 31 2.2
At5g46450.1 68418.m05721 disease resistance protein (TIR-NBS-LRR... 31 2.9
At2g46180.1 68415.m05742 intracellular protein transport protein... 31 2.9
At2g37370.1 68415.m04583 hypothetical protein 31 2.9
At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing ... 31 2.9
At2g18330.1 68415.m02136 AAA-type ATPase family protein contains... 31 2.9
At5g08010.1 68418.m00932 expressed protein condensin subunit SMC... 30 3.9
At3g54220.1 68416.m05993 scarecrow transcription factor, putativ... 30 3.9
At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal hydrolase-r... 30 3.9
At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam PF05... 30 3.9
At1g04700.1 68414.m00467 protein kinase family protein low simil... 30 5.1
At3g58220.1 68416.m06491 meprin and TRAF homology domain-contain... 29 6.8
At3g52900.1 68416.m05830 expressed protein contains Pfam profile... 29 6.8
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 29 6.8
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 29 6.8
At5g60100.1 68418.m07535 pseudo-response regulator 3 (APRR3) ide... 29 9.0
At4g32560.2 68417.m04635 paramyosin-related contains weak simila... 29 9.0
At4g32560.1 68417.m04634 paramyosin-related contains weak simila... 29 9.0
At3g42723.1 68416.m04459 hypothetical protein 29 9.0
>At5g16930.1 68418.m01984 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 644
Score = 37.5 bits (83), Expect = 0.026
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 291 ESEDEIQRNNQENVIKENGESS--KEIPSGSTDPAVNIEQEIEAARKQLGMLRARMERRN 348
++E+E QR + ++K ES+ +E+ +T E+EI+A R+Q +A +ER
Sbjct: 178 QAENEAQRTRNQELVKMQEESAIRREVARRAT------EEEIQAQRRQTEREKAEIERET 231
Query: 349 IRVSKVAE 356
IRV +AE
Sbjct: 232 IRVKAMAE 239
>At4g36580.1 68417.m05193 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 620
Score = 33.1 bits (72), Expect = 0.55
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 290 QESEDEIQRNNQENVIKENGESSKEIPSGSTDPAVNIEQEIEAARKQLGMLRARMERRNI 349
Q+++ E QR++ ++K SS + E++I+A +Q RA +ER I
Sbjct: 161 QQTDHEAQRHHNVELVKMQEASSIRKEKAK----IATEEQIQAQHRQTEKERAELERETI 216
Query: 350 RVSKVAE 356
RV +AE
Sbjct: 217 RVKAMAE 223
>At5g20610.1 68418.m02448 expressed protein
Length = 1164
Score = 32.3 bits (70), Expect = 0.96
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 283 IVTITNAQESEDEIQRNNQENVIKENGESSKEIPSGSTDPAVNIEQEIEAARKQLGMLRA 342
IVT A E ++I N+E+V+ ++ E E+ +G D I +++E+A K + ML A
Sbjct: 460 IVTEELAPEEGNKISPKNEESVVPKDAE---EVMNGEKDLKEMIMKDLESALKSVEMLEA 516
>At5g13340.1 68418.m01535 expressed protein
Length = 242
Score = 32.3 bits (70), Expect = 0.96
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 172 KRTMQNKARLELADYEAESLAKLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQE 231
K+ ++KARL+ +EAE ++ R E + E + K ++ ++++ER+ ++ E
Sbjct: 74 KKEQEDKARLQ---HEAELKRLEEETAQRIEEAVRKNVEERMKTEEVKEEIERRTKEAYE 130
Query: 232 RAFWDV 237
+ F DV
Sbjct: 131 KMFLDV 136
>At5g27220.1 68418.m03247 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1181
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 189 ESLAKLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAFWDVHRPMPGCVNTT 248
ESL + +K K + I +++E DKK D E + LD ++ + + CV
Sbjct: 563 ESLTEHEKELGLKKKQIHVRSEKIELKDKKLDAREER-LDKKDEQLKSAEQKLAKCVKEY 621
Query: 249 ELDPRKLS 256
EL+ +KL+
Sbjct: 622 ELNAKKLA 629
>At5g10680.1 68418.m01236 calmodulin-binding protein-related
contains weak similarity to calmodulin-binding proteins
Length = 241
Score = 31.9 bits (69), Expect = 1.3
Identities = 38/184 (20%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 172 KRTMQNKARL-ELADYEAESLAKLQKMFSRKWEFIFMQA-----EAQSKVDKKRDKLERK 225
K T+ + RL EL + ++L + ++WE++ A E +D++R++ E K
Sbjct: 50 KPTIADLTRLPELLSLTQQGSSQLTNLV-KQWEYMQNNAVRLLREELKNLDRQREEAEAK 108
Query: 226 VLDSQERAFWDVHRPMPGCV--NTTEL-----DPRKLSRINALKAKRLKQCQDLVLQNNL 278
L E ++ H+P V T++L R+ +++ K + ++ + +
Sbjct: 109 ELKIIEEYNFESHQPEYVSVLDETSDLFRGFRQKRREVLVDSKKIEIYEEFDSKKVDDEE 168
Query: 279 KNNPIVTITNAQES---EDEIQRNNQENVIKENGESSKEIPSGSTDPAVNIEQEIEAARK 335
+ + T T+ E+ E Q +E +KE S + + + IE+ E K
Sbjct: 169 NSETVATTTDMNEAVNFEKSKQEEQEEAEVKEEESESSRVKEETAETKAQIEELPEEGTK 228
Query: 336 QLGM 339
+ G+
Sbjct: 229 KEGV 232
>At3g03060.1 68416.m00302 AAA-type ATPase family protein contains a
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 639
Score = 31.9 bits (69), Expect = 1.3
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 292 SEDEIQRNNQENVIKENGESSKEIPSGSTDPAVNIEQEIEAARKQLGMLRARMERRNIRV 351
+E+E R + ++K +S+ I A E++I+A R+Q +A +ER IRV
Sbjct: 180 AENEFHRTRNQELVKMQEDSA--IRQEQARRAT--EEQIQAQRRQTEREKAEIERETIRV 235
Query: 352 SKVAE 356
+AE
Sbjct: 236 KAIAE 240
>At5g61210.1 68418.m07678 SNAP25 homologous protein SNAP33 (SNAP33)
(SNAP33B) / synaptosomal-associated protein SNAP25-like
1 / snap25a identical to SNAP25 homologous protein
SNAP33 (AtSNAP33) (Synaptosomal-associated protein
SNAP25-like 1) (SNAP-25 like protein 1) (Snap25a)
(Swiss-Prot:Q9S7P9) [Arabidopsis thaliana]
Length = 300
Score = 31.5 bits (68), Expect = 1.7
Identities = 56/204 (27%), Positives = 85/204 (41%), Gaps = 16/204 (7%)
Query: 157 NQWEPENTDYAVYLCKRTMQN-KARLELADYEAESLAKLQKMFSRKWEFIFMQAEAQSKV 215
NQ E YAVY + T ++ + L++A+ + M + E I ++
Sbjct: 95 NQSVQELEGYAVYKAEETTKSVQGCLKVAEDIRSDATRTLVMLHDQGEQITRTHHKAVEI 154
Query: 216 DKKRDKLERKVLDSQERAF---WDVH--RPMPGCVNTTELDPRKLSRINALKAKRLKQCQ 270
D + E K+L S F W RP+ G V T + P + R+N L+ KR K
Sbjct: 155 DHDLSRGE-KLLGSLGGMFSKTWKPKKTRPINGPVVTRDDSPTR--RVNHLE-KREK--- 207
Query: 271 DLVLQNNLKNNPIVTITNAQESEDEIQRNNQENVIKENGESS-KEIPSGSTDPAVNIEQE 329
L L N+ T ES D QR E +++G S +I + AV++ E
Sbjct: 208 -LGL-NSAPRGQSRTREPLPESADAYQRVEMEKAKQDDGLSDLSDILGELKNMAVDMGSE 265
Query: 330 IEAARKQLGMLRARMERRNIRVSK 353
IE K L L ++ N RV +
Sbjct: 266 IEKQNKGLDHLHDDVDELNFRVQQ 289
>At1g31140.1 68414.m03810 MADS-box protein (AGL63) similar to
gb|Y15008 M79 protein (MADS box) from oryza sativa and
contains SRF transcription factor domain PF|00319
Length = 213
Score = 31.5 bits (68), Expect = 1.7
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 182 ELADYEAESLAKLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAFWDVHRPM 241
EL +E + LQ +RK EF+ Q + Q+ D+K E+ S E+ W R M
Sbjct: 124 ELLSFELHLESSLQHARARKSEFMHQQQQQQT--DQKLKGKEKGQGSSWEQLMWQAERQM 181
Query: 242 PGC 244
C
Sbjct: 182 MTC 184
>At5g51280.1 68418.m06357 DEAD-box protein abstrakt, putative
Length = 591
Score = 31.1 bits (67), Expect = 2.2
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 23 VKEEKDKEKRDNAITNLPPSVQALMAAIPSPEESPNYLIYKKMEALIEKMQDENTGVPVR 82
++EE DKEK A +L VQA PE S I + + ++E + D+ T + VR
Sbjct: 38 LEEEADKEKLAEAKPSL--LVQATQLKRDVPEVSATEQIILQEKEMMEHLSDKKTLMSVR 95
Query: 83 TVKSFMTKVPSVFTG 97
+ +T + TG
Sbjct: 96 ELAKGITYTEPLLTG 110
>At5g46450.1 68418.m05721 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1123
Score = 30.7 bits (66), Expect = 2.9
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 263 AKRLKQCQDLVLQNNLKNNPIVTITNAQESEDEIQRNNQ-ENVIKENGESSKEIPSG 318
++ LK+ DL L NLK + T+ E IQ NQ E + E E+ + +P G
Sbjct: 638 SENLKEIPDLSLATNLKKLDVSNCTSLVELSSTIQNLNQLEELQMERCENLENLPIG 694
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 245 VNTTELDPRKLSRINALKAKRLKQCQDLVLQNNLKNNPI---VTITNA--QESEDEIQRN 299
+N + ++ ++ A LK+ +D + + N +N + +T TNA +ES ++ R
Sbjct: 74 INKLQKSESEIKALSVNYAALLKEKEDQISRLNQENGSLKQNLTSTNAALKESRLDLSRA 133
Query: 300 NQENVIKENGESS 312
+ N IK NG+ S
Sbjct: 134 SNNNAIKGNGDHS 146
>At2g37370.1 68415.m04583 hypothetical protein
Length = 697
Score = 30.7 bits (66), Expect = 2.9
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 182 ELADYEAESLAKLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAFWDVHRPM 241
E D EA+ + L + + K F + Q E S+ D KR K +VLD ++ F + RP+
Sbjct: 547 EYLDLEAKFVTTLSVVDAMKKPF-YSQTEGISRKDDKRVKELFEVLDKTKQEFEAIERPL 605
>At2g22100.1 68415.m02625 RNA recognition motif (RRM)-containing
protein similar to UBP1 interacting protein 1a
[Arabidopsis thaliana] GI:19574236; contains Pfam
profile: PF00076 RNA recognition motif (aka RRM, RBD, or
RNP domain)
Length = 382
Score = 30.7 bits (66), Expect = 2.9
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 172 KRTMQNKARLELADYEAESLAKLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQE 231
K + K R E EAE LA +K S+K + + E K KK K E ++ +E
Sbjct: 10 KEKKEKKERKERKRREAEELAVREKKISKKHKSKSKEEEKPEKSKKKSKKYEE--VEEEE 67
Query: 232 RAFWDVHRPMPGCVNTTELDPRKLSRINALKAKRLKQCQDLVLQNNLKNNPIVTITNAQE 291
++ P P P+K S+ + K KR + ++ + PIVTI + +
Sbjct: 68 KS------PSP------SPSPKK-SKESKKKHKRSSDESEEIVDSKPVTVPIVTIES--D 112
Query: 292 SEDEIQRNNQENVIK 306
S+ E + + +N+++
Sbjct: 113 SDFEFDKEDIKNLLE 127
>At2g18330.1 68415.m02136 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family associated with
various cellular activities (AAA)
Length = 636
Score = 30.7 bits (66), Expect = 2.9
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 264 KRLKQCQDLVLQNNLKNNPIVTITNAQESEDEIQRNNQENVIKENGESSKEIPSGSTDPA 323
+ L Q Q NL+ + Q + +R+N E V + S ++ +
Sbjct: 138 RNLVQQQAQAKAQNLRYEDELARKRMQTDNEAQRRHNAELVSMQEASSIRKEKA-----R 192
Query: 324 VNIEQEIEAARKQLGMLRARMERRNIRVSKVAE 356
+ E++I+A +++ RA +ER IRV +AE
Sbjct: 193 IATEEQIQAQQRETEKERAELERETIRVKAMAE 225
>At5g08010.1 68418.m00932 expressed protein condensin subunit SMC4,
Drosophila melanogaster, EMBL:AF186472
Length = 566
Score = 30.3 bits (65), Expect = 3.9
Identities = 24/105 (22%), Positives = 48/105 (45%)
Query: 180 RLELADYEAESLAKLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAFWDVHR 239
RLE+ + KL +F + +F A+ + + D+ + + + +QER+
Sbjct: 288 RLEINMISSNIETKLSDVFELEPDFEVEFAQGELRDDQVERQRFDETVSNQERSSNSTPE 347
Query: 240 PMPGCVNTTELDPRKLSRINALKAKRLKQCQDLVLQNNLKNNPIV 284
V+ EL R L IN+ KR+K+ ++ + ++ K +V
Sbjct: 348 SGNYIVSPRELSLRLLGVINSCYEKRIKELENALQESQRKVEQLV 392
>At3g54220.1 68416.m05993 scarecrow transcription factor, putative
nearly identical to SCARECROW [Arabidopsis thaliana]
GI:1497987
Length = 653
Score = 30.3 bits (65), Expect = 3.9
Identities = 11/47 (23%), Positives = 28/47 (59%)
Query: 29 KEKRDNAITNLPPSVQALMAAIPSPEESPNYLIYKKMEALIEKMQDE 75
+++R+N+ T+ PP + + A +P+ + + + ++ E + + QDE
Sbjct: 239 QQERENSSTDAPPQPETVTATVPAVQTNTAEALRERKEEIKRQKQDE 285
>At2g27650.1 68415.m03351 ubiquitin carboxyl-terminal
hydrolase-related contains Pfam profiles PF04780:
Protein of unknown function (DUF629), PF04781: Protein
of unknown function (DUF627)
Length = 1106
Score = 30.3 bits (65), Expect = 3.9
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 379 NPWINYTTELWEQEKQSKDPLPLRRVRRWSFGLHELLQDPAGKEHFAKFLSKEFSGENLN 438
NP++++T L SKD L R W+ GLH L Q+ ++ K ++ G ++
Sbjct: 68 NPYVDFTYMLGSVGCYSKDVL---LSRPWAHGLHYLAQESGSVMYYKKCVNVAKQGLSVT 124
Query: 439 FGTVENIF 446
F F
Sbjct: 125 FPDASESF 132
>At1g22930.1 68414.m02866 T-complex protein 11 contains Pfam
PF05794: T-complex protein 11
Length = 1131
Score = 30.3 bits (65), Expect = 3.9
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 213 SKVDKKRDKLERKVLDSQERAFWD 236
S V + D L+R++ ++ ERAFWD
Sbjct: 674 STVKDEEDNLKRRIKETMERAFWD 697
>At1g04700.1 68414.m00467 protein kinase family protein low
similarity to EDR1 [Arabidopsis thaliana] GI:11127925;
contains Pfam profile: PF00069 Eukaryotic protein kinase
domain
Length = 1042
Score = 29.9 bits (64), Expect = 5.1
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 278 LKNNPIVTITNAQESEDEIQRNNQENVIKENGESSKEIPSGSTDPAVNIEQEIEAARKQL 337
L+ N V T+ E D+I NN E + E +KE+P+ + N + +A +KQ
Sbjct: 454 LRKNLRVVATSKWEDSDDIYFNNPEGKRCKELELTKEVPNSWINRDNNPDSFDQATKKQD 513
Query: 338 G 338
G
Sbjct: 514 G 514
>At3g58220.1 68416.m06491 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 487
Score = 29.5 bits (63), Expect = 6.8
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 8/96 (8%)
Query: 185 DYEAESLAKLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERAFWDVHRPMPGC 244
+YE+E ++K + R E ++EA+SK D + ER +S+E + D C
Sbjct: 246 EYESEPVSK-KDYEERPRESFEYESEAESKKDSEEGSRERYEYESEEESKKDSEN---DC 301
Query: 245 VNTTELDPRKLSRINALKAKRLKQCQDLVLQNNLKN 280
+E D + SR K++K+ D V N+ N
Sbjct: 302 GEESEKDSEEGSR----PLKKIKRNDDGVKSNDSVN 333
>At3g52900.1 68416.m05830 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 164
Score = 29.5 bits (63), Expect = 6.8
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 284 VTITNAQESEDEIQRNNQENVIKENGESSKEIPSGSTDPAVNIEQEIEAA----RKQLGM 339
V +T Q E+EI+R +KE + +T +E+E RK++GM
Sbjct: 34 VAVTRFQAREEEIERKKM--TVKEKVQQRLGFAEEATRCLTQTLEELEIMGDPMRKEVGM 91
Query: 340 LRARMERRNIRVSKVAETFVSYCEQYAE 367
+R +++ N + +A++ ++Y +
Sbjct: 92 VRKKIDMANRDIKSLAQSCQKKEKEYKD 119
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 29.5 bits (63), Expect = 6.8
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 7/90 (7%)
Query: 180 RLELADYEAESLAKLQKMFSRKWEFIFMQAEA----QSKVDKKRDKLERKVLDSQERAFW 235
R+E A +++SL + K +++ + ++ + E Q+K KK+ KLE V D Q+R
Sbjct: 259 RVEKAQDDSKSLDESLKELTKELQTLYKEKETVEAQQTKALKKKTKLELDVKDFQDRITG 318
Query: 236 DVHRPMPGC--VNTTELDPR-KLSRINALK 262
++ +NT E + + L + A+K
Sbjct: 319 NIQSKNDALEQLNTVEREMQDSLRELEAIK 348
>At1g76780.1 68414.m08935 expressed protein ; expression supported
by MPSS
Length = 1871
Score = 29.5 bits (63), Expect = 6.8
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 264 KRLKQCQDLVLQNNLKNNPIVTITNAQESEDEIQRNNQENVIKE-NGESSKEIPSGSTDP 322
K L++ Q + N+KN+ + + E + +IQ+ QE K+ G + K + +G
Sbjct: 474 KELREGQASEAEKNIKNDILKPVQKRSEGKHKIQKTFQEETNKQPEGYNEKIMETGKKIN 533
Query: 323 AVNIEQEIEAARKQLGMLRARMERRN 348
+ E R+Q AR E+ N
Sbjct: 534 EDGTRKVQEMIRQQELDEPARSEKEN 559
>At5g60100.1 68418.m07535 pseudo-response regulator 3 (APRR3)
identical to pseudo-response regulator 3 GI:10281008
from [Arabidopsis thaliana]
Length = 495
Score = 29.1 bits (62), Expect = 9.0
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 288 NAQESEDEIQRNNQENVIKENGESSKE--IPSGSTDPAVNIEQEIEAARK 335
NA+ S ++RNN + + + +G S E PS + + ++EQ ++ R+
Sbjct: 318 NAKYSVQALERNNDDTLNRSSGNSQVESKAPSSNREDLQSLEQTLKKTRE 367
>At4g32560.2 68417.m04635 paramyosin-related contains weak
similarity to Paramyosin (Swiss-Prot:P10567)
[Caenorhabditis elegans]
Length = 306
Score = 29.1 bits (62), Expect = 9.0
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 175 MQNKARLELADYEAESLAKLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERA 233
++ + E+ D + L L + EF+ ++E +S+ + KR LE V D +ERA
Sbjct: 58 LRERISKEVVDVSVQELIPLLRSLK---EFVKEESEVRSRCNVKRSALEDAVHDLEERA 113
>At4g32560.1 68417.m04634 paramyosin-related contains weak
similarity to Paramyosin (Swiss-Prot:P10567)
[Caenorhabditis elegans]
Length = 306
Score = 29.1 bits (62), Expect = 9.0
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 175 MQNKARLELADYEAESLAKLQKMFSRKWEFIFMQAEAQSKVDKKRDKLERKVLDSQERA 233
++ + E+ D + L L + EF+ ++E +S+ + KR LE V D +ERA
Sbjct: 58 LRERISKEVVDVSVQELIPLLRSLK---EFVKEESEVRSRCNVKRSALEDAVHDLEERA 113
>At3g42723.1 68416.m04459 hypothetical protein
Length = 806
Score = 29.1 bits (62), Expect = 9.0
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 271 DLVLQNNLKNNPIVTITNAQESEDEIQRNNQENVIKENGESSKEIPSGSTDPAVNIEQEI 330
D V N V +TN ++ EDE + NQE +K + E KE+ + + I ++
Sbjct: 597 DKVALKGESNVSCVEVTNDRDCEDEKRGENQE--MKLSTEYPKEVSWFNEFEQIGILVKM 654
Query: 331 EAARKQLGMLRARMERRNIRVS 352
+ R L ME+ N++ +
Sbjct: 655 QFTRPPEVFLGQVMEQENVKAT 676
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.131 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,768,257
Number of Sequences: 28952
Number of extensions: 638100
Number of successful extensions: 2235
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2222
Number of HSP's gapped (non-prelim): 35
length of query: 608
length of database: 12,070,560
effective HSP length: 85
effective length of query: 523
effective length of database: 9,609,640
effective search space: 5025841720
effective search space used: 5025841720
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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