GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001609-TA|BGIBMGA001609-PA|IPR002618|UTP--glucose-1-
phosphate uridylyltransferase
         (486 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   1.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   8.4  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   8.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 5/102 (4%)

Query: 151 KYGNEGKITWYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFD--FEGKIFL 208
           +Y + G +  Y+ T+        N  +  +Y   + N   +F   T    +  FE    +
Sbjct: 533 EYCSRGDLQTYLRTAWDK---FTNMQQQFAYIDESSNSSNYFANKTYDFHNMSFENDFII 589

Query: 209 DEKYHLSAAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSV 250
             K+ LS A     G+    KT+ +  D++ R +     H+V
Sbjct: 590 QPKHLLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTV 631


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 113 RLGFGHPKGMYDVGLPSRKTLFQI 136
           RL FG  + ++D  +PS  +L QI
Sbjct: 432 RLSFGRAEPVFDGKVPSNGSLNQI 455


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 113 RLGFGHPKGMYDVGLPSRKTLFQI 136
           RL FG  + ++D  +PS  +L QI
Sbjct: 257 RLSFGRAEPVFDGKVPSNGSLNQI 280


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.136    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,003
Number of Sequences: 317
Number of extensions: 4867
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 3
length of query: 486
length of database: 114,650
effective HSP length: 59
effective length of query: 427
effective length of database: 95,947
effective search space: 40969369
effective search space used: 40969369
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)