Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001609-TA|BGIBMGA001609-PA|IPR002618|UTP--glucose-1-
phosphate uridylyltransferase
(486 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0705 + 6231220-6231390,6231900-6231954,6232043-6232194,623... 297 2e-80
04_04_1136 - 31142742-31142806,31143245-31143325,31143432-311435... 257 1e-68
06_03_1285 - 28993305-28993442,28993559-28993798,28993881-289939... 60 5e-09
09_06_0214 + 21616019-21616086,21616205-21616252,21616336-216164... 33 0.51
08_02_1566 + 27909297-27909390,27909542-27909645,27912899-279130... 31 2.1
09_04_0593 - 18825741-18826702,18826994-18827875,18828687-188287... 31 2.7
07_03_1286 + 25482632-25482685,25483948-25484145,25484242-254844... 30 3.6
01_06_0495 - 29779499-29781325 30 4.7
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 29 6.3
07_03_0107 - 13470054-13470126,13471723-13471851,13472000-134720... 29 8.3
>08_01_0705 +
6231220-6231390,6231900-6231954,6232043-6232194,
6232252-6232335,6232614-6232797,6232885-6232988,
6233109-6233183,6233366-6233405,6233495-6233577,
6233687-6233764,6233868-6234011,6234093-6234160,
6234831-6234945,6235045-6235201,6235311-6235408
Length = 535
Score = 297 bits (728), Expect = 2e-80
Identities = 153/351 (43%), Positives = 222/351 (63%), Gaps = 17/351 (4%)
Query: 125 VGLPSRKTLFQIQAERILRVQQMAAEKYGNEGKITWYIMTSEHTKAPTANYFKSHSYFGL 184
+GLPS K+LFQ+QAERIL +Q++AA+ +I WYIMTS T T +F+SH YFGL
Sbjct: 187 IGLPSGKSLFQLQAERILCIQKLAAQSTDGTPQIHWYIMTSPFTDEATRKFFESHRYFGL 246
Query: 185 NENDVVFFEQGTLPCFDFEGKIFLDEKYHLSAAPDGNGGLYRALKTQGILDDISVRGIQH 244
+ V FF+QGT+PC +G+ ++ Y ++ APDGNGG+Y ALK+Q +LDD++ RG+++
Sbjct: 247 EPDQVTFFQQGTIPCVSADGRFIMETPYKVARAPDGNGGVYAALKSQRLLDDMAGRGVKY 306
Query: 245 LHAHSVDNILIKVADPVFIGYCKSKNADCAAKVVQKSSPSEPVGVVCR--VNGHYKVVEY 302
+ + VDN+L++VADP F+GY K AAKVV+K+ P E VGV + G VVEY
Sbjct: 307 VDCYGVDNVLVRVADPTFLGYFIDKGVSAAAKVVRKAYPQEKVGVFVQRGRGGPLSVVEY 366
Query: 303 SEL-TDEASERRNPDGRLTFSAGNICNHYFSADFLRKISN-FETKLKLHIAKKKIPYIDE 360
SE+ +E GRL + N+C H F+ DFL +++N E H+A+KKIP I
Sbjct: 367 SEMDAAMTTEINQGTGRLRYCWSNVCLHMFTLDFLNQVTNSLEKDSIYHLAEKKIPSI-- 424
Query: 361 NGVRQKPNEPNGIKMEKFIFDVFEFAENFICLEVARDTEFSALKNADTAKKDCPSTARED 420
+G G+K+E+FIFDVF ++ + E+ R+ EF+ +KNA+ A D P +AR
Sbjct: 425 HGYTA------GLKLEQFIFDVFTYSPSTALFEILREEEFAPVKNANGATYDTPDSARLM 478
Query: 421 LLQLHKKYIRQAGGEVADD-----ADIEISPLLSYGGENLDSIVNGKVFTA 466
LL+LH +++ AGG + +E+SPL SY GENL++I G+ F A
Sbjct: 479 LLRLHSRWVVAAGGFLTHSVPLYMTGVEVSPLSSYAGENLEAICRGRTFHA 529
Score = 52.0 bits (119), Expect = 1e-06
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
Query: 3 ETLLRNLKDHGQEHLIKYWSVLSEEQRKQLSDEILKLDLTEVHATFSRAIESTXXXXXXX 62
+ L+ LKD+GQE W L+ E+R L +I LDL A R + +
Sbjct: 23 QELVERLKDYGQEGAFALWDELAPEERDFLVRDIESLDL----ARIDRIVRCSLRSQGVP 78
Query: 63 XXXXXXXXXSHYESVPNLTPDKIEEYENIGFKEICNGKVGVLLLAGGQ 110
S +V + TP+ + + G K I GK+ V+LLAGGQ
Sbjct: 79 LPAVEPVPESSVSTVEDRTPEDKQRWWKRGLKAISEGKLAVVLLAGGQ 126
>04_04_1136 -
31142742-31142806,31143245-31143325,31143432-31143588,
31143695-31143809,31144016-31144083,31144171-31144314,
31144393-31144470,31144555-31144637,31144729-31144768,
31144993-31145067,31145202-31145314,31145839-31145878,
31145977-31146128,31146351-31146405,31146717-31146776,
31147005-31147268,31148379-31148436,31148606-31148637
Length = 559
Score = 257 bits (630), Expect = 1e-68
Identities = 136/322 (42%), Positives = 195/322 (60%), Gaps = 17/322 (5%)
Query: 154 NEGKITWYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFDFEGKIFLDEKYH 213
N I WYIMTS T T +F+S YFGL + V FF+QGTLPC +G+ ++ Y
Sbjct: 224 NTVPIHWYIMTSPFTDDITRKFFESRKYFGLEADQVTFFQQGTLPCVSADGRFIMETPYK 283
Query: 214 LSAAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADC 273
++ APDGNGG+Y ALK++ +L+D+S RG++++ + VDN L++VADP F+GY K
Sbjct: 284 VAKAPDGNGGVYAALKSRRLLEDMSSRGVKYVDCYGVDNALVRVADPTFLGYFIDKAVSS 343
Query: 274 AAKVVQKSSPSEPVGVVCR--VNGHYKVVEYSEL-TDEASERRNPDGRLTFSAGNICNHY 330
AAKVV+K+ P E VGV R G VVEYSE+ A+E GRL + NIC H
Sbjct: 344 AAKVVRKAYPQENVGVFVRRGRGGPLSVVEYSEMDAAMATEINQSTGRLRYCWSNICLHM 403
Query: 331 FSADFLRKISN-FETKLKLHIAKKKIPYIDENGVRQKPNEPNGIKMEKFIFDVFEFAENF 389
F+ DFL +++N E H+A+KKIP I + G+K+E++IFD F ++ +
Sbjct: 404 FTLDFLNQVANSLEKDSTYHLAEKKIPSIHGYAM--------GLKLEQYIFDAFSYSPST 455
Query: 390 ICLEVARDTEFSALKNADTAKKDCPSTAREDLLQLHKKYIRQAGGEVADD-----ADIEI 444
EV R+ EF+ +KNA+ A D P +A+ LL+LH +++ AGG + +E+
Sbjct: 456 ALFEVLREEEFAPVKNANGASYDTPDSAKLMLLRLHSRWVVAAGGFLTHSVPLYMTGVEV 515
Query: 445 SPLLSYGGENLDSIVNGKVFTA 466
SPL SY GENL++I G+ F A
Sbjct: 516 SPLSSYAGENLEAICRGRTFHA 537
Score = 47.2 bits (107), Expect = 3e-05
Identities = 40/141 (28%), Positives = 54/141 (38%), Gaps = 20/141 (14%)
Query: 3 ETLLRNLKDHGQEHLIKYWSVLSEEQRKQLSDEILKLDLTE-VHATFS------------ 49
+ +L +KD+GQE W LS E R+ L +I + +H F
Sbjct: 80 QAMLERMKDYGQEGAFALWDELSPEDRELLVRDIEVSERGRTLHKKFDFFSPFLAGILPS 139
Query: 50 -------RAIESTXXXXXXXXXXXXXXXXSHYESVPNLTPDKIEEYENIGFKEICNGKVG 102
R I + S V P+ E + G K I GK+
Sbjct: 140 LDLSRIDRIIRRSLGSQGFTLPTVEPVPESSVSKVEERLPEDKERWWKKGLKAISEGKLA 199
Query: 103 VLLLAGGQATRLGFGHPKGMY 123
V+LLAGGQ TRLG PKG +
Sbjct: 200 VVLLAGGQGTRLGSSDPKGCF 220
>06_03_1285 -
28993305-28993442,28993559-28993798,28993881-28993961,
28994370-28994429,28994523-28994628,28994861-28994921,
28995198-28995246,28995475-28995599,28995809-28995947,
28996432-28996503,28996615-28996742,28997037-28997136,
28997757-28997897,28998116-28998232,28998505-28998609,
28999037-28999153
Length = 592
Score = 59.7 bits (138), Expect = 5e-09
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 16/226 (7%)
Query: 5 LLRNLKDHGQEHLIKYWSV--LSEEQRKQLSDEILKLDLTEVHATFSRAIESTXXXXXXX 62
L + L GQ HL ++W + +++++ D++ +L+ + S +
Sbjct: 42 LAKLLLSEGQSHLFEHWPEPGVDDDKKRNFFDQVCRLNSSYPGGLASYIQNARKLLADSK 101
Query: 63 XXXXXXXXXSHYESVPN---LT--PDKIEEYENIGFKEICNGKVGVLLLAGGQATRLGFG 117
S SVP+ LT D E G KE + +L+AGG RLG+
Sbjct: 102 AGKNPYDGFS--PSVPSGEVLTFGDDNFVSLEEAGVKEARHA--AFVLVAGGLGERLGYK 157
Query: 118 HPKGMYDVGLPSRKTLFQIQAERILRVQQMAAEKYGNE--GKITWYIMTSEHTKAPTANY 175
K + K Q E IL +Q+ + + E KI + IMTS+ T A T
Sbjct: 158 GIKVALPRETTTGKCFLQHYIESILALQEASCKLVEGECNTKIPFVIMTSDDTNALTVKL 217
Query: 176 FKSHSYFGLNENDVVFFEQGTLPCF-DFEGKIFLD--EKYHLSAAP 218
+S+SYFG+ + V +Q + C D + ++ LD +KY + P
Sbjct: 218 LESNSYFGMEPSQVHILKQEKVACLADNDARLALDPNDKYKIQIFP 263
>09_06_0214 +
21616019-21616086,21616205-21616252,21616336-21616427,
21616555-21616645,21617660-21617720,21617810-21617887,
21617979-21618029,21618118-21618191,21618306-21618378,
21618762-21618819,21618899-21618969,21619045-21619110,
21619327-21619359,21619445-21619497,21619572-21619647,
21619729-21619785,21619874-21619957,21620037-21620135,
21620260-21620364,21620575-21620643,21621019-21621108
Length = 498
Score = 33.1 bits (72), Expect = 0.51
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 100 KVGVLLLAGGQATRLGFGHPKGMYDVGLPSRKTLFQIQAERILRVQQMAAEKYGNEGKIT 159
K+ VL L GG T +G PK + +V + F +++++ + +KYG +
Sbjct: 80 KLVVLKLNGGLGTTMGCTGPKSVIEV-----RNGFTFLDLIVIQIESLN-KKYGCN--VP 131
Query: 160 WYIMTSEHTKAPTANYFKSHSYFGLNEN-DVVFFEQGTLPCFDFEGKIFLDEKYHLSAA- 217
+M S +T T + +S N N ++ F Q P E + L K
Sbjct: 132 LLLMNSFNTHDDTQKIVEKYS----NSNIEIHTFNQSQYPRIVTEDFLPLPSKGKTGKDG 187
Query: 218 --PDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNI 253
P G+G ++ +L G LD + +G +++ + DN+
Sbjct: 188 WYPPGHGDVFPSLNNSGKLDTLLAQGKEYVFVANSDNL 225
>08_02_1566 +
27909297-27909390,27909542-27909645,27912899-27913098,
27913214-27913314,27913427-27914130,27914671-27914834,
27914941-27915100
Length = 508
Score = 31.1 bits (67), Expect = 2.1
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 424 LHKKYIRQAGGEVADDADIEISPLLSYGGENLDSIVNGKVFT 465
+ +K + AG + DD ++ PLL + +NLD IVNG T
Sbjct: 88 IEEKVVALAGDIIYDDLGLD-PPLLQHLADNLDVIVNGAATT 128
>09_04_0593 -
18825741-18826702,18826994-18827875,18828687-18828775,
18828942-18829080,18829405-18829531,18829629-18829838
Length = 802
Score = 30.7 bits (66), Expect = 2.7
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 395 ARDTEFSALKNADTAKKDCPSTAREDLLQLHKKYIRQAGGEVADDAD 441
AR S+ N ++ + D EDLL H + + AGG DAD
Sbjct: 59 ARSPSSSSSSNVNSGRGDDADNLLEDLLSKHGEVVYNAGGAPGIDAD 105
>07_03_1286 +
25482632-25482685,25483948-25484145,25484242-25484464,
25484762-25484958,25485150-25485237,25487103-25487197,
25487585-25487705,25487795-25487831,25487924-25487951,
25488175-25488327,25488666-25488768,25488868-25488932
Length = 453
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 144 VQQMAAEKYGNEGKITWYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFDFE 203
+Q+ A + T ++ + H+ + +A+Y + +D+ F Q C E
Sbjct: 129 IQECYARATSSGQSSTCHLGKNRHSPSRSADYECQKLVCFIYMSDMARFLQENYSCISVE 188
Query: 204 G--KIFLDEKYHLSAAPDGNGGLYRALKTQGILDD 236
G + F+DE+ S P+G R T +DD
Sbjct: 189 GSDQNFIDEETKGSGEPNGRCSKKRLKSTANTMDD 223
>01_06_0495 - 29779499-29781325
Length = 608
Score = 29.9 bits (64), Expect = 4.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 265 YCKSKNADCAAKVVQKSSPSEPVGVVCRVNGHYK 298
Y K+ + DCA KV + +P+ + C + G+ K
Sbjct: 130 YAKNGDMDCAVKVFDEMPVKDPIPMNCLITGYSK 163
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 29.5 bits (63), Expect = 6.3
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 121 GMYDVGLPSRKTLFQIQAERILRVQQMAAEKYGN-EGKITWYIMTSEHTKAPTANYFKSH 179
GM +P + ++ Q + VQQ AA+ Y N +G+ T+Y ++ ++ +
Sbjct: 608 GMQFAAMPQPR-MYGPQMSQYRLVQQQAAQYYSNSQGRPTYYAGMNDLSQKMYGLSMQDS 666
Query: 180 SYFGLNEN 187
SY G+N +
Sbjct: 667 SYMGMNSS 674
>07_03_0107 -
13470054-13470126,13471723-13471851,13472000-13472086,
13472480-13472524,13473121-13473240,13474010-13474086,
13474319-13474407,13474620-13474693,13475177-13475243,
13476427-13476478,13477272-13477307
Length = 282
Score = 29.1 bits (62), Expect = 8.3
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 160 WYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFDFEGKIFLDEKYHLSAAPD 219
++ S H T F+ YF + D +F + C D D + L A
Sbjct: 66 FFFSYSYHIMTRTTELFQKRIYFKESNQDWIFEKLPAYQCLDRISISAKDIMFTLIARRS 125
Query: 220 GN-GGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVA 258
+ G + + +L ++ R ++ +SV ++L+KVA
Sbjct: 126 RHFAGTRKPINVLDVLLKVAFRALRLTEFYSVLDVLLKVA 165
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.136 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,281,672
Number of Sequences: 37544
Number of extensions: 602523
Number of successful extensions: 1249
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1233
Number of HSP's gapped (non-prelim): 14
length of query: 486
length of database: 14,793,348
effective HSP length: 85
effective length of query: 401
effective length of database: 11,602,108
effective search space: 4652445308
effective search space used: 4652445308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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