Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001609-TA|BGIBMGA001609-PA|IPR002618|UTP--glucose-1-
phosphate uridylyltransferase
(486 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66495-3|CAA91270.2| 484|Caenorhabditis elegans Hypothetical pr... 307 1e-83
U50072-1|ABP49527.1| 378|Caenorhabditis elegans Hypothetical pr... 262 4e-70
U58727-2|AAB00582.2| 462|Caenorhabditis elegans Hypothetical pr... 48 2e-05
Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical p... 38 0.021
Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical pr... 38 0.021
Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical pr... 38 0.021
Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical pr... 38 0.021
Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical pr... 38 0.021
Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical pr... 34 0.26
AC006723-5|AAK68424.1| 575|Caenorhabditis elegans Hypothetical ... 30 3.2
AF039035-2|AAB94162.1| 304|Caenorhabditis elegans Hypothetical ... 29 5.6
Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical pr... 29 7.4
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 29 7.4
AL132949-36|CAI70419.1| 466|Caenorhabditis elegans Hypothetical... 29 7.4
AL132949-35|CAB61101.3| 574|Caenorhabditis elegans Hypothetical... 29 7.4
AF022976-16|AAC69076.2| 276|Caenorhabditis elegans Nuclear horm... 29 7.4
U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical pr... 29 9.7
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 29 9.7
>Z66495-3|CAA91270.2| 484|Caenorhabditis elegans Hypothetical
protein C36A4.4 protein.
Length = 484
Score = 307 bits (753), Expect = 1e-83
Identities = 176/453 (38%), Positives = 256/453 (56%), Gaps = 14/453 (3%)
Query: 13 GQEHLIKYWSVLSEEQRKQLSDEILKLDLTEVHATFSRAIESTXXXXXXXXXXXXXXXXS 72
G E L+ +++ LS+ ++ +L +I L+L+E H F I+S S
Sbjct: 17 GSEPLLNFYNELSDAEKSKLFHQISTLNLSEAHQWF---IDSADQRAPSTAEDLKPVLDS 73
Query: 73 HYESVPNLTPDKIEEYENIGFKEICNGKVGVLLLAGGQATRLGFGHPKGMYDVGLPSR-- 130
+ L ++ N G I G+V ++LAGGQATRLG PKG +G+ +
Sbjct: 74 QHFVQAELHQVILDGLWNKGMDAIGRGEVCAIVLAGGQATRLGSSQPKGTIPLGINASFG 133
Query: 131 KTLFQIQAERILRVQQMAAEK-YGNEGKITWYIMTSEHTKAPTANYFK---SHSYFGLNE 186
+L IQA +I +Q +A E+ + N GKI W +MTS T+ T + K +H F +E
Sbjct: 134 DSLLGIQAAKIALLQALAGEREHQNPGKIHWAVMTSPGTEEATREHVKKLAAHHGFDFDE 193
Query: 187 NDVVFFEQGTLPCFDFEGKIFLDEKYHLSAAPDGNGGLYRALKTQGILDDISVRGIQHLH 246
+ F Q + +D +G L K + AAP+GNGGLY A+ L + +GI++ H
Sbjct: 194 Q-ITIFSQDEIAAYDEQGNFLLGTKGSVVAAPNGNGGLYSAISAH--LPRLRAKGIKYFH 250
Query: 247 AHSVDNILIKVADPVFIGYCKSKNADCAAKVVQKSSPSEPVGVVCRVNGHYKVVEYSELT 306
+ VDNIL KVADP FIG+ S AD A K V K E VG VC G +VVEYSEL
Sbjct: 251 VYCVDNILCKVADPHFIGFAISNEADVATKCVPKQK-GELVGSVCLDRGLPRVVEYSELG 309
Query: 307 DEASERRNPDGRLTFSAGNICNHYFSADFLRKISNFETKLKLHIAKKKIPYIDENGVRQK 366
E +E++ PDG+ F AG+I NH+F+ DF+ ++ + ++L H A KKI Y++E G K
Sbjct: 310 AELAEQKTPDGKYLFGAGSIANHFFTMDFMDRVCSPSSRLPYHRAHKKISYVNEQGTIVK 369
Query: 367 PNEPNGIKMEKFIFDVFEFAENFICLEVARDTEFSALKNADTAKKDCPSTAREDLLQLHK 426
P +PNGIK+E+FIFDVFE ++ F EVAR+ EFS LKNA + DC ST + DL ++K
Sbjct: 370 PEKPNGIKLEQFIFDVFELSKRFFIWEVARNEEFSPLKNAQSVGTDCLSTCQRDLSNVNK 429
Query: 427 KYIRQAGGEV-ADDADIEISPLLSYGGENLDSI 458
++ + +V A + I + ++SY GENL +
Sbjct: 430 LWLERVQAKVTATEKPIYLKTIVSYNGENLQEL 462
>U50072-1|ABP49527.1| 378|Caenorhabditis elegans Hypothetical
protein K06B9.2 protein.
Length = 378
Score = 262 bits (642), Expect = 4e-70
Identities = 151/370 (40%), Positives = 214/370 (57%), Gaps = 24/370 (6%)
Query: 96 ICNGKVGVLLLAGGQATRLGFGHPKGMYDVGLPSRKTLFQIQAERILRVQQMAAEK-YGN 154
I G+V ++LAGGQATRLG +L IQA +I +Q +A E+ + N
Sbjct: 4 IGRGEVCAIVLAGGQATRLG--------------SNSLLGIQAAKIALLQALAGEREHQN 49
Query: 155 EGKITWYIMTSEHTKAPTANYFK---SHSYFGLNEN--DVVFFEQGTLPCFDFEGKIFLD 209
GKI W +MTS T+ T + K +H F +E + F Q + +D +G L
Sbjct: 50 PGKIHWAVMTSPGTEEATREHVKKLAAHHGFDFDEKMEKITIFSQDEIAAYDEQGNFLLG 109
Query: 210 EKYHLSAAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSK 269
K + AAP+GNGGLY A+ L + +GI++ H + VDNIL KVADP FIG+ S
Sbjct: 110 TKGSVVAAPNGNGGLYSAISAH--LPRLRAKGIKYFHVYCVDNILCKVADPHFIGFAISN 167
Query: 270 NADCAAKVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDEASERRNPDGRLTFSAGNICNH 329
AD A K V K E VG V G +VVEYSEL E +E++ PDG+ F AG+I NH
Sbjct: 168 EADVATKCVPKQK-GELVGSVFLDRGLPRVVEYSELGAELAEQKTPDGKYLFGAGSIANH 226
Query: 330 YFSADFLRKISNFETKLKLHIAKKKIPYIDENGVRQKPNEPNGIKMEKFIFDVFEFAENF 389
+F+ +F+ ++ + ++L H A KKI Y++E G KP PNGIK+E+FIFDVFE ++ F
Sbjct: 227 FFTMNFMDRVCSPSSRLPYHRAHKKISYVNEQGTIVKPENPNGIKLEQFIFDVFELSKRF 286
Query: 390 ICLEVARDTEFSALKNADTAKKDCPSTAREDLLQLHKKYIRQAGGEV-ADDADIEISPLL 448
EVAR+ EFS LKNA + DC ST + DL ++K ++ + +V A + I + ++
Sbjct: 287 FIWEVARNEEFSPLKNAQSVGTDCLSTCQRDLSNVNKLWLERVQAKVTATEKPIYLKTIV 346
Query: 449 SYGGENLDSI 458
SY GE+L +
Sbjct: 347 SYNGESLQEL 356
>U58727-2|AAB00582.2| 462|Caenorhabditis elegans Hypothetical
protein D1005.2 protein.
Length = 462
Score = 47.6 bits (108), Expect = 2e-05
Identities = 52/238 (21%), Positives = 98/238 (41%), Gaps = 20/238 (8%)
Query: 75 ESVPNLTPDKIEEYENIGFKEICNGKVGVLLLAGGQATRLGFGHPKGMYDVGLPSRKTLF 134
E +T +E ++ F I N K+ V+ L GG T +G K + +V + +
Sbjct: 54 EEKHQVTLKDLEPFDKSRFN-ILN-KLAVIKLNGGLGTTMGCSKAKSLVEV-----REGY 106
Query: 135 QIQAERILRVQQMAAEKYGNEGKITWYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQ 194
+L Q+M E + + + Y+M S +T T Y Y ++V F Q
Sbjct: 107 TFMDLAVLEHQKMC-EAHNVDTPL--YLMNSFYTDEDTKKYLAEKGY-----SNVKTFVQ 158
Query: 195 GTLPCFDFEGKIFLDEKYHL----SAAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSV 250
P D E K+ ++++ + P G+G ++++L+ G+LD + G + + ++
Sbjct: 159 SKCPRLDAETKLPIEDENEDWGDDAWCPPGHGNIFQSLQNSGVLDQLLADGREIIFVSNI 218
Query: 251 DNILIKVADPVFIGYCKSKNADCAAKVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDE 308
DN D + KN D + K+ G + + G +E ++ E
Sbjct: 219 DNTGAN-TDLQIVQLMLDKNVDYIMECTPKTQVDVKGGTLIDIGGRMMHLEMPQVPAE 275
>Z81568-12|CAH10810.1| 493|Caenorhabditis elegans Hypothetical
protein K08E3.5f protein.
Length = 493
Score = 37.5 bits (83), Expect = 0.021
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 24/260 (9%)
Query: 100 KVGVLLLAGGQATRLGFGHPKGMYDVGLPSRKTLFQIQAERILRVQQMAAEKYGNEGKIT 159
K+ V+ L GG T +G PK + + + + T + ++I Q + YG + +
Sbjct: 93 KLVVVKLNGGLGTSMGCKGPKSV--ISVRNDLTFLDLTMQQI----QTLNKTYGVD--VP 144
Query: 160 WYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFDFEGKI----FLDEKYHLS 215
+M S +T T K ++ ++ V F Q P + E + L+ +
Sbjct: 145 LVLMNSFNTNEDTQKVLKKYANVKVS---VHTFSQSQYPRINRETLLPIVKSLEADDNEC 201
Query: 216 AAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAA 275
P G+G Y A G+LD G ++ ++DN+ V D + + + + D A
Sbjct: 202 WYPPGHGNFYEAFHNSGLLDKFLADGKEYCFLSNIDNMGATV-DLSILNFVLNPSPDQTA 260
Query: 276 -----KVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDEASERRNPDGRLTFSAGNICNHY 330
+V K+ G + + G ++E +++ + + + F N N +
Sbjct: 261 PEFLMEVTDKTRADVKGGTLIQYEGRLMLLEIAQVPKDYVDEFKSISK--FRIFNTNNLW 318
Query: 331 FSADFLRKISNFETKLKLHI 350
D +RKI E KL++ +
Sbjct: 319 AKLDAMRKIV-VENKLEMEV 337
>Z81568-8|CAD89739.1| 496|Caenorhabditis elegans Hypothetical
protein K08E3.5e protein.
Length = 496
Score = 37.5 bits (83), Expect = 0.021
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 24/260 (9%)
Query: 100 KVGVLLLAGGQATRLGFGHPKGMYDVGLPSRKTLFQIQAERILRVQQMAAEKYGNEGKIT 159
K+ V+ L GG T +G PK + + + + T + ++I Q + YG + +
Sbjct: 96 KLVVVKLNGGLGTSMGCKGPKSV--ISVRNDLTFLDLTMQQI----QTLNKTYGVD--VP 147
Query: 160 WYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFDFEGKI----FLDEKYHLS 215
+M S +T T K ++ ++ V F Q P + E + L+ +
Sbjct: 148 LVLMNSFNTNEDTQKVLKKYANVKVS---VHTFSQSQYPRINRETLLPIVKSLEADDNEC 204
Query: 216 AAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAA 275
P G+G Y A G+LD G ++ ++DN+ V D + + + + D A
Sbjct: 205 WYPPGHGNFYEAFHNSGLLDKFLADGKEYCFLSNIDNMGATV-DLSILNFVLNPSPDQTA 263
Query: 276 -----KVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDEASERRNPDGRLTFSAGNICNHY 330
+V K+ G + + G ++E +++ + + + F N N +
Sbjct: 264 PEFLMEVTDKTRADVKGGTLIQYEGRLMLLEIAQVPKDYVDEFKSISK--FRIFNTNNLW 321
Query: 331 FSADFLRKISNFETKLKLHI 350
D +RKI E KL++ +
Sbjct: 322 AKLDAMRKIV-VENKLEMEV 340
>Z81568-6|CAB04598.1| 511|Caenorhabditis elegans Hypothetical
protein K08E3.5c protein.
Length = 511
Score = 37.5 bits (83), Expect = 0.021
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 24/260 (9%)
Query: 100 KVGVLLLAGGQATRLGFGHPKGMYDVGLPSRKTLFQIQAERILRVQQMAAEKYGNEGKIT 159
K+ V+ L GG T +G PK + + + + T + ++I Q + YG + +
Sbjct: 111 KLVVVKLNGGLGTSMGCKGPKSV--ISVRNDLTFLDLTMQQI----QTLNKTYGVD--VP 162
Query: 160 WYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFDFEGKI----FLDEKYHLS 215
+M S +T T K ++ ++ V F Q P + E + L+ +
Sbjct: 163 LVLMNSFNTNEDTQKVLKKYANVKVS---VHTFSQSQYPRINRETLLPIVKSLEADDNEC 219
Query: 216 AAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAA 275
P G+G Y A G+LD G ++ ++DN+ V D + + + + D A
Sbjct: 220 WYPPGHGNFYEAFHNSGLLDKFLADGKEYCFLSNIDNMGATV-DLSILNFVLNPSPDQTA 278
Query: 276 -----KVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDEASERRNPDGRLTFSAGNICNHY 330
+V K+ G + + G ++E +++ + + + F N N +
Sbjct: 279 PEFLMEVTDKTRADVKGGTLIQYEGRLMLLEIAQVPKDYVDEFKSISK--FRIFNTNNLW 336
Query: 331 FSADFLRKISNFETKLKLHI 350
D +RKI E KL++ +
Sbjct: 337 AKLDAMRKIV-VENKLEMEV 355
>Z81568-5|CAB04597.1| 522|Caenorhabditis elegans Hypothetical
protein K08E3.5b protein.
Length = 522
Score = 37.5 bits (83), Expect = 0.021
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 24/260 (9%)
Query: 100 KVGVLLLAGGQATRLGFGHPKGMYDVGLPSRKTLFQIQAERILRVQQMAAEKYGNEGKIT 159
K+ V+ L GG T +G PK + + + + T + ++I Q + YG + +
Sbjct: 122 KLVVVKLNGGLGTSMGCKGPKSV--ISVRNDLTFLDLTMQQI----QTLNKTYGVD--VP 173
Query: 160 WYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFDFEGKI----FLDEKYHLS 215
+M S +T T K ++ ++ V F Q P + E + L+ +
Sbjct: 174 LVLMNSFNTNEDTQKVLKKYANVKVS---VHTFSQSQYPRINRETLLPIVKSLEADDNEC 230
Query: 216 AAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAA 275
P G+G Y A G+LD G ++ ++DN+ V D + + + + D A
Sbjct: 231 WYPPGHGNFYEAFHNSGLLDKFLADGKEYCFLSNIDNMGATV-DLSILNFVLNPSPDQTA 289
Query: 276 -----KVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDEASERRNPDGRLTFSAGNICNHY 330
+V K+ G + + G ++E +++ + + + F N N +
Sbjct: 290 PEFLMEVTDKTRADVKGGTLIQYEGRLMLLEIAQVPKDYVDEFKSISK--FRIFNTNNLW 347
Query: 331 FSADFLRKISNFETKLKLHI 350
D +RKI E KL++ +
Sbjct: 348 AKLDAMRKIV-VENKLEMEV 366
>Z81568-4|CAB04596.1| 509|Caenorhabditis elegans Hypothetical
protein K08E3.5a protein.
Length = 509
Score = 37.5 bits (83), Expect = 0.021
Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 24/260 (9%)
Query: 100 KVGVLLLAGGQATRLGFGHPKGMYDVGLPSRKTLFQIQAERILRVQQMAAEKYGNEGKIT 159
K+ V+ L GG T +G PK + + + + T + ++I Q + YG + +
Sbjct: 109 KLVVVKLNGGLGTSMGCKGPKSV--ISVRNDLTFLDLTMQQI----QTLNKTYGVD--VP 160
Query: 160 WYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFDFEGKI----FLDEKYHLS 215
+M S +T T K ++ ++ V F Q P + E + L+ +
Sbjct: 161 LVLMNSFNTNEDTQKVLKKYANVKVS---VHTFSQSQYPRINRETLLPIVKSLEADDNEC 217
Query: 216 AAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAA 275
P G+G Y A G+LD G ++ ++DN+ V D + + + + D A
Sbjct: 218 WYPPGHGNFYEAFHNSGLLDKFLADGKEYCFLSNIDNMGATV-DLSILNFVLNPSPDQTA 276
Query: 276 -----KVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDEASERRNPDGRLTFSAGNICNHY 330
+V K+ G + + G ++E +++ + + + F N N +
Sbjct: 277 PEFLMEVTDKTRADVKGGTLIQYEGRLMLLEIAQVPKDYVDEFKSISK--FRIFNTNNLW 334
Query: 331 FSADFLRKISNFETKLKLHI 350
D +RKI E KL++ +
Sbjct: 335 AKLDAMRKIV-VENKLEMEV 353
>Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical
protein K08E3.5d protein.
Length = 497
Score = 33.9 bits (74), Expect = 0.26
Identities = 30/138 (21%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 218 PDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAA-- 275
P G+G Y A G+LD G ++ ++DN+ V D + + + + D A
Sbjct: 208 PPGHGNFYEAFHNSGLLDKFLADGKEYCFLSNIDNMGATV-DLSILNFVLNPSPDQTAPE 266
Query: 276 ---KVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDEASERRNPDGRLTFSAGNICNHYFS 332
+V K+ G + + G ++E +++ + + + F N N +
Sbjct: 267 FLMEVTDKTRADVKGGTLIQYEGRLMLLEIAQVPKDYVDEFKSISK--FRIFNTNNLWAK 324
Query: 333 ADFLRKISNFETKLKLHI 350
D +RKI E KL++ +
Sbjct: 325 LDAMRKIV-VENKLEMEV 341
>AC006723-5|AAK68424.1| 575|Caenorhabditis elegans Hypothetical
protein Y19D10B.5 protein.
Length = 575
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 155 EGKIT-WYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCF 200
+G+ T W+ SE + +A +K LNEN +++F++ T F
Sbjct: 502 KGRSTIWFNKNSEALSSDSAYCYKLQKSLNLNENQLIYFDEKTCGLF 548
>AF039035-2|AAB94162.1| 304|Caenorhabditis elegans Hypothetical
protein C53A3.1 protein.
Length = 304
Score = 29.5 bits (63), Expect = 5.6
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 292 RVNGHYKVVEYSELTDEASERRNPDGRLTFSAG----NICNHYFSADFLRKISNFETKLK 347
R++ H ++E S+ A E N + A +IC+H F D LR++ NF T
Sbjct: 95 RLSRHVMIIETSDEVINAYEAMNNYLAKYYPAHKWSHSICHHSFWIDELRRLVNFRTDPH 154
Query: 348 LHIAKKKIPY 357
+ IPY
Sbjct: 155 TYYNFNFIPY 164
>Z73906-3|CAE45047.1| 470|Caenorhabditis elegans Hypothetical
protein D2030.2b protein.
Length = 470
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
Query: 203 EGKIFLDEKYHLSAAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKV 257
+G +FLDE ++AA +G+ YR D+S G+QH V+ ++ V
Sbjct: 207 QGIVFLDEVDKIAAAHEGHSAAYR---------DVSGEGVQHALLKLVEGTVVNV 252
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
Query: 203 EGKIFLDEKYHLSAAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKV 257
+G +FLDE ++AA +G+ YR D+S G+QH V+ ++ V
Sbjct: 323 QGIVFLDEVDKIAAAHEGHSAAYR---------DVSGEGVQHALLKLVEGTVVNV 368
>AL132949-36|CAI70419.1| 466|Caenorhabditis elegans Hypothetical
protein Y53F4B.27b protein.
Length = 466
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 227 ALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAAKVVQKSSPSEP 286
A K Q + +++ + + + +VD + KV D V + A +AK+V +SP P
Sbjct: 114 AQKNQKMKEELKKQEDKQAYLKNVDQQIAKVVDEVNAKQVVASKASSSAKMVVPASPKPP 173
Query: 287 VGV 289
V
Sbjct: 174 APV 176
>AL132949-35|CAB61101.3| 574|Caenorhabditis elegans Hypothetical
protein Y53F4B.27a protein.
Length = 574
Score = 29.1 bits (62), Expect = 7.4
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 227 ALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAAKVVQKSSPSEP 286
A K Q + +++ + + + +VD + KV D V + A +AK+V +SP P
Sbjct: 222 AQKNQKMKEELKKQEDKQAYLKNVDQQIAKVVDEVNAKQVVASKASSSAKMVVPASPKPP 281
Query: 287 VGV 289
V
Sbjct: 282 APV 284
>AF022976-16|AAC69076.2| 276|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 132 protein.
Length = 276
Score = 29.1 bits (62), Expect = 7.4
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 400 FSALKNADTAKKDCPSTAREDLLQLHKKY 428
FS L+N T KD P +++ED+L++ + Y
Sbjct: 161 FSFLENTSTNMKDFPHSSKEDVLKIWEFY 189
>U80836-5|AAB37892.2| 621|Caenorhabditis elegans Hypothetical
protein B0432.7 protein.
Length = 621
Score = 28.7 bits (61), Expect = 9.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 5 LLRNLKDHGQEHLIKYWSVLSEEQ 28
LL LKDH + H +YW +L +E+
Sbjct: 540 LLAVLKDHSKVHKDQYWQLLKDER 563
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 28.7 bits (61), Expect = 9.7
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 427 KYIRQAG----GEVADDADIEISPLLSYGGENLDSIVNGKVFTAGPFHLKSPQELSSNGV 482
++ RQAG E DDA +E++P GG + G T GP P + G
Sbjct: 75 RFARQAGYGGDAEYEDDAAVEVAPSRVSGGSCQGCCLPGPPGTPGP--AGRPGKPGRPGA 132
Query: 483 NGNH 486
GNH
Sbjct: 133 CGNH 136
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.136 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,394,691
Number of Sequences: 27539
Number of extensions: 544434
Number of successful extensions: 1196
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1172
Number of HSP's gapped (non-prelim): 19
length of query: 486
length of database: 12,573,161
effective HSP length: 84
effective length of query: 402
effective length of database: 10,259,885
effective search space: 4124473770
effective search space used: 4124473770
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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