GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001609-TA|BGIBMGA001609-PA|IPR002618|UTP--glucose-1-
phosphate uridylyltransferase
         (486 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   5.7  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    23   7.6  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    23   7.6  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    23   7.6  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    23   7.6  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    23   7.6  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    23   7.6  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   7.6  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    23   7.6  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    23   7.6  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    23   7.6  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   7.6  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   10.0 
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   10.0 

>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +  NI      +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNTSNISKTVILSDKL 106


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFL 336
           ++ E  +L  E S+ R+PD R   +A N       +D L
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKL 106


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGN 325
           ++ E  +L  E S+ R+PD R   +A N
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASN 95


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 10.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGN 325
           ++ E  +L  E S+ R+PD R   +A N
Sbjct: 68  RIREIEKLGSERSKSRSPDSRDRSNASN 95


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.136    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,975
Number of Sequences: 429
Number of extensions: 5991
Number of successful extensions: 31
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 14
length of query: 486
length of database: 140,377
effective HSP length: 60
effective length of query: 426
effective length of database: 114,637
effective search space: 48835362
effective search space used: 48835362
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)