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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001609-TA|BGIBMGA001609-PA|IPR002618|UTP--glucose-1-
phosphate uridylyltransferase
         (486 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g35020.1 68415.m04296 UTP--glucose-1-phosphate uridylyltransf...   368   e-102
At1g31070.2 68414.m03804 UDP-N-acetylglucosamine pyrophosphoryla...   351   6e-97
At5g52560.1 68418.m06527 UDP-N-acetylglucosamine pyrophosphoryla...    81   2e-15
At1g31070.1 68414.m03803 UDP-N-acetylglucosamine pyrophosphoryla...    67   2e-11
At5g46420.1 68418.m05713 16S rRNA processing protein RimM family...    54   2e-07
At3g03250.1 68416.m00321 UTP--glucose-1-phosphate uridylyltransf...    39   0.009
At5g17310.2 68418.m02028 UTP--glucose-1-phosphate uridylyltransf...    33   0.32 
At5g17310.1 68418.m02027 UTP--glucose-1-phosphate uridylyltransf...    33   0.56 
At4g31570.1 68417.m04483 expressed protein                             29   5.2  
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide...    29   5.2  
At5g14250.1 68418.m01665 COP9 signalosome complex subunit 3 / CS...    29   6.9  
At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein lo...    29   6.9  
At5g59420.1 68418.m07446 oxysterol-binding family protein simila...    29   9.1  

>At2g35020.1 68415.m04296 UTP--glucose-1-phosphate
           uridylyltransferase family protein similar to SP|Q16222
           UDP-N-acetylhexosamine pyrophosphorylase (Antigen X)
           {Homo sapiens}; contains Pfam profile PF01704:
           UTP--glucose-1-phosphate uridylyltransferase
          Length = 502

 Score =  368 bits (905), Expect = e-102
 Identities = 202/479 (42%), Positives = 284/479 (59%), Gaps = 26/479 (5%)

Query: 2   YETLLRNLKDHGQEHLIKYWSVLSEEQRKQLSDEILKLDLTEVHATFSRAIESTXXXXXX 61
           ++ L+  LKD+GQE +   W  LS E+R  L  +I  LDL  +     R I  +      
Sbjct: 30  HQALVERLKDYGQEDVFSLWDELSPEERDLLLRDIENLDLPRI----DRIIRCSLHSQGL 85

Query: 62  XXXXXXXXXXSHYESVPNLTPDKIEEYENIGFKEICNGKVGVLLLAGGQATRLGFGHPKG 121
                     +   +V   T +  E++  +G K I  GK+GV+LL+GGQ TRLG   PKG
Sbjct: 86  PVAAIEPVPENCVSTVEERTKEDREKWWKMGLKAIYEGKLGVVLLSGGQGTRLGSSDPKG 145

Query: 122 MYDVGLPSRKTLFQIQAERILRVQQMAAEKYGNEGK-----ITWYIMTSEHTKAPTANYF 176
            Y++GLPS K+LFQIQAERIL VQ++A++            I WYIMTS  T  PT  +F
Sbjct: 146 CYNIGLPSGKSLFQIQAERILCVQRLASQAMSEASPTRPVTIQWYIMTSPFTHEPTQKFF 205

Query: 177 KSHSYFGLNENDVVFFEQGTLPCFDFEGKIFLDEKYHLSAAPDGNGGLYRALKTQGILDD 236
           KSH YFGL  + V FF+QGTLPC   +GK  ++  + LS APDGNGG+Y ALK+  +L+D
Sbjct: 206 KSHKYFGLEPDQVTFFQQGTLPCISKDGKFIMETPFSLSKAPDGNGGVYTALKSSRLLED 265

Query: 237 ISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAAKVVQKSSPSEPVGVVCR--VN 294
           ++ RGI+++  + VDN+L++VADP F+GY   K+A  AAKVV+K+ P E VGV  R    
Sbjct: 266 MASRGIKYVDCYGVDNVLVRVADPTFLGYFIDKSAASAAKVVRKAYPQEKVGVFVRRGKG 325

Query: 295 GHYKVVEYSELTDE-ASERRNPDGRLTFSAGNICNHYFSADFLRKISN-FETKLKLHIAK 352
           G   VVEY+EL    AS      GRL +   N+C H F+ DFL +++N  E     H+A+
Sbjct: 326 GPLTVVEYTELDQSMASATNQQTGRLQYCWSNVCLHMFTLDFLNQVANGLEKDSVYHLAE 385

Query: 353 KKIPYIDENGVRQKPNEPNGIKMEKFIFDVFEFAENFICLEVARDTEFSALKNADTAKKD 412
           KKIP I+ + V        G+K+E+FIFD F +A +    EV R+ EF+ +KNA+ +  D
Sbjct: 386 KKIPSINGDIV--------GLKLEQFIFDCFPYAPSTALFEVLREEEFAPVKNANGSNYD 437

Query: 413 CPSTAREDLLQLHKKYIRQAGGEVADD-----ADIEISPLLSYGGENLDSIVNGKVFTA 466
            P +AR  +L+LH +++  AGG +          +E+SPL SY GENL++I  G+ F A
Sbjct: 438 TPESARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHA 496


>At1g31070.2 68414.m03804 UDP-N-acetylglucosamine
           pyrophosphorylase-related low similarity to SP|P43123
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           {Saccharomyces cerevisiae}
          Length = 505

 Score =  351 bits (863), Expect = 6e-97
 Identities = 198/478 (41%), Positives = 279/478 (58%), Gaps = 27/478 (5%)

Query: 3   ETLLRNLKDHGQEHLIKYWSVLSEEQRKQLSDEILKLDLTEVHATFSRAIESTXXXXXXX 62
           + L+  LKD+GQE +   W  LS +++  L  +I  LDL  +     R I  +       
Sbjct: 35  QALVERLKDYGQEDIFSLWDELSPDEKDFLVRDIENLDLPRI----DRIIRCSLHSQGLP 90

Query: 63  XXXXXXXXXSHYESVPNLTPDKIEEYENIGFKEICNGKVGVLLLAGGQATRLGFGHPKGM 122
                    +   +V   T +  E++  +G K I  GK+GV+LL+GGQ TRLG   PKG 
Sbjct: 91  VAAIEPVPENWVSTVDGRTMEDREKWWKMGLKTIYEGKLGVVLLSGGQGTRLGSSDPKGC 150

Query: 123 YDVGLPSRKTLFQIQAERILRVQQMAAEKYGNEGKIT-----WYIMTSEHTKAPTANYFK 177
           +++GLPS K+LFQIQAERIL VQ++AA+   +EG I      WYIMTS  T   T  YF 
Sbjct: 151 FNIGLPSGKSLFQIQAERILCVQRLAAQVV-SEGPIRPVTIHWYIMTSPFTDEATRKYFS 209

Query: 178 SHSYFGLNENDVVFFEQGTLPCFDFEGKIFLDEKYHLSAAPDGNGGLYRALKTQGILDDI 237
           SH YFGL  + + FF+QGTLPC   +GK  ++  + L+ APDGNGG+Y ALK   +L+D+
Sbjct: 210 SHKYFGLEPDQISFFQQGTLPCVTKDGKFIMETPFSLAKAPDGNGGVYAALKCSRLLEDM 269

Query: 238 SVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAAKVVQKSSPSEPVGVVCR--VNG 295
           + RGI+++  + VDN+L++VADP F+GY   K A  AAKVV+K+ P E VGV  R    G
Sbjct: 270 ASRGIKYVDCYGVDNVLVRVADPTFLGYFIDKGAASAAKVVRKAYPQEQVGVFVRRGKGG 329

Query: 296 HYKVVEYSELTDE-ASERRNPDGRLTFSAGNICNHYFSADFLRKI-SNFETKLKLHIAKK 353
              VVEYSEL    AS      GRL +   N+C H F+ DFL ++ +  E     H+A+K
Sbjct: 330 PLTVVEYSELDQSMASAINQRTGRLQYCWSNVCLHMFTLDFLNQVATGLEKDSVYHLAEK 389

Query: 354 KIPYIDENGVRQKPNEPNGIKMEKFIFDVFEFAENFICLEVARDTEFSALKNADTAKKDC 413
           KIP +  NG         G+K+E+FIFD F +A +    EV R+ EF+ +KN + +  D 
Sbjct: 390 KIPSM--NGYTM------GLKLEQFIFDSFPYAPSTALFEVLREEEFAPVKNVNGSNFDT 441

Query: 414 PSTAREDLLQLHKKYIRQAGGEVADD-----ADIEISPLLSYGGENLDSIVNGKVFTA 466
           P +AR  +L+LH +++  AGG +          +E+SPL SY GENL++I  G+ F A
Sbjct: 442 PESARLLVLRLHTRWVIAAGGFLTHSVPLYATGVEVSPLCSYAGENLEAICRGRTFHA 499


>At5g52560.1 68418.m06527 UDP-N-acetylglucosamine
           pyrophosphorylase-related contains weak similarity to
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (Swiss-Prot:O74933) [Candida albicans]
          Length = 614

 Score = 81.0 bits (191), Expect = 2e-15
 Identities = 86/336 (25%), Positives = 142/336 (42%), Gaps = 20/336 (5%)

Query: 5   LLRNLKDHGQEHLIKYWSVLSEEQRKQLS--DEILKLDLTEVHATFSRAIESTXXXXXXX 62
           L + L ++GQ HL + W  L  + +++L+  D+I +L+ +  +     A   T       
Sbjct: 30  LAKILLENGQSHLFQQWPELGVDDKEKLAFFDQIARLNSS--YPGGLAAYIKTAKELLAD 87

Query: 63  XXXXXXXXXSHYESVP---NLT--PDKIEEYENIGFKEICNGKVGVLLLAGGQATRLGFG 117
                        SVP   NLT   D   E E  G  E  N     +L+AGG   RLG+ 
Sbjct: 88  SKVGKNPYDGFSPSVPSGENLTFGTDNFIEMEKRGVVEARNA--AFVLVAGGLGERLGYN 145

Query: 118 HPKGMYDVGLPSRKTLFQIQAERILRVQQMA--AEKYGNEGKITWYIMTSEHTKAPTANY 175
             K        +     Q   E IL +Q+ +   +  G+E  I + IMTS+ T + T + 
Sbjct: 146 GIKVALPRETTTGTCFLQHYIESILALQEASNKIDSDGSERDIPFIIMTSDDTHSRTLDL 205

Query: 176 FKSHSYFGLNENDVVFFEQGTLPCF-DFEGKIFLD--EKYHLSAAPDGNGGLYRALKTQG 232
            + +SYFG+    V   +Q  + C  D + ++ LD   KY +   P G+G ++  L + G
Sbjct: 206 LELNSYFGMKPTQVHLLKQEKVACLDDNDARLALDPHNKYSIQTKPHGHGDVHSLLYSSG 265

Query: 233 ILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAAKVVQKSSPSEPVGV--V 290
           +L      G++ +      N L+  A P  +G   +K     +  V + +     G+  +
Sbjct: 266 LLHKWLEAGLKWVLFFQDTNGLLFNAIPASLGVSATKQYHVNSLAVPRKAKEAIGGISKL 325

Query: 291 CRVNGHYKV--VEYSELTDEASERRNPDGRLTFSAG 324
             V+G   V  VEY++L         PDG +    G
Sbjct: 326 THVDGRSMVINVEYNQLDPLLRASGFPDGDVNCETG 361


>At1g31070.1 68414.m03803 UDP-N-acetylglucosamine
           pyrophosphorylase-related low similarity to SP|P43123
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           {Saccharomyces cerevisiae}
          Length = 153

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 4/121 (3%)

Query: 3   ETLLRNLKDHGQEHLIKYWSVLSEEQRKQLSDEILKLDLTEVHATFSRAIESTXXXXXXX 62
           + L+  LKD+GQE +   W  LS +++  L  +I  LDL  +     R I  +       
Sbjct: 35  QALVERLKDYGQEDIFSLWDELSPDEKDFLVRDIENLDLPRI----DRIIRCSLHSQGLP 90

Query: 63  XXXXXXXXXSHYESVPNLTPDKIEEYENIGFKEICNGKVGVLLLAGGQATRLGFGHPKGM 122
                    +   +V   T +  E++  +G K I  GK+GV+LL+GGQ TRLG   PKG 
Sbjct: 91  VAAIEPVPENWVSTVDGRTMEDREKWWKMGLKTIYEGKLGVVLLSGGQGTRLGSSDPKGC 150

Query: 123 Y 123
           +
Sbjct: 151 F 151


>At5g46420.1 68418.m05713 16S rRNA processing protein RimM family
           contains weak similarity to Swiss-Prot:O74933
           UDP-N-acetylglucosamine pyrophosphorylase [Candida
           albicans]; contains Pfam profiles PF01782: 16S rRNA
           processing protein RimM, PF05239: PRC-barrel domain
          Length = 653

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 162 IMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLP--CFDFEG----KIFLDEKYHLS 215
           I++ EHT       F+ + +FG     +   ++ TLP  C   E     KI +   + + 
Sbjct: 448 IVSPEHTIEALQKLFQDNDHFGFESEKIWILKEETLPVVCSSPEEPKKHKILMKSPWEIL 507

Query: 216 AAPDGNGGLYRALKTQGILDDISVRGIQHLHAHSVD---NILIKVADPVFIGYCKSKNAD 272
            +P G+GG+   L + G  D +S  GI +L  HS++          +P+ +G+  ++ A+
Sbjct: 508 ESPVGSGGVLSILASHGTTDSLSTLGINYLQVHSIETKPQPSQHYINPMLVGFVSARGAE 567

Query: 273 CAAKVVQKS 281
              +V ++S
Sbjct: 568 IGIQVTEES 576


>At3g03250.1 68416.m00321 UTP--glucose-1-phosphate
           uridylyltransferase, putative / UDP-glucose
           pyrophosphorylase, putative / UGPase, putative strong
           similarity to SP|P19595 UTP--glucose-1-phosphate
           uridylyltransferase (EC 2.7.7.9) (UDP-glucose
           pyrophosphorylase) (UDPGP) (UGPase) {Solanum tuberosum};
           contains Pfam profile PF01704: UTP--glucose-1-phosphate
           uridylyltransferase
          Length = 469

 Score = 38.7 bits (86), Expect = 0.009
 Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 22/234 (9%)

Query: 100 KVGVLLLAGGQATRLGFGHPKGMYDV--GLPSRKTLFQIQAERILRVQQMAAEKYGNEGK 157
           K+ VL L GG  T +G   PK + +V  GL +   L  IQ E +         KYG   K
Sbjct: 79  KLVVLKLNGGLGTTMGCTGPKSVIEVRDGL-TFLDLIVIQIENL-------NNKYGC--K 128

Query: 158 ITWYIMTSEHTKAPTANYFKSHSYFGLNEN-DVVFFEQGTLPCFDFEGKIFLDEKYHLSA 216
           +   +M S +T   T    + ++    N N D+  F Q   P    +  +    K     
Sbjct: 129 VPLVLMNSFNTHDDTHKIVEKYT----NSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDK 184

Query: 217 A---PDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADC 273
               P G+G ++ AL   G LD    +G +++   + DN+   V   +     ++KN  C
Sbjct: 185 EGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTILKHLIQNKNEYC 244

Query: 274 AAKVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDE-ASERRNPDGRLTFSAGNI 326
             +V  K+      G +    G  +++E +++ DE  +E ++ +    F+  N+
Sbjct: 245 -MEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNL 297


>At5g17310.2 68418.m02028 UTP--glucose-1-phosphate
           uridylyltransferase, putative / UDP-glucose
           pyrophosphorylase, putative / UGPase, putative strong
           similarity to SP|P19595 UTP--glucose-1-phosphate
           uridylyltransferase (EC 2.7.7.9) (UDP-glucose
           pyrophosphorylase) (UDPGP) (UGPase) {Solanum tuberosum};
           contains Pfam profile PF01704: UTP--glucose-1-phosphate
           uridylyltransferase
          Length = 470

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 20/233 (8%)

Query: 100 KVGVLLLAGGQATRLGFGHPKGMYDV--GLPSRKTLFQIQAERILRVQQMAAEKYGNEGK 157
           K+ VL L GG  T +G   PK + +V  GL +   L  IQ E +         KY    K
Sbjct: 80  KLVVLKLNGGLGTTMGCTGPKSVIEVRDGL-TFLDLIVIQIENL-------NNKYNC--K 129

Query: 158 ITWYIMTSEHTKAPTANYFKSHSYFGLNENDVVFFEQGTLPCFDFEGKIFLDEKYHLSAA 217
           +   +M S +T   T    + ++   +   D+  F Q   P    +  +    K      
Sbjct: 130 VPLVLMNSFNTHDDTQKIVEKYTKSNV---DIHTFNQSKYPRVVADEFVPWPSKGKTDKD 186

Query: 218 ---PDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCA 274
              P G+G ++ +L   G LD    +G +++   + DN+   V   +     ++KN  C 
Sbjct: 187 GWYPPGHGDVFPSLMNSGKLDAFLSQGKEYVFIANSDNLGAIVDLKILKHLIQNKNEYC- 245

Query: 275 AKVVQKSSPSEPVGVVCRVNGHYKVVEYSELTDE-ASERRNPDGRLTFSAGNI 326
            +V  K+      G +    G  +++E +++ DE  +E ++ +    F+  N+
Sbjct: 246 MEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNL 298


>At5g17310.1 68418.m02027 UTP--glucose-1-phosphate
           uridylyltransferase, putative / UDP-glucose
           pyrophosphorylase, putative / UGPase, putative strong
           similarity to SP|P19595 UTP--glucose-1-phosphate
           uridylyltransferase (EC 2.7.7.9) (UDP-glucose
           pyrophosphorylase) (UDPGP) (UGPase) {Solanum tuberosum};
           contains Pfam profile PF01704: UTP--glucose-1-phosphate
           uridylyltransferase
          Length = 390

 Score = 32.7 bits (71), Expect = 0.56
 Identities = 24/110 (21%), Positives = 52/110 (47%), Gaps = 2/110 (1%)

Query: 218 PDGNGGLYRALKTQGILDDISVRGIQHLHAHSVDNILIKVADPVFIGYCKSKNADCAAKV 277
           P G+G ++ +L   G LD    +G +++   + DN+   V   +     ++KN  C  +V
Sbjct: 110 PPGHGDVFPSLMNSGKLDAFLSQGKEYVFIANSDNLGAIVDLKILKHLIQNKNEYC-MEV 168

Query: 278 VQKSSPSEPVGVVCRVNGHYKVVEYSELTDE-ASERRNPDGRLTFSAGNI 326
             K+      G +    G  +++E +++ DE  +E ++ +    F+  N+
Sbjct: 169 TPKTLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNL 218


>At4g31570.1 68417.m04483 expressed protein
          Length = 2712

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/40 (32%), Positives = 23/40 (57%)

Query: 373 IKMEKFIFDVFEFAENFICLEVARDTEFSALKNADTAKKD 412
           + +EK + D+ E  E FI L+V  DT  + + + +  KK+
Sbjct: 530 LSLEKSLLDLSETKEKFINLQVENDTLVAVISSMNDEKKE 569


>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
           identical to SP|P11139 Tubulin alpha-1 chain
           {Arabidopsis thaliana}
          Length = 450

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 415 STAREDLLQLHKKYIRQAGGEVADDADIE 443
           S AREDL  L K Y  + GGE A+D D E
Sbjct: 419 SEAREDLAALEKDY-EEVGGEGAEDDDEE 446


>At5g14250.1 68418.m01665 COP9 signalosome complex subunit 3 / CSN
           complex subunit 3 (CSN3) / FUSCA protein (FUS11) CSN3,
           FUS11; identical to COP9 signalosome subunit 3
           GI:14388969 [Arabidopsis thaliana]; identical to cDNA
           CSN complex subunit 3 (CSN3)  GI:18056656; contains Pfam
           profile PF01399: PCI domain
          Length = 429

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/47 (31%), Positives = 27/47 (57%)

Query: 392 LEVARDTEFSALKNADTAKKDCPSTAREDLLQLHKKYIRQAGGEVAD 438
           L VAR+ EF   KN    K+   S  + ++L+L +KY+  +  ++A+
Sbjct: 278 LVVARNAEFEEDKNLGLVKQAVSSLYKRNILRLTQKYLTLSLQDIAN 324


>At2g37290.1 68415.m04574 RabGAP/TBC domain-containing protein low
           similarity to Rab6 GTPase activating protein, GAPCenA
           [Homo sapiens] GI:12188746; contains Pfam profile
           PF00566: TBC domain
          Length = 882

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 421 LLQLHKKYIRQAGGEVADDADIEISPLLSYGGENLDSIVN 460
           +L   +K  ++  GE  DD D   SP L+  G N+DS V+
Sbjct: 615 ILDHEQKSTQRNDGENQDDDDESCSPFLNLDGANVDSEVD 654


>At5g59420.1 68418.m07446 oxysterol-binding family protein similar
           to SP|P16258 Oxysterol-binding protein 1 {Oryctolagus
           cuniculus}; contains Pfam profile PF01237:
           Oxysterol-binding protein
          Length = 457

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 298 KVVEYSELTDEASERRNPDGRLTFSAGNICNHYFSADFLRKISN-FETKLKLHIAKKKIP 356
           +++EYS L D+A E  +P  RL +++    + Y++     K  N    +    +    I 
Sbjct: 103 EIMEYSHLLDQADECEDPYLRLVYASSWAISVYYAFQRTWKPFNPILGETYEMVNHGGIS 162

Query: 357 YIDENGVRQKPNEPNGIKMEKFIFDV 382
           +I E      P      + E FI+D+
Sbjct: 163 FISEQVSHHPPMSAGHAENEHFIYDI 188


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.317    0.136    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,817,668
Number of Sequences: 28952
Number of extensions: 511756
Number of successful extensions: 1088
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1065
Number of HSP's gapped (non-prelim): 14
length of query: 486
length of database: 12,070,560
effective HSP length: 84
effective length of query: 402
effective length of database: 9,638,592
effective search space: 3874713984
effective search space used: 3874713984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)

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