GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001608-TA|BGIBMGA001608-PA|IPR007754|N-
acetylglucosaminyltransferase II
         (396 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   6.7  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    22   8.8  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)

Query: 71  PY-SIQTHPNEFPGLDPNDCPRDVKMQQAIKL 101
           PY S Q H +      P D P D  +  A KL
Sbjct: 47  PYASSQHHHHHLQARPPQDSPYDASVAAACKL 78


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)

Query: 116 REAKYTQTKHHWWWKA 131
           R A+Y QTKH   W A
Sbjct: 77  RIARYVQTKHPDVWNA 92


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.134    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,851
Number of Sequences: 317
Number of extensions: 4326
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 2
length of query: 396
length of database: 114,650
effective HSP length: 58
effective length of query: 338
effective length of database: 96,264
effective search space: 32537232
effective search space used: 32537232
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)