Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001608-TA|BGIBMGA001608-PA|IPR007754|N-
acetylglucosaminyltransferase II
(396 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81458-3|CAB03823.2| 487|Caenorhabditis elegans Hypothetical pr... 175 6e-44
AF251126-1|AAF71273.1| 487|Caenorhabditis elegans UDP-GlcNAc:a-... 175 6e-44
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 30 3.3
U97593-7|AAB52878.1| 591|Caenorhabditis elegans Prion-like-(q/n... 29 7.6
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 29 7.6
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 29 7.6
U67949-8|AAD32274.1| 626|Caenorhabditis elegans Hypothetical pr... 29 7.6
>Z81458-3|CAB03823.2| 487|Caenorhabditis elegans Hypothetical
protein C03E10.4 protein.
Length = 487
Score = 175 bits (425), Expect = 6e-44
Identities = 81/176 (46%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Query: 16 KVHTRLTYLRHLIVSLAQARDIERTLLVFSHDYYNEEINSLVRSIDFTKVMQIFYPYSIQ 75
+VH R YL++LI S+ + IE TLLVFSHD IN ++R+I F +V QIFYPY++Q
Sbjct: 130 QVHDRPVYLQYLIESMRNTKGIEDTLLVFSHDINVGIINEMIRNITFARVYQIFYPYNLQ 189
Query: 76 THPNEFPGLDPNDCPRDVKMQQAIKLKCINALHPDLHGHYREAKYTQTKHHWWWKANRIF 135
P FPG P+DCP +K +A + C N PD +G+YR A+ TQ KHHWWWK N +F
Sbjct: 190 LFPTVFPGQSPSDCPEKMKRDKAQETNCSNWSSPDKYGNYRVAQLTQIKHHWWWKMNFVF 249
Query: 136 NQL-ECTTNHTGMVVFLEEDHYVAEDFIYMLNLLRATADRSCPQCEIISLGTYLKT 190
+ + E + V+ LEEDH +A D +++L+++ + + C CEIISLG YLK+
Sbjct: 250 DGIVEKYSMKDPWVLLLEEDHMLAPDALHVLDIIVSNRPKYCENCEIISLGFYLKS 305
Score = 136 bits (329), Expect = 3e-32
Identities = 63/147 (42%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 234 NLYG-NTQKVDITPWHSSMHNMGFGFNRSVWHNIMEIQEQFCAYDDYNWDYSLLHLSQNR 292
N YG + + + PW+SS HNMG ++ W I E FC +DDYNWD+SL+ +S
Sbjct: 307 NKYGQDIAHLGVHPWYSSKHNMGMALQKNTWQKIKGCSEMFCKWDDYNWDWSLMQISAKC 366
Query: 293 KNQEKFKVIMSKGPRVFHIGECGIHHKKSNCNASSVISKVQKLLQNAKPYLFPGSVTATV 352
Q +F+VI +K PRV HIG+CG+H + C A + Q+L + K LFP S++ T
Sbjct: 367 LPQ-RFRVIFTKSPRVIHIGDCGVHTHR--CEAHKALQSTQELFRQHKDLLFPTSLSVTD 423
Query: 353 TAGGAKHNKKLTKGNGGWGDIRDQELC 379
T ++ + K +K NGGWGDIRD++LC
Sbjct: 424 T---SRRSLKPSKENGGWGDIRDRQLC 447
>AF251126-1|AAF71273.1| 487|Caenorhabditis elegans
UDP-GlcNAc:a-6-D-mannoside
b1,2-N-acetylglucosaminyltransferase II protein.
Length = 487
Score = 175 bits (425), Expect = 6e-44
Identities = 81/176 (46%), Positives = 114/176 (64%), Gaps = 1/176 (0%)
Query: 16 KVHTRLTYLRHLIVSLAQARDIERTLLVFSHDYYNEEINSLVRSIDFTKVMQIFYPYSIQ 75
+VH R YL++LI S+ + IE TLLVFSHD IN ++R+I F +V QIFYPY++Q
Sbjct: 130 QVHDRPVYLQYLIESMRNTKGIEDTLLVFSHDINVGIINEMIRNITFARVYQIFYPYNLQ 189
Query: 76 THPNEFPGLDPNDCPRDVKMQQAIKLKCINALHPDLHGHYREAKYTQTKHHWWWKANRIF 135
P FPG P+DCP +K +A + C N PD +G+YR A+ TQ KHHWWWK N +F
Sbjct: 190 LFPTVFPGQSPSDCPEKMKRDKAQETNCSNWSSPDKYGNYRVAQLTQIKHHWWWKMNFVF 249
Query: 136 NQL-ECTTNHTGMVVFLEEDHYVAEDFIYMLNLLRATADRSCPQCEIISLGTYLKT 190
+ + E + V+ LEEDH +A D +++L+++ + + C CEIISLG YLK+
Sbjct: 250 DGIVEKYSMKDPWVLLLEEDHMLAPDALHVLDIIVSNRPKYCENCEIISLGFYLKS 305
Score = 130 bits (315), Expect = 1e-30
Identities = 62/147 (42%), Positives = 89/147 (60%), Gaps = 7/147 (4%)
Query: 234 NLYG-NTQKVDITPWHSSMHNMGFGFNRSVWHNIMEIQEQFCAYDDYNWDYSLLHLSQNR 292
N YG + + + PW+SS HNMG ++ I E FC +DDYNWD+SL+ +S
Sbjct: 307 NKYGQDIAHLGVHPWYSSKHNMGMALQKNTSQKIKGCSEMFCKWDDYNWDWSLMQISAKC 366
Query: 293 KNQEKFKVIMSKGPRVFHIGECGIHHKKSNCNASSVISKVQKLLQNAKPYLFPGSVTATV 352
Q +F+VI +K PRV HIG+CG+H + C A + Q+L + K LFP S++ T
Sbjct: 367 LPQ-RFRVIFTKSPRVIHIGDCGVHTHR--CEAHKALQSTQELFRQHKDLLFPTSLSVTD 423
Query: 353 TAGGAKHNKKLTKGNGGWGDIRDQELC 379
T ++ + K +K NGGWGDIRD++LC
Sbjct: 424 T---SRRSLKPSKENGGWGDIRDRQLC 447
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 29.9 bits (64), Expect = 3.3
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 313 ECGIHHKKSNCNASSVISKVQKLLQNAK-PYLFPGSVTATVTAGGAKHNKKLTKGNGGWG 371
EC I+ SNC+ + +S ++ Q+ K +LF T + +H+ LT NG W
Sbjct: 20 ECQINEICSNCSLKAELSTKCEISQDVKEAFLFCNPRTKKI---DIEHSSYLTCTNGTW- 75
Query: 372 DIRDQELCTNMTRI 385
QE+C+ R+
Sbjct: 76 ---KQEICSEDGRV 86
>U97593-7|AAB52878.1| 591|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform b protein.
Length = 591
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 186 TYLKTYQYHANGDKRKKQMTLNYIQQVRMANEERRKRQDTQWNFQVYPNLYGNTQKVDIT 245
+Y +T QY +N T NY Q + +++ + Q N Q N NT +VD
Sbjct: 24 SYNETRQYSSNA-------TSNYPSQTQQYQQQQHQYQSDHSNAQRLLNSGYNTNQVDYV 76
Query: 246 PWHSSMHNMG 255
H +N G
Sbjct: 77 LGHKDKYNEG 86
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 186 TYLKTYQYHANGDKRKKQMTLNYIQQVRMANEERRKRQDTQWNFQVYPNLYGNTQKVDIT 245
+Y +T QY +N T NY Q + +++ + Q N Q N NT +VD
Sbjct: 443 SYNETRQYSSNA-------TSNYPSQTQQYQQQQHQYQSDHSNAQRLLNSGYNTNQVDYV 495
Query: 246 PWHSSMHNMG 255
H +N G
Sbjct: 496 LGHKDKYNEG 505
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 186 TYLKTYQYHANGDKRKKQMTLNYIQQVRMANEERRKRQDTQWNFQVYPNLYGNTQKVDIT 245
+Y +T QY +N T NY Q + +++ + Q N Q N NT +VD
Sbjct: 608 SYNETRQYSSNA-------TSNYPSQTQQYQQQQHQYQSDHSNAQRLLNSGYNTNQVDYV 660
Query: 246 PWHSSMHNMG 255
H +N G
Sbjct: 661 LGHKDKYNEG 670
>U67949-8|AAD32274.1| 626|Caenorhabditis elegans Hypothetical
protein F55A4.8a protein.
Length = 626
Score = 28.7 bits (61), Expect = 7.6
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 276 YDDYNWDYSLLHLSQNRKNQEKFKVIMSKGPRVFHIGECGIHHKKSNCNASSVIS 330
YD +N DY H E FKV K F I E I + K N + +IS
Sbjct: 97 YDGFNEDYQAGHNPPTTTRSEIFKVKFQKSESEFRISE--IVNVKMNMSQPFIIS 149
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.134 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,345,229
Number of Sequences: 27539
Number of extensions: 442396
Number of successful extensions: 1108
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1096
Number of HSP's gapped (non-prelim): 9
length of query: 396
length of database: 12,573,161
effective HSP length: 83
effective length of query: 313
effective length of database: 10,287,424
effective search space: 3219963712
effective search space used: 3219963712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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