Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001607-TA|BGIBMGA001607-PA|undefined
(88 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex s... 27 0.40
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 0.53
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 0.92
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 25 1.6
SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10 |Schizos... 25 1.6
SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo... 24 2.8
SPAC1B3.17 |clr2||chromatin silencing protein Clr2|Schizosacchar... 24 3.7
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 24 3.7
SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomy... 24 3.7
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 24 3.7
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 23 4.9
SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr 2|... 23 4.9
SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces pombe... 23 6.5
SPAC26A3.14c ||SPAC23A6.14c|DUF1748 family protein|Schizosacchar... 23 6.5
SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces po... 23 8.6
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 23 8.6
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 23 8.6
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 23 8.6
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 23 8.6
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 23 8.6
>SPAC17G8.04c |arc15|arc5, arc5|ARP2/3 actin-organizing complex
subunit Arc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 27.1 bits (57), Expect = 0.40
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 33 KNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQND 76
+N + + AVS+ + + R AIQ N Q + Y P ND
Sbjct: 25 RNETAEQVQAAVSQLIPQARSAIQTGNALQGLKTLLSYVPYGND 68
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 0.53
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 32 PKNSSVNSTERAVSKNLTEIRKAIQRS-NEAQYIHNE 67
P N+S N T R S+ + RK+I S N +++ NE
Sbjct: 559 PPNNSKNQTYRRSSRGSNKTRKSISHSKNTDKHVGNE 595
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.8 bits (54), Expect = 0.92
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 4 EELMNSNDTSEQVLALVPPELHKYLTVHPKNS----SVNSTER-AVSKNLTEIRKAIQRS 58
EE +NS ++++ + V L TV KN S ST+ VS L++ +K R
Sbjct: 164 EEKINSLESAQSIEQEVISSLKDDKTVETKNDVPEVSRPSTDTIGVSSALSKKKKKRNRK 223
Query: 59 NEAQYIHNEDIYGPVQNDTI 78
N+ + ++I +ND +
Sbjct: 224 NQKKKSTKQNIEATTENDAL 243
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.0 bits (52), Expect = 1.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 30 VHPKNSSVNSTERAVSKNLTEIR 52
V PK S NSTE VS NL ++
Sbjct: 32 VTPKQKSPNSTEEDVSLNLKTLK 54
>SPBC23E6.04c |utp10||U3 snoRNP-associated protein Utp10
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1649
Score = 25.0 bits (52), Expect = 1.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 38 NSTERAVSKNLTEIRKAIQRSNEAQY 63
N +ER + +L E+RK I+ + + Y
Sbjct: 487 NGSERIIILSLIELRKTIEENKDVDY 512
>SPBC8D2.05c |sfi1||spindle pole body protein
Sfi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 840
Score = 24.2 bits (50), Expect = 2.8
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 47 NLTEIRKAIQRSNEAQYIHNEDIYGPVQND 76
+L E I+ + ++Y+H D P+QND
Sbjct: 775 SLLEAEATIEGNRTSRYMHTFDTTLPMQND 804
>SPAC1B3.17 |clr2||chromatin silencing protein
Clr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 23.8 bits (49), Expect = 3.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 45 SKNLTEIRKAIQRSNEAQYIHNED 68
S N+T +RK +Q+ NE + +D
Sbjct: 199 SGNMTRVRKNLQKENERMFHECKD 222
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 23.8 bits (49), Expect = 3.7
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 17 LALVPPELHKYLTVHPKNSSVNSTERAVSKNL--TEIRKAIQRSNEAQYIHNEDIYGPVQ 74
L L P K+ +SSVNST A S N +R Q+ H+ + + +
Sbjct: 621 LFLQPRNFFKHNPALDTSSSVNSTSEATSPNTHHENLRDTSQKRESHSTPHDYEPHVSDK 680
Query: 75 ND 76
ND
Sbjct: 681 ND 682
>SPAC13G7.03 |||up-frameshift suppressor3 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 278
Score = 23.8 bits (49), Expect = 3.7
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 10 NDTSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDI 69
N+T ++ + P Y + P +S E ++ ++ +QR + +Q N+D+
Sbjct: 88 NNTYRAIVTIAP-----YQKIPPSKVKADSLEGSLEQDPKFQEFKVQRESYSQTASNDDV 142
Query: 70 YGPVQNDTIII 80
+Q T ++
Sbjct: 143 IEKLQTSTPLL 153
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 23.8 bits (49), Expect = 3.7
Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 4 EELMNSNDTSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQY 63
++++ N +EQ+ L L L + K S+N + +KN + RK + +SN
Sbjct: 151 KDVIPINPNAEQLKTLSKRLLD--LALSEKTHSLNKASKKSNKNGDKKRKHVSKSNSKHA 208
Query: 64 IH 65
H
Sbjct: 209 KH 210
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 23.4 bits (48), Expect = 4.9
Identities = 10/36 (27%), Positives = 21/36 (58%)
Query: 35 SSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIY 70
S +N+T+ V + L++++K + Q I E++Y
Sbjct: 269 SKINATDADVKQLLSDVKKNKSKWANDQRIGQEELY 304
>SPBC582.03 |cdc13||cyclin Cdc13|Schizosaccharomyces pombe|chr
2|||Manual
Length = 482
Score = 23.4 bits (48), Expect = 4.9
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 25 HKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQ 62
HK PK + ER VSK++ ++ + S E+Q
Sbjct: 147 HKDQATIPKKLKKDVDERVVSKDIPKLHRDSVESPESQ 184
>SPAC1002.02 |mug31||nucleoporin Pom34 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 229
Score = 23.0 bits (47), Expect = 6.5
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 1 MFAEELMNSNDTSEQVLALVPPELHKYLTVHPKNSSVNSTE 41
++ + N D+S+ A P L K L PK SS++ +
Sbjct: 14 LYEDSAENKVDSSKNTEANFPITLPKVLPTDPKASSLHKPQ 54
>SPAC26A3.14c ||SPAC23A6.14c|DUF1748 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 73
Score = 23.0 bits (47), Expect = 6.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 44 VSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQ 74
VS + IR++ S E + IHNED+ V+
Sbjct: 17 VSTCVAGIRRSSGISFEVEKIHNEDVKTAVE 47
>SPAC3G9.08 |png1||ING family homolog Png1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 22.6 bits (46), Expect = 8.6
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 6/36 (16%)
Query: 25 HKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNE 60
H LT HPK ++ ST R E +KAI NE
Sbjct: 58 HGSLTPHPKEDALYSTIR------EEYQKAINIQNE 87
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 22.6 bits (46), Expect = 8.6
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 31 HPKN--SSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYG 71
HP + VN+T V K+ EI A + + + N +YG
Sbjct: 126 HPDKVRNMVNTTREEVEKHYIEITNAYRALTDDKTRENYALYG 168
>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
Eng2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 706
Score = 22.6 bits (46), Expect = 8.6
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 58 SNEAQYIHNEDIYGPVQNDTIII 80
S + +++ ++G V+NDT++I
Sbjct: 536 SEDFNFLYATKLWGMVRNDTVLI 558
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 22.6 bits (46), Expect = 8.6
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 12 TSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEI 51
T + ALVPP L KY + K + + + E+
Sbjct: 2182 TGSVLFALVPPALEKYNLENQKKEILENESKEEETRQPEV 2221
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 22.6 bits (46), Expect = 8.6
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 58 SNEAQYIHNEDIYGPVQNDT 77
++EA H ED YG +DT
Sbjct: 436 NDEASNNHREDFYGVKNSDT 455
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 22.6 bits (46), Expect = 8.6
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 22 PELHKYLTVHPKNSSVNSTERAVSKNLTEI 51
PEL+ LT KNS+ + ++ + S++ + +
Sbjct: 247 PELNSLLTSQSKNSTPSESDSSSSESSSSV 276
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.126 0.335
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 397,004
Number of Sequences: 5004
Number of extensions: 13256
Number of successful extensions: 47
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 30
Number of HSP's gapped (non-prelim): 20
length of query: 88
length of database: 2,362,478
effective HSP length: 61
effective length of query: 27
effective length of database: 2,057,234
effective search space: 55545318
effective search space used: 55545318
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)
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