Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001607-TA|BGIBMGA001607-PA|undefined
(88 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396 29 0.46
07_03_1137 - 24220597-24220619,24220694-24221414,24221513-242217... 29 0.46
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 0.46
02_04_0240 - 21194597-21194743,21195579-21195680,21195797-211958... 28 0.80
03_05_0243 - 22275425-22276402,22277192-22277307,22277434-22279012 27 1.4
02_05_0938 + 32901143-32901215,32901841-32901982,32902243-329023... 27 1.9
08_02_0864 + 21994286-21994989,21996257-21996958,21997221-219973... 27 2.5
08_02_0592 + 19064025-19066596,19067036-19067084,19068530-190686... 26 4.3
01_06_0840 + 32343700-32344138,32345329-32345419,32345584-323458... 26 4.3
08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135 25 5.7
01_05_0645 - 23899579-23904483 25 5.7
11_01_0485 + 3728686-3728863,3729933-3730095,3730508-3730549,373... 25 7.5
10_03_0019 - 7123502-7123673,7124145-7124226,7124228-7124394,712... 25 7.5
10_01_0099 - 1202668-1203023,1203097-1206037 25 7.5
05_01_0318 - 2488529-2489196,2489773-2490372,2490620-2490773,249... 25 7.5
04_01_0126 - 1340540-1341376,1341437-1341900,1342105-1342156,134... 25 9.9
02_02_0536 + 11304298-11304400,11304731-11305797,11306026-113064... 25 9.9
>10_05_0012 + 7874326-7874831,7929715-7931393,7931508-7933396
Length = 1357
Score = 29.1 bits (62), Expect = 0.46
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 32 PKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQNDTIII 80
P S+ +R + ++L EIRK + R + H E+ P+Q D ++
Sbjct: 638 PDLISLFEDQRIMKQDLEEIRKRLYRLESKEGFHMEEKDEPIQEDDQVV 686
>07_03_1137 -
24220597-24220619,24220694-24221414,24221513-24221731,
24221805-24222505,24223127-24223376
Length = 637
Score = 29.1 bits (62), Expect = 0.46
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 27 YLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQNDTIIIAIQV 84
YL VH ++SS ++ V + + +K +QR +A+ + VQ D ++ I +
Sbjct: 284 YLRVHGQDSSSSNKSAKVLYEMPKTKKHLQRYGQAEVPVKVGAFCRVQGDVVLECIHI 341
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.1 bits (62), Expect = 0.46
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 13 SEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSN 59
+EQ ++V L+ +T H S+ T A+ +N+TEI++ + N
Sbjct: 2007 AEQTDSVVTEMLNDEVTQHEPEDSIPRTTDAMVENITEIKEETEEEN 2053
>02_04_0240 -
21194597-21194743,21195579-21195680,21195797-21195875,
21195921-21196043,21196135-21196193,21196453-21196974,
21197434-21198177,21198426-21198506
Length = 618
Score = 28.3 bits (60), Expect = 0.80
Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 17 LALVPPELHKYLTVHPKNSSV-NSTERAVSKNLTEIRKAIQRSNEAQYIHN 66
+AL K++T HPK+S + NS++RA + + T++ +++RS ++N
Sbjct: 415 VALSNSTTQKFVTSHPKHSVMPNSSQRASTLHTTQV--SLKRSAGVSSVNN 463
>03_05_0243 - 22275425-22276402,22277192-22277307,22277434-22279012
Length = 890
Score = 27.5 bits (58), Expect = 1.4
Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Query: 8 NSNDTSEQVLALVPPEL--HKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIH 65
N + E+ ++ +PP K P S+ ++ + ++L EIRK + + H
Sbjct: 546 NQDFWKEKYISSLPPLFAEKKKKNEQPDLISLFEDQKIMKQDLEEIRKRLYMLESKEGFH 605
Query: 66 NEDIYGPVQNDTIII 80
E+ P+Q D ++
Sbjct: 606 MEEKDEPIQEDDHVV 620
>02_05_0938 +
32901143-32901215,32901841-32901982,32902243-32902314,
32902573-32902644,32902711-32902782,32902913-32902948,
32903001-32903072,32903319-32903387,32903483-32903554,
32903668-32903739,32903838-32903909,32904153-32904224,
32904470-32904541,32904623-32904694,32904782-32904853,
32904911-32905003,32905150-32905218,32905315-32905386,
32905479-32905552,32905643-32905771,32905966-32906331,
32906584-32906954,32907522-32907890
Length = 884
Score = 27.1 bits (57), Expect = 1.9
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 20 VPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYI 64
+PPEL T+H N + N+ E + N++ I + + Y+
Sbjct: 262 IPPELGNMSTLHYLNLANNNLEGPIPDNISSCMNLISLNLSSNYL 306
>08_02_0864 +
21994286-21994989,21996257-21996958,21997221-21997374,
21997494-21997838,21998323-21999240,21999312-21999640,
21999709-21999832,21999901-22000071,22000188-22001648,
22002647-22002910,22003866-22004189
Length = 1831
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 20 VPPELHKYLTVHPKNSSVNSTERAVSK 46
+PPE H Y VHP+ S S + K
Sbjct: 950 LPPEAHVYCYVHPQGSLTISVRKLAVK 976
>08_02_0592 +
19064025-19066596,19067036-19067084,19068530-19068605,
19068767-19068922
Length = 950
Score = 25.8 bits (54), Expect = 4.3
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 29 TVHPKNSSVNSTERAVSKNL---TEIR--KAIQRSNEAQYIHNEDIYGPVQNDTI 78
TV+P S+++ E AVS N IR +++ N +Q H E IY D +
Sbjct: 474 TVNPHESTISRHEAAVSANTAPEVSIRHFSSVKNGNTSQ--HEETIYASAAADVV 526
>01_06_0840 + 32343700-32344138,32345329-32345419,32345584-32345866,
32346023-32346097,32346470-32346514,32346889-32346979,
32347060-32347118,32347621-32347704,32348109-32348168,
32348585-32348637,32348724-32348757,32349334-32350335,
32350477-32351035,32351873-32352372,32352793-32353200
Length = 1260
Score = 25.8 bits (54), Expect = 4.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 30 VHPKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYG 71
+HP + + N + R S N I I R + YI N + G
Sbjct: 998 LHPHSCNFNLSFRKTSGNPLVIYDEITRGDGGMYIKNSSVVG 1039
>08_02_1187 - 25036023-25038443,25038636-25039939,25040033-25040135
Length = 1275
Score = 25.4 bits (53), Expect = 5.7
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 32 PKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQNDTIII 80
P S+ ++ + ++L EIRK + + H E+ P+Q D ++
Sbjct: 957 PDLISLFEDQKIMKQDLEEIRKRLYMLESKEGFHMEEKDEPIQEDDHVV 1005
>01_05_0645 - 23899579-23904483
Length = 1634
Score = 25.4 bits (53), Expect = 5.7
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 32 PKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQNDTIII 80
P S+ ++ + ++L EIRK + + H E+ P+Q D ++
Sbjct: 877 PDLISLFEDQKIMKQDLEEIRKRLYMLESKEGFHMEEKDEPIQEDDHVV 925
>11_01_0485 +
3728686-3728863,3729933-3730095,3730508-3730549,
3730833-3730927,3731273-3731334,3731416-3731507,
3731587-3731722,3731818-3731904,3732430-3732519,
3732969-3733071,3733616-3733716,3733837-3733971,
3734006-3734093,3734484-3734544,3734626-3734689,
3735219-3735347
Length = 541
Score = 25.0 bits (52), Expect = 7.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 33 KNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHN 66
+ SS NS +++ S + R A+Q ++HN
Sbjct: 220 RRSSANSRDKSQSAACPQCRTAVQSVGRNHFLHN 253
>10_03_0019 -
7123502-7123673,7124145-7124226,7124228-7124394,
7124569-7125182
Length = 344
Score = 25.0 bits (52), Expect = 7.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 30 VHPKNSSVNSTE--RAVSKNLTEIRKAIQRSNEAQYIHNEDI 69
+ P +S +ST R + T+ RK RSNE Y+HN +
Sbjct: 271 IRPGITSGSSTRQRRGFNNTRTQFRK---RSNETAYLHNGSV 309
>10_01_0099 - 1202668-1203023,1203097-1206037
Length = 1098
Score = 25.0 bits (52), Expect = 7.5
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 12 TSEQVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIR 52
+S V ++PPE+ + ++ N S N ++ L +R
Sbjct: 550 SSNHVNGVIPPEIGNLINLYSLNLSFNKLSGSIPSQLGNLR 590
>05_01_0318 -
2488529-2489196,2489773-2490372,2490620-2490773,
2490996-2491085,2491926-2492061,2492159-2492418,
2493448-2493846,2494482-2494661,2494728-2494922,
2496614-2496678,2497186-2497321,2497442-2497483,
2498351-2498689
Length = 1087
Score = 25.0 bits (52), Expect = 7.5
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 3 AEELMNSNDTSE-QVLALVPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAIQRSNEA 61
A + +N + S QVL E + + KN + ++ L I KA+QR +A
Sbjct: 325 ARQRINRMEKSRLQVLKAGDQEAYLRMVEESKNERLKLLLGKTNELLEGIGKAVQRQKDA 384
Query: 62 QYIHNED 68
+++ D
Sbjct: 385 EHVSRPD 391
>04_01_0126 -
1340540-1341376,1341437-1341900,1342105-1342156,
1342225-1342799,1343596-1343703,1345823-1346155,
1346783-1349306
Length = 1630
Score = 24.6 bits (51), Expect = 9.9
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 20 VPPELHKYLTVHPKNSSVNSTERAVSKNLTEIRKAI-QRSNEAQYIHNEDIYGPVQNDT 77
+PP LH +H S N V L + K + Q +H I + N T
Sbjct: 234 IPPSLHNITKIHSIRISHNFLTGKVPPGLQRLSKLVWYNIGFNQIVHTTSILDDLTNST 292
>02_02_0536 +
11304298-11304400,11304731-11305797,11306026-11306416,
11307164-11308041
Length = 812
Score = 24.6 bits (51), Expect = 9.9
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 32 PKNSSVNSTERAVSKNLTEIRKAIQRSNEAQYIHNEDIYGPVQNDTIII 80
P S+ ++ + ++L EIRK + + H E+ P+Q D ++
Sbjct: 622 PDLMSLFEDQKIMKQDLEEIRKRLYMLELKEGFHMEEKDEPIQEDDQVV 670
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.126 0.335
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,137,368
Number of Sequences: 37544
Number of extensions: 60126
Number of successful extensions: 153
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 141
Number of HSP's gapped (non-prelim): 17
length of query: 88
length of database: 14,793,348
effective HSP length: 67
effective length of query: 21
effective length of database: 12,277,900
effective search space: 257835900
effective search space used: 257835900
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 51 (24.6 bits)
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